Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 3.1e-85 318.5 174 100.0
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 3.2e-66 255.4 179 72.1
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.5e-42 176.8 173 57.2
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 9.4e-42 174.1 169 57.4
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 3.0e-32 142.5 180 48.9
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 8.8e-32 141.0 169 50.9
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 8.8e-32 141.0 161 55.9
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.5e-31 140.2 170 50.6
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 7.5e-31 137.9 175 50.3
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 9.8e-31 137.5 178 48.3
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.7e-30 136.7 166 48.8
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 1.7e-30 136.7 176 48.9
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 2.8e-30 136.0 172 49.4
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 4.8e-30 135.2 167 47.3
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 8.3e-30 134.4 167 48.5
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.2e-28 130.6 161 49.1
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.6e-28 130.2 168 48.8
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 1.6e-28 130.2 169 48.5
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 2.0e-28 129.8 179 44.7
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.7e-28 129.4 176 46.6
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.7e-28 129.4 176 46.6
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.7e-28 129.4 176 46.6
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 3.5e-28 129.0 178 45.5
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 4.5e-28 128.6 179 48.0
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 4.5e-28 128.6 173 48.0
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.3e-27 127.1 179 49.2
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.3e-27 127.1 178 46.1
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.3e-27 127.1 173 47.4
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.9e-27 125.9 180 46.1
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.9e-27 125.9 177 48.0
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.0e-27 125.2 166 45.8
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 5.0e-27 125.2 184 46.2
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 6.5e-27 124.8 176 47.7
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 6.5e-27 124.8 171 46.8
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 8.6e-27 124.4 174 48.9
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 8.6e-27 124.4 181 47.0
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 8.6e-27 124.4 175 52.6
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 8.6e-27 124.4 186 43.5
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 8.6e-27 124.4 171 47.4
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.1e-26 124.0 180 48.3
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 1.1e-26 124.0 193 40.9
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.1e-26 124.0 172 43.6
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 1.5e-26 123.6 180 43.9
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.9e-26 123.2 185 43.8
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 2.5e-26 122.9 177 45.2
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 2.5e-26 122.9 167 45.5
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 3.3e-26 122.5 183 43.7
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.3e-26 122.5 169 45.0
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.3e-26 122.5 204 40.2
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 3.3e-26 122.5 170 46.5
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 3.3e-26 122.5 171 45.0
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 4.2e-26 122.1 183 44.8
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.2e-26 122.1 194 44.8
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 4.2e-26 122.1 185 44.9
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 4.2e-26 122.1 183 44.8
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 5.5e-26 121.7 173 46.8
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 5.5e-26 121.7 163 47.2
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 5.5e-26 121.7 177 51.4
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 7.2e-26 121.3 167 45.5
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 7.2e-26 121.3 177 42.4
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 9.5e-26 120.9 170 48.8
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 9.5e-26 120.9 177 45.2
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 9.5e-26 120.9 177 45.2
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.5e-26 120.9 176 43.8
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 9.5e-26 120.9 181 47.0
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 1.2e-25 120.6 175 49.1
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 1.6e-25 120.2 175 49.7
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.6e-25 120.2 202 41.1
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 1.6e-25 120.2 164 50.6
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 2.8e-25 119.4 169 49.1
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 4.7e-25 118.6 183 45.9
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 6.1e-25 118.2 157 47.8
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 6.1e-25 118.2 171 45.0
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 6.1e-25 118.2 179 44.1
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 1.0e-24 117.5 176 40.3
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.0e-24 117.5 197 41.6
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 1.0e-24 117.5 181 44.2
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.4e-24 117.1 176 47.7
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.4e-24 117.1 173 46.8
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 1.4e-24 117.1 199 40.2
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.4e-24 117.1 199 40.2
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.4e-24 117.1 203 39.9
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.4e-24 117.1 171 45.0
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 1.8e-24 116.7 181 43.1
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 1.8e-24 116.7 183 42.1
