Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 1.1e-78 296.6 154 100.0
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 1.2e-16 90.5 151 42.4
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 1.0e-15 87.4 106 47.2
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 5.1e-15 85.1 150 36.0
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 6.6e-15 84.7 123 39.8
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 6.6e-15 84.7 112 45.5
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 1.1e-14 84.0 108 43.5
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 4.3e-14 82.0 108 43.5
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 9.6e-14 80.9 110 43.6
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 1.3e-13 80.5 134 37.3
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 1.3e-13 80.5 108 44.4
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 1.6e-13 80.1 112 43.8
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 1.6e-13 80.1 110 42.7
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 6.2e-13 78.2 113 41.6
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 6.2e-13 78.2 113 39.8
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 1.4e-12 77.0 108 39.8
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 1.8e-12 76.6 113 40.7
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 5.8e-11 71.6 111 39.6
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 5.8e-11 71.6 111 37.8
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 7.6e-11 71.2 115 36.5
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 9.9e-11 70.9 108 39.8
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 1.1e-09 67.4 138 34.8
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 2.4e-09 66.2 111 39.6
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 1.2e-08 63.9 111 35.1
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 2.7e-08 62.8 106 36.8
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 7.9e-08 61.2 109 37.6
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 1.3e-07 60.5 101 36.6
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.5e-06 57.0 101 38.6
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 3.3e-06 55.8 103 34.0


User provided reference genes

Program Settings