Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00032 Eucalyptus grandis HOM05D001620 ORTHO05D005461 6.3e-157 557.4 279 100.0
Eucgr.A00034 Eucalyptus grandis HOM05D001620 ORTHO05D005461 1.9e-52 210.3 235 55.3
Eucgr.A00027 Eucalyptus grandis HOM05D001620 ORTHO05D005461 1.7e-37 160.6 155 61.9
Dinv44168 Davidia involucrata HOM05D001620 ORTHO05D005461 4.1e-31 139.4 216 41.2
Ciclev10021852m.g Citrus clementina HOM05D001620 ORTHO05D005461 8.6e-29 131.7 235 37.0
Thecc.04G171200 Theobroma cacao HOM05D001620 ORTHO05D005461 1.6e-27 127.5 190 41.6
Lsat_1_v5_gn_3_109820 Lactuca sativa HOM05D001620 ORTHO05D005461 7.5e-25 118.6 111 50.5
Prupe.1G201600 Prunus persica HOM05D001620 ORTHO05D005461 9.8e-25 118.2 231 36.4
COL.COLO4_28387 Corchorus olitorius HOM05D001620 ORTHO05D005461 1.3e-24 117.9 171 40.4
ECA240G4634 Erigeron canadensis HOM05D001620 ORTHO05D005461 1.3e-24 117.9 103 55.3
Sopen11g020680 Solanum pennellii HOM05D001620 ORTHO05D005461 3.7e-24 116.3 227 35.7
Migut.N03083 Erythranthe guttata HOM05D001620 ORTHO05D005461 4.9e-24 115.9 235 31.9
Sc19g0002780 Simmondsia chinensis HOM05D001620 ORTHO05D005461 6.4e-24 115.5 247 36.8
Solyc11g045220.2 Solanum lycopersicum HOM05D001620 ORTHO05D005461 6.4e-24 115.5 209 37.3
SGA_v2.0_scaffold25G10993 Striga asiatica HOM05D001620 ORTHO05D005461 1.1e-23 114.8 109 49.5
PGSC0003DMG400022873 Solanum tuberosum HOM05D001620 ORTHO05D005461 1.9e-23 114.0 209 36.8
unitig_85.g27224 Utricularia gibba HOM05D004939 ORTHO05D005843 4.1e-23 112.8 103 51.5
Haze_01411 Corylus avellana HOM05D001620 ORTHO05D005461 9.2e-23 111.7 99 55.6
Haze_12936 Corylus avellana HOM05D001620 ORTHO05D005461 9.2e-23 111.7 99 55.6
Cc00_g03540 Coffea canephora HOM05D001620 ORTHO05D005461 1.6e-22 110.9 111 48.6
Hund03188 Selenicereus undatus HOM05D001620 ORTHO05D005461 3.5e-22 109.8 96 56.2
Potri.007G134300 Populus trichocarpa HOM05D001620 ORTHO05D005461 1.7e-21 107.5 236 33.9
MSTRG.22018 Avicennia marina HOM05D001620 ORTHO05D005461 3.9e-21 106.3 241 32.4
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 3.9e-21 106.3 197 35.0
SalBow6G2343 Salvia bowleyana HOM05D001620 ORTHO05D005461 3.9e-21 106.3 205 35.1
Cc03_g12150 Coffea canephora HOM05D001620 ORTHO05D005461 1.2e-19 101.3 99 49.5
Glyma.15G269900 Glycine max HOM05D001620 ORTHO05D005461 1.6e-19 100.9 113 46.0
Peaxi162Scf00126g00627 Petunia axillaris HOM05D001620 ORTHO05D005461 2.8e-19 100.1 128 40.6
Nitab4.5_0001481g0050 Nicotiana tabacum HOM05D001620 ORTHO05D005461 3.6e-19 99.8 202 31.7
arahy.Tifrunner.gnm1.ann1.G0W8DL Arachis hypogaea HOM05D001620 ORTHO05D005461 4.7e-19 99.4 113 42.5
Oeu015935.2 Olea europaea HOM05D001620 ORTHO05D005461 4.7e-19 99.4 99 49.5
Phvul.005G155600 Phaseolus vulgaris HOM05D001620 ORTHO05D005461 2.3e-18 97.1 114 43.0
ClCG07G015080 Citrullus lanatus HOM05D001620 ORTHO05D005461 6.8e-18 95.5 102 49.0
