Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 1.3e-188 662.9 334 100.0
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 3.8e-31 139.8 332 35.2
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 1.8e-28 131.0 334 33.8
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 9.0e-25 118.6 286 35.3
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 1.4e-22 111.3 326 33.7
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 2.5e-22 110.5 315 33.3
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 2.1e-21 107.5 259 32.8
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 3.9e-20 103.2 299 33.4
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 1.5e-19 101.3 268 32.8
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 7.4e-19 99.0 308 31.2
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 6.3e-18 95.9 304 31.6
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 1.1e-17 95.1 252 32.5
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 2.4e-17 94.0 324 29.6
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 3.1e-17 93.6 252 32.5
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 5.3e-17 92.8 291 31.3
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 5.3e-17 92.8 217 32.7
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 2.6e-16 90.5 266 30.8
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 5.9e-16 89.4 267 31.5
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 1.0e-15 88.6 309 31.1
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 2.9e-15 87.0 219 32.4
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 3.8e-15 86.7 261 33.0
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.1e-14 85.1 269 29.7
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.2e-13 81.6 293 28.7
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 1.2e-13 81.6 293 28.7
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 3.6e-13 80.1 277 29.6
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 3.6e-13 80.1 253 29.6
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 3.6e-13 80.1 282 30.1
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 3.9e-12 76.6 268 26.9
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 3.9e-12 76.6 277 27.8
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 1.9e-11 74.3 197 29.4
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 4.3e-11 73.2 309 26.9
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 4.3e-11 73.2 309 26.9
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 5.7e-11 72.8 357 26.1
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 9.7e-11 72.0 190 30.5
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 1.3e-10 71.6 278 29.9
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 2.8e-10 70.5 197 27.9
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 8.2e-10 68.9 303 28.7
Sed0015774 Sechium edule HOM05D008235 ORTHO05D009358 8.2e-10 68.9 266 28.6
MELO3C017713.2 Cucumis melo HOM05D008235 ORTHO05D009358 1.1e-09 68.6 267 27.7
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 9.1e-09 65.5 259 28.2
Aqoxy2G04121 Aquilegia oxysepala HOM05D008235 ORTHO05D009358 1.5e-08 64.7 77 49.4
PSO017G5357 Papaver somniferum HOM05D066249 ORTHO05D009358 5.9e-08 62.8 83 42.2
THA.LOC104803712 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 5.9e-08 62.8 184 29.9
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 1.0e-07 62.0 300 27.3
PSO675G1581 Papaver somniferum HOM05D066249 ORTHO05D009358 1.0e-07 62.0 141 34.0
Ah.13g072860 Amaranthus hybridus HOM05D019141 ORTHO05D009358 3.8e-07 60.1 68 45.6
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 3.8e-07 60.1 291 24.1
EL10Ac3g05943 Beta vulgaris HOM05D019141 ORTHO05D009358 5.0e-07 59.7 57 50.9
AUR62015381 Chenopodium quinoa HOM05D019141 ORTHO05D009358 5.0e-07 59.7 59 50.8
THA.LOC104800392 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 5.0e-07 59.7 268 28.0
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 6.5e-07 59.3 66 42.4
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 1.1e-06 58.5 317 26.5
Psat7g208600 Pisum sativum HOM05D008235 ORTHO05D009358 1.1e-06 58.5 90 37.8
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 1.4e-06 58.2 310 27.4
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 2.5e-06 57.4 204 27.5
Phvul.005G153000 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 2.5e-06 57.4 58 50.0
Aa31LG1G25120 Aethionema arabicum HOM05D009929 ORTHO05D006942 4.2e-06 56.6 177 30.5
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 4.2e-06 56.6 204 25.0
ATR0824G133 Amborella trichopoda HOM05D008235 ORTHO05D009358 5.5e-06 56.2 87 41.4
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 5.5e-06 56.2 310 25.8
BcaC07g40472 Brassica carinata HOM05D009929 ORTHO05D009358 5.5e-06 56.2 144 29.2
Cpa.g.sc9.283 Carica papaya HOM05D008235 ORTHO05D009358 9.4e-06 55.5 86 37.2
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 9.4e-06 55.5 168 30.4
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 9.4e-06 55.5 168 30.4


User provided reference genes

Program Settings