Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.9e-71 272.3 129 100.0
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 6.9e-58 227.3 124 85.5
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 8.2e-51 203.8 129 74.4
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.6e-46 189.5 121 71.1
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.4e-45 186.4 129 69.0
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 5.7e-44 181.0 129 63.6
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 1.7e-43 179.5 128 67.2
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 2.2e-43 179.1 120 68.3
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 3.7e-43 178.3 121 66.1
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 3.7e-43 178.3 128 68.0
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 6.3e-43 177.6 125 65.6
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.8e-42 176.0 121 66.9
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 3.1e-42 175.3 121 66.9
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 5.3e-42 174.5 118 67.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.2e-41 173.3 119 65.5
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.2e-41 173.3 118 66.1
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.6e-41 172.9 131 62.6
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 1.6e-41 172.9 118 67.8
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 2.0e-41 172.6 117 66.7
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.0e-41 172.6 131 61.8
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 2.0e-41 172.6 117 65.8
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 2.0e-41 172.6 129 62.8
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.7e-41 172.2 124 67.7
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 3.5e-41 171.8 118 64.4
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 4.5e-41 171.4 128 60.2
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 5.9e-41 171.0 117 66.7
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 7.7e-41 170.6 125 64.0
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 7.7e-41 170.6 126 61.9
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 7.7e-41 170.6 120 63.3
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.0e-40 170.2 129 62.0
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.0e-40 170.2 120 64.2
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 2.9e-40 168.7 120 64.2
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 5.0e-40 167.9 127 62.2
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 5.0e-40 167.9 120 63.3
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 5.0e-40 167.9 123 61.0
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 6.5e-40 167.5 116 65.5
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 6.5e-40 167.5 117 63.2
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 8.5e-40 167.2 118 63.6
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 8.5e-40 167.2 118 63.6
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 8.5e-40 167.2 118 63.6
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.1e-39 166.8 118 66.9
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 1.5e-39 166.4 116 63.8
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.5e-39 166.4 118 62.7
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.5e-39 166.4 117 64.1
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 1.9e-39 166.0 133 60.9
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.5e-39 165.6 120 64.2
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.5e-39 165.6 119 63.0
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 2.5e-39 165.6 124 61.3
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 2.5e-39 165.6 120 63.3
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.2e-39 165.2 118 61.9
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 5.5e-39 164.5 127 62.2
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 7.2e-39 164.1 120 61.7
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 7.2e-39 164.1 120 60.8
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 9.4e-39 163.7 130 60.8
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 9.4e-39 163.7 117 65.0
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.1e-38 162.5 120 60.8
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.1e-38 162.5 118 61.9
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 3.6e-38 161.8 120 62.5
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 3.6e-38 161.8 116 61.2
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 8.0e-38 160.6 118 59.3
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 1.0e-37 160.2 119 59.7
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.4e-37 159.8 119 59.7
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 1.4e-37 159.8 128 59.4
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 3.0e-37 158.7 117 62.4
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 4.0e-37 158.3 119 61.3
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 6.8e-37 157.5 119 58.8
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 6.8e-37 157.5 124 59.7
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.2e-36 156.8 129 56.6
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.5e-36 156.4 121 57.9
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 2.0e-36 156.0 120 62.5
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 2.6e-36 155.6 117 58.1
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 6.3e-35 151.0 126 56.3
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 1.1e-34 150.2 117 61.5
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 3.1e-34 148.7 141 52.5
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 3.1e-34 148.7 121 59.5
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.6e-33 146.4 109 63.3
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 3.5e-33 145.2 117 58.1
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 2.9e-32 142.1 108 61.1
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.8e-32 141.7 148 47.3
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 2.8e-30 135.6 123 52.0
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 4.7e-30 134.8 114 57.0
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.2e-28 130.2 104 57.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 3.4e-28 128.6 120 52.5
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 5.0e-24 114.8 121 49.6
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 5.0e-24 114.8 79 63.3
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 7.3e-23 110.9 81 61.7
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.0e-22 107.5 80 60.0
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 9.8e-20 100.5 114 43.0
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 2.0e-17 92.8 59 67.8
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 4.3e-15 85.1 77 54.5
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.6e-14 83.2 75 54.7
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.8e-13 79.7 104 42.3
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 5.2e-13 78.2 102 43.1
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.9e-07 59.7 90 35.6
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 2.5e-07 59.3 92 41.3


User provided reference genes

Program Settings