TPR.G22628 Trifolium pratense HOM05D001620 ORTHO05D005461 7.5e-17 92.0 111 40.5
Medtr2g099410 Medicago truncatula HOM05D001620 ORTHO05D005461 1.7e-16 90.9 104 43.3
Gohir.A02G092600 Gossypium hirsutum HOM05D001620 ORTHO05D005461 2.9e-16 90.1 214 29.9
Nitab4.5_0002421g0040 Nicotiana tabacum HOM05D001620 ORTHO05D005461 1.9e-15 87.4 223 28.7
Dinv25389 Davidia involucrata HOM05D001620 ORTHO05D005461 3.2e-15 86.7 76 59.2
MD04G1047000 Malus domestica HOM05D001620 ORTHO05D005461 5.4e-15 85.9 232 33.2
Psat5g291680 Pisum sativum HOM05D001620 ORTHO05D005461 2.1e-14 84.0 113 39.8
Gorai.005G125600 Gossypium raimondii HOM05D001620 ORTHO05D005461 7.8e-14 82.0 220 27.7
SEGI_06390 Sequoiadendron giganteum HOM05D001620 ORTHO05D005461 1.1e-12 78.2 104 41.3
Lj3g0024858 Lotus japonicus HOM05D001620 ORTHO05D005461 4.3e-12 76.3 111 36.0
Atru.chr4.1349 Acer truncatum HOM05D001620 ORTHO05D005461 9.5e-12 75.1 106 37.7
MBI17_g25734_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 1.2e-11 74.7 87 46.0
CDE02G0743 Ceratophyllum demersum HOM05D001620 ORTHO05D005461 1.6e-11 74.3 87 41.4
HPP92_013691 Vanilla planifolia HOM05D001620 ORTHO05D005461 1.6e-11 74.3 220 27.7
Cc03_g11940 Coffea canephora HOM05D001620 ORTHO05D005461 2.1e-11 73.9 237 28.3
PGR014G0005 Punica granatum HOM05D001620 ORTHO05D005461 3.6e-11 73.2 236 30.1
PGR083G0805 Punica granatum HOM05D001620 ORTHO05D005461 3.6e-11 73.2 236 30.1
GSVIVG01038096001 Vitis vinifera HOM05D001620 ORTHO05D005461 3.6e-11 73.2 238 29.4
Gohir.D02G110700 Gossypium hirsutum HOM05D001620 ORTHO05D005461 6.2e-11 72.4 211 26.1
arahy.Tifrunner.gnm1.ann1.UZY3CQ Arachis hypogaea HOM05D001620 ORTHO05D005461 1.1e-10 71.6 106 34.9
CiPaw.01G173100 Carya illinoinensis HOM05D001620 ORTHO05D005461 3.1e-10 70.1 207 28.0
Cfa015222 Carpinus fangiana HOM05D001620 ORTHO05D005461 5.2e-10 69.3 216 28.7
Cpa.g.sc9.334 Carica papaya HOM05D001620 ORTHO05D005461 1.2e-09 68.2 214 26.6
HanXRQChr13g0419631 Helianthus annuus HOM05D001620 ORTHO05D005461 3.4e-09 66.6 165 30.3
MBI07_g02902_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 7.6e-09 65.5 231 27.7
Sabra07G0109000 Salix brachista HOM05D001620 ORTHO05D005461 2.9e-08 63.5 235 27.7
Haze_01414 Corylus avellana HOM05D001620 ORTHO05D005461 1.9e-07 60.8 99 34.3
QL10p052582 Quercus lobata HOM05D001620 ORTHO05D005461 1.9e-07 60.8 210 26.7
PSO675G0461 Papaver somniferum HOM05D001620 ORTHO05D005461 3.2e-07 60.1 254 24.4
CANSAT54G0752 Cannabis sativa HOM05D001620 ORTHO05D005461 4.1e-07 59.7 215 27.9
EL10Ac3g06031 Beta vulgaris HOM05D001620 ORTHO05D005461 9.2e-07 58.5 217 26.7
Duzib212G0571 Durio zibethinus HOM05D001620 ORTHO05D005461 1.2e-06 58.2 238 27.3
ATR0743G190 Amborella trichopoda HOM05D001620 ORTHO05D005461 2.1e-06 57.4 236 27.5
TAR365G0548 Trochodendron aralioides HOM05D001620 ORTHO05D005461 7.8e-06 55.5 211 26.1


User provided reference genes

Program Settings