Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As2g23268 Beta vulgaris HOM05D001348 ORTHO05D008393 4.4e-45 184.1 84 100.0
EL10Ac4g07758 Beta vulgaris HOM05D001348 ORTHO05D008393 6.8e-14 80.5 37 94.6
Ah.04g166040 Amaranthus hybridus HOM05D001348 ORTHO05D008393 2.0e-13 79.0 37 91.9
ECA240G2960 Erigeron canadensis HOM05D001348 ORTHO05D008393 2.6e-13 78.6 71 56.3
Lsat_1_v5_gn_9_92360 Lactuca sativa HOM05D001348 ORTHO05D008393 2.6e-13 78.6 74 54.1
Hund02021 Selenicereus undatus HOM05D001348 ORTHO05D008393 5.8e-13 77.4 37 89.2
DCAR_016718 Daucus carota HOM05D001348 ORTHO05D008393 9.9e-13 76.6 37 86.5
Dinv40782 Davidia involucrata HOM05D001348 ORTHO05D008393 1.3e-12 76.3 74 54.1
HanXRQChr03g0076721 Helianthus annuus HOM05D001348 ORTHO05D008393 1.7e-12 75.9 74 52.7
Nn1g07231 Nelumbo nucifera HOM05D001348 ORTHO05D008393 1.7e-12 75.9 59 64.4
CANSAT78G2496 Cannabis sativa HOM05D001348 ORTHO05D008393 2.2e-12 75.5 74 51.4
AUR62015829 Chenopodium quinoa HOM05D001348 ORTHO05D008393 2.2e-12 75.5 37 86.5
Ciclev10007401m.g Citrus clementina HOM05D001348 ORTHO05D008393 2.2e-12 75.5 74 52.7
Eucgr.F03487 Eucalyptus grandis HOM05D001348 ORTHO05D008393 2.2e-12 75.5 71 54.9
SGA_v2.0_scaffold363G49944 Striga asiatica HOM05D001348 ORTHO05D008393 2.2e-12 75.5 37 86.5
AUR62020390 Chenopodium quinoa HOM05D001348 ORTHO05D008393 2.9e-12 75.1 37 86.5
Duzib213G0150 Durio zibethinus HOM05D001348 ORTHO05D008393 3.8e-12 74.7 74 51.4
MD11G1212700 Malus domestica HOM05D001348 ORTHO05D008393 3.8e-12 74.7 71 54.9
Potri.001G359200 Populus trichocarpa HOM05D001348 ORTHO05D008393 3.8e-12 74.7 37 83.8
Prupe.4G219000 Prunus persica HOM05D001348 ORTHO05D008393 3.8e-12 74.7 71 54.9
Manes.03G133300 Manihot esculenta HOM05D001348 ORTHO05D008393 4.9e-12 74.3 74 52.7
Actinidia10744 Actinidia chinensis HOM05D001348 ORTHO05D008393 6.4e-12 73.9 37 83.8
FvH4_3g23220 Fragaria vesca HOM05D001348 ORTHO05D008393 6.4e-12 73.9 74 51.4
FAN16G1777 Fragaria x ananassa HOM05D001348 ORTHO05D008393 6.4e-12 73.9 74 51.4
FAN21G3120 Fragaria x ananassa HOM05D001348 ORTHO05D008393 6.4e-12 73.9 74 51.4
FAN25G0105 Fragaria x ananassa HOM05D001348 ORTHO05D008393 6.4e-12 73.9 74 51.4
FAN25G0826 Fragaria x ananassa HOM05D001348 ORTHO05D008393 6.4e-12 73.9 74 51.4
RcHm_v2.0_Chr5g0040901 Rosa chinensis HOM05D001348 ORTHO05D008393 6.4e-12 73.9 74 51.4
TAR624G0107 Trochodendron aralioides HOM05D001348 ORTHO05D008393 6.4e-12 73.9 59 62.7
ClCG09G010970 Citrullus lanatus HOM05D001348 ORTHO05D008393 8.4e-12 73.6 74 50.0
MELO3C013141.2 Cucumis melo HOM05D001348 ORTHO05D008393 8.4e-12 73.6 74 50.0
Migut.H01807 Erythranthe guttata HOM05D001348 ORTHO05D008393 1.1e-11 73.2 74 51.4
PGR031G0282 Punica granatum HOM05D001348 ORTHO05D008393 1.1e-11 73.2 74 50.0
Sed0016477 Sechium edule HOM05D001348 ORTHO05D008393 1.1e-11 73.2 88 45.5
unitig_747.g21692 Utricularia gibba HOM05D001348 ORTHO05D008393 1.1e-11 73.2 37 83.8
Zm00001eb357830 Zea mays HOM05D001348 ORTHO05D008393 1.1e-11 73.2 37 81.1
Aqoxy1G03056 Aquilegia oxysepala HOM05D001348 ORTHO05D008393 1.4e-11 72.8 37 81.1
CSS0015657 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 1.4e-11 72.8 37 81.1
CSS0031743 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 1.4e-11 72.8 37 81.1
ATR0712G161 Amborella trichopoda HOM05D001348 ORTHO05D008393 1.9e-11 72.4 59 61.0
CiPaw.11G192600 Carya illinoinensis HOM05D001348 ORTHO05D008393 1.9e-11 72.4 74 50.0
COL.COLO4_09699 Corchorus olitorius HOM05D001348 ORTHO05D008393 1.9e-11 72.4 74 50.0
TWI38G1719 Tripterygium wilfordii HOM05D001348 ORTHO05D008393 1.9e-11 72.4 37 83.8
Lalb_Chr15g0081511 Lupinus albus HOM05D001348 ORTHO05D008393 2.4e-11 72.0 71 52.1
GSVIVG01037695001 Vitis vinifera HOM05D001348 ORTHO05D008393 2.4e-11 72.0 74 51.4
Thecc.07G031600 Theobroma cacao HOM05D001348 ORTHO05D008393 3.2e-11 71.6 37 81.1
Haze_09716 Corylus avellana HOM05D001348 ORTHO05D008393 4.1e-11 71.2 74 50.0
CsaV3_7G021990 Cucumis sativus L. HOM05D001348 ORTHO05D008393 4.1e-11 71.2 74 48.6
Peaxi162Scf00235g00519 Petunia axillaris HOM05D001348 ORTHO05D008393 4.1e-11 71.2 74 47.3
HPP92_025429 Vanilla planifolia HOM05D001348 ORTHO05D008393 4.1e-11 71.2 37 81.1
MSTRG.14452 Avicennia marina HOM05D001348 ORTHO05D008393 5.4e-11 70.9 37 81.1
Cpa.g.sc12.269 Carica papaya HOM05D001348 ORTHO05D008393 5.4e-11 70.9 74 50.0
Phvul.006G047000 Phaseolus vulgaris HOM05D001348 ORTHO05D008393 5.4e-11 70.9 37 81.1
VMungo0540G0045 Vigna mungo HOM05D001348 ORTHO05D008393 5.4e-11 70.9 37 81.1
CDE04G2814 Ceratophyllum demersum HOM05D001348 ORTHO05D008393 7.1e-11 70.5 37 78.4
MBI10_g29397_MAGBIO