Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.7e-219 765.8 394 100.0
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 5.7e-212 740.7 394 95.4
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 4.9e-171 604.7 362 81.8
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 6.4e-171 604.4 366 81.1
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 9.2e-170 600.5 381 78.2
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 2.1e-169 599.4 349 83.7
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 2.1e-169 599.4 391 76.2
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.3e-168 595.9 384 78.4
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 3.9e-168 595.1 353 81.6
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 5.1e-168 594.7 353 83.3
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 5.1e-168 594.7 353 82.7
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 6.6e-168 594.3 384 78.4
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 8.6e-168 594.0 353 81.9
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 1.1e-167 593.6 354 81.1
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.5e-167 593.2 353 81.0
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.5e-167 593.2 353 82.2
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.3e-167 592.0 380 77.4
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 5.6e-167 591.3 355 80.8
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 7.3e-167 590.9 375 78.1
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 9.5e-167 590.5 381 78.0
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 9.5e-167 590.5 381 77.4
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 1.2e-166 590.1 361 80.1
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 1.6e-166 589.7 378 79.4
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.1e-166 589.3 353 81.6
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 2.8e-166 589.0 376 78.2
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 3.6e-166 588.6 384 76.8
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 4.7e-166 588.2 392 75.0
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 6.2e-166 587.8 385 76.9
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.1e-165 587.0 361 80.9
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 1.8e-165 586.3 369 78.6
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 1.8e-165 586.3 353 81.0
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 6.8e-165 584.3 353 80.5
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 6.8e-165 584.3 392 75.3
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 8.9e-165 583.9 353 79.9
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 8.9e-165 583.9 392 75.5
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.5e-164 583.2 353 82.2
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 3.4e-164 582.0 353 80.7
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 3.4e-164 582.0 353 80.7
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 7.6e-164 580.9 390 74.6
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 9.9e-164 580.5 359 79.7
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 1.3e-163 580.1 358 78.5
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 3.8e-163 578.6 386 74.6
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 3.8e-163 578.6 365 77.8
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 6.4e-163 577.8 359 79.4
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 6.4e-163 577.8 353 80.5
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 8.4e-163 577.4 353 79.9
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.1e-162 577.0 345 81.2
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 1.4e-162 576.6 353 79.3
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.9e-162 576.2 353 79.6
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.9e-162 576.2 381 76.4
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 2.4e-162 575.9 392 73.7
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 2.4e-162 575.9 353 79.9
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 3.2e-162 575.5 361 77.6
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 4.1e-162 575.1 387 73.1
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 5.4e-162 574.7 386 73.8
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 7.1e-162 574.3 373 77.2
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 7.1e-162 574.3 369 77.0
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 7.1e-162 574.3 352 78.7
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 9.2e-162 573.9 360 79.2
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 9.2e-162 573.9 353 78.8
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 9.2e-162 573.9 353 79.6
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 9.2e-162 573.9 365 76.4
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 9.2e-162 573.9 351 79.5
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.6e-161 573.2 353 79.3
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 2.7e-161 572.4 390 72.6
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 3.5e-161 572.0 353 79.3
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 7.8e-161 570.9 359 78.6
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 7.8e-161 570.9 373 75.6
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.0e-160 570.5 353 78.5
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.3e-160 570.1 393 73.8
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.7e-160 569.7 391 73.7
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.7e-160 569.7 353 79.3
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.3e-160 569.3 386 73.8
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 2.3e-160 569.3 393 73.8
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 3.0e-160 568.9 389 74.0
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 6.6e-160 567.8 368 78.0
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 8.6e-160 567.4 377 74.0
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.5e-159 566.6 353 77.3
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 1.9e-159 566.2 349 79.1
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 5.6e-159 564.7 402 70.6
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 5.6e-159 564.7 388 72.2
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.6e-158 563.1 403 71.5
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.6e-158 563.1 335 81.8
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.6e-158 563.1 421 70.5
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 6.2e-158 561.2 362 76.5
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.1e-157 560.5 402 71.1
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 1.4e-157 560.1 355 78.0
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.4e-157 560.1 352 78.1
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.4e-156 555.1 337 79.8
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 4.4e-156 555.1 337 80.1
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.7e-155 553.1 375 73.6
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.9e-155 551.6 337 78.9
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 8.4e-155 550.8 327 82.0
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.6e-153 546.6 362 74.0
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 6.0e-153 544.7 356 75.0
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 1.5e-151 540.0 358 73.7
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.9e-146 523.1 336 77.1
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 2.4e-146 522.7 336 77.1
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 5.3e-141 505.0 392 65.8
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 2.6e-140 502.7 349 72.2
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 2.2e-139 499.6 353 72.0
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.1e-138 497.3 337 71.2
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.4e-138 496.9 357 68.9
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.9e-136 488.8 385 67.3
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 3.2e-130 469.2 341 67.4
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 7.4e-127 458.0 385 65.2
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.2e-123 446.4 365 64.1
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.9e-120 435.6 386 61.1
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 1.7e-118 430.3 337 61.7
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.0e-111 406.8 274 75.9
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 7.4e-111 404.8 384 55.5
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 7.7e-108 394.8 271 74.2
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.2e-105 387.5 247 78.5
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 6.1e-105 385.2 340 55.3
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 8.0e-105 384.8 254 76.0
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 4.4e-103 379.0 269 71.4
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 2.8e-102 376.3 335 57.6
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.5e-92 342.8 384 47.4
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 4.6e-68 262.7 295 46.1
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.1e-66 258.1 180 72.2
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.9e-61 240.7 203 61.6
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.7e-59 234.2 198 63.1
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 1.1e-48 198.4 175 61.1
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.3e-46 191.4 139 72.7
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 3.4e-15 87.0 60 75.0
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 4.2e-13 80.1 98 50.0
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 4.2e-13 80.1 98 50.0
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.7e-06 58.2 43 67.4


User provided reference genes

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