Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00027 Eucalyptus grandis HOM05D001620 ORTHO05D005461 2.9e-61 238.8 161 100.0
Eucgr.A00032 Eucalyptus grandis HOM05D001620 ORTHO05D005461 7.6e-38 161.0 155 61.9
Eucgr.A00034 Eucalyptus grandis HOM05D001620 ORTHO05D005461 1.2e-35 153.7 135 64.4
Dinv44168 Davidia involucrata HOM05D001620 ORTHO05D005461 7.7e-22 107.8 135 43.7
Ciclev10021852m.g Citrus clementina HOM05D001620 ORTHO05D005461 1.1e-20 104.0 133 43.6
ECA240G4634 Erigeron canadensis HOM05D001620 ORTHO05D005461 1.4e-20 103.6 130 43.1
Haze_12936 Corylus avellana HOM05D001620 ORTHO05D005461 1.9e-20 103.2 138 41.3
unitig_85.g27224 Utricularia gibba HOM05D004939 ORTHO05D005843 2.5e-20 102.8 135 40.0
Lsat_1_v5_gn_3_109820 Lactuca sativa HOM05D001620 ORTHO05D005461 5.5e-20 101.7 135 40.0
Haze_01411 Corylus avellana HOM05D001620 ORTHO05D005461 7.2e-20 101.3 149 39.6
Prupe.1G201600 Prunus persica HOM05D001620 ORTHO05D005461 6.1e-19 98.2 134 40.3
Hund03188 Selenicereus undatus HOM05D001620 ORTHO05D005461 6.1e-19 98.2 135 40.0
Sc19g0002780 Simmondsia chinensis HOM05D001620 ORTHO05D005461 6.1e-19 98.2 135 40.0
SalBow6G2343 Salvia bowleyana HOM05D001620 ORTHO05D005461 1.4e-18 97.1 136 38.2
Potri.007G134300 Populus trichocarpa HOM05D001620 ORTHO05D005461 1.8e-18 96.7 135 42.2
SGA_v2.0_scaffold25G10993 Striga asiatica HOM05D001620 ORTHO05D005461 2.3e-18 96.3 135 38.5
ClCG07G015080 Citrullus lanatus HOM05D001620 ORTHO05D005461 1.5e-17 93.6 136 39.7
PGSC0003DMG400022873 Solanum tuberosum HOM05D001620 ORTHO05D005461 2.0e-17 93.2 130 38.5
Solyc11g045220.2 Solanum lycopersicum HOM05D001620 ORTHO05D005461 3.3e-17 92.4 130 38.5
Sopen11g020680 Solanum pennellii HOM05D001620 ORTHO05D005461 3.3e-17 92.4 130 38.5
Thecc.04G171200 Theobroma cacao HOM05D001620 ORTHO05D005461 4.4e-17 92.0 134 39.6
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 5.7e-17 91.7 132 37.9
Oeu015935.2 Olea europaea HOM05D001620 ORTHO05D005461 1.3e-16 90.5 133 38.3
Cc03_g12150 Coffea canephora HOM05D001620 ORTHO05D005461 1.7e-16 90.1 135 37.0
Migut.N03083 Erythranthe guttata HOM05D001620 ORTHO05D005461 1.7e-16 90.1 135 37.0
MSTRG.22018 Avicennia marina HOM05D001620 ORTHO05D005461 4.8e-16 88.6 144 36.1
Cc00_g03540 Coffea canephora HOM05D001620 ORTHO05D005461 6.3e-16 88.2 134 36.6
arahy.Tifrunner.gnm1.ann1.G0W8DL Arachis hypogaea HOM05D001620 ORTHO05D005461 8.2e-16 87.8 148 34.5
Nitab4.5_0001481g0050 Nicotiana tabacum HOM05D001620 ORTHO05D005461 1.4e-15 87.0 131 35.1
Peaxi162Scf00126g00627 Petunia axillaris HOM05D001620 ORTHO05D005461 1.2e-14 84.0 131 48.9
COL.COLO4_28387 Corchorus olitorius HOM05D001620 ORTHO05D005461 2.0e-14 83.2 137 38.0
Glyma.15G269900 Glycine max HOM05D001620 ORTHO05D005461 5.9e-14 81.6 133 35.3
Dinv25389 Davidia involucrata HOM05D001620 ORTHO05D005461 2.5e-12 76.3 115 40.9
Nitab4.5_0002421g0040 Nicotiana tabacum HOM05D001620 ORTHO05D005461 7.2e-12 74.7 131 38.2
Phvul.005G155600 Phaseolus vulgaris HOM05D001620 ORTHO05D005461 9.4e-12 74.3 135 33.3
TPR.G22628 Trifolium pratense HOM05D001620 ORTHO05D005461 2.7e-11 72.8 134 32.8
MD04G1047000 Malus domestica HOM05D001620 ORTHO05D005461 8.0e-11 71.2 134 43.3
Medtr2g099410 Medicago truncatula HOM05D001620 ORTHO05D005461 2.3e-10 69.7 134 32.1
Psat5g291680 Pisum sativum HOM05D001620 ORTHO05D005461 3.9e-10 68.9 133 32.3
HanXRQChr13g0419631 Helianthus annuus HOM05D001620 ORTHO05D005461 8.8e-10 67.8 162 48.1
Lj3g0024858 Lotus japonicus HOM05D001620 ORTHO05D005461 3.7e-08 62.4 136 36.0
CDE02G0743 Ceratophyllum demersum HOM05D001620 ORTHO05D005461 1.4e-07 60.5 127 29.9
SEGI_06390 Sequoiadendron giganteum HOM05D001620 ORTHO05D005461 1.8e-07 60.1 112 33.9
HPP92_013691 Vanilla planifolia HOM05D001620 ORTHO05D005461 2.4e-07 59.7 131 38.9
Atru.chr4.1349 Acer truncatum HOM05D001620 ORTHO05D005461 3.1e-07 59.3 133 39.1
Cfa015222 Carpinus fangiana HOM05D001620 ORTHO05D005461 3.1e-07 59.3 141 53.2
EL10Ac3g06031 Beta vulgaris HOM05D001620 ORTHO05D005461 4.1e-07 58.9 133 53.4
MBI17_g25734_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 4.1e-07 58.9 119 33.6
arahy.Tifrunner.gnm1.ann1.UZY3CQ Arachis hypogaea HOM05D001620 ORTHO05D005461 5.3e-07 58.5 134 37.3
TAR365G0548 Trochodendron aralioides HOM05D001620 ORTHO05D005461 5.3e-07 58.5 46 58.7
Gohir.A02G092600 Gossypium hirsutum HOM05D001620 ORTHO05D005461 7.0e-07 58.2 134 38.8
Haze_01414 Corylus avellana HOM05D001620 ORTHO05D005461 9.1e-07 57.8 136 46.3
QL10p052582 Quercus lobata HOM05D001620 ORTHO05D005461 2.6e-06 56.2 49 55.1
AUR62002366 Chenopodium quinoa HOM05D001620 ORTHO05D005461 5.9e-06 55.1 123 52.0
AUR62023819 Chenopodium quinoa HOM05D001620 ORTHO05D005461 7.7e-06 54.7 132 52.3
MBI07_g02902_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 7.7e-06 54.7 46 52.2
Sabra07G0109000 Salix brachista HOM05D001620 ORTHO05D005461 7.7e-06 54.7 132 53.0


User provided reference genes

Program Settings