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 1.8e-24 116.7 164 40.9
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 3.0e-24 115.9 177 42.4
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 3.0e-24 115.9 183 45.4
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 3.0e-24 115.9 166 42.8
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 3.0e-24 115.9 181 43.6
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 4.0e-24 115.5 179 43.6
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 4.0e-24 115.5 179 44.1
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 4.0e-24 115.5 179 44.1
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 4.0e-24 115.5 179 43.6
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 4.0e-24 115.5 158 44.9
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 4.0e-24 115.5 182 43.4
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 4.0e-24 115.5 167 45.5
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 4.0e-24 115.5 177 41.8
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 5.2e-24 115.2 159 47.2
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 6.8e-24 114.8 167 45.5
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.2e-23 114.0 176 47.2
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.2e-23 114.0 176 47.2
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.2e-23 114.0 176 47.2
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.2e-23 114.0 170 45.9
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.5e-23 113.6 161 49.1
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.6e-23 112.8 185 43.8
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 2.6e-23 112.8 162 45.1
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 4.4e-23 112.1 167 43.7
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.5e-23 111.3 182 44.0
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 9.8e-23 110.9 173 46.2
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 9.8e-23 110.9 179 41.9
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.3e-22 110.5 173 41.6
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 1.7e-22 110.2 166 45.8
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.2e-22 109.8 173 42.8
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 2.2e-22 109.8 175 40.6
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 3.7e-22 109.0 157 45.9
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.7e-22 109.0 182 43.4
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 4.9e-22 108.6 195 45.1
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 8.3e-22 107.8 206 40.8
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.3e-22 107.8 167 43.1
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.3e-22 107.8 167 43.1
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 1.1e-21 107.5 181 40.3
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-21 106.7 157 44.6
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.8e-21 106.7 174 43.7
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 3.1e-21 105.9 178 42.1
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.1e-21 105.5 173 42.8
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 2.0e-20 103.2 171 41.5
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 3.5e-20 102.4 182 41.2
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 4.5e-20 102.1 169 40.8
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 4.5e-20 102.1 174 41.4
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 5.9e-20 101.7 169 42.6
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.3e-19 100.5 167 42.5
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 1.7e-19 100.1 185 42.2
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 3.8e-19 99.0 167 42.5
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 6.6e-19 98.2 162 42.0
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 6.6e-19 98.2 203 36.9
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-18 96.7 175 40.6
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 2.5e-18 96.3 165 41.2
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 3.3e-18 95.9 164 39.6
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 2.8e-17 92.8 175 41.1
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 2.8e-17 92.8 165 39.4
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 6.1e-17 91.7 162 38.9
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 8.0e-17 91.3 171 41.5
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-16 89.7 162 37.0
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 5.2e-16 88.6 116 47.4
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-15 86.7 139 40.3
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 7.5e-15 84.7 209 36.4
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.3e-14 84.0 174 34.5
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 2.2e-14 83.2 164 36.6
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 4.9e-14 82.0 119 42.0
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 6.4e-14 81.6 166 41.6
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.8e-13 80.1 143 41.3
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 7.0e-13 78.2 196 35.7
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.2e-12 77.4 137 40.9
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 4.6e-12 75.5 171 35.1
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.8e-12 74.7 115 45.2
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.0e-11 74.3 95 45.3
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 3.9e-11 72.4 189 33.9
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 8.6e-11 71.2 135 35.6
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-09 66.6 118 47.5
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 6.2e-09 65.1 174 39.7
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 1.8e-08 63.5 207 35.7
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 3.1e-08 62.8 108 40.7
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 3.1e-08 62.8 75 49.3
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.8e-08 61.6 109 41.3
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 8.9e-08 61.2 155 32.9
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.4e-07 58.9 104 38.5
Nn2g14986 Nelumbo nucifera HOM05D003790 ORTHO05D004481 4.4e-07 58.9 49 57.1
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.8e-07 58.5 97 38.1
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 7.5e-07 58.2 152 29.6


User provided reference genes

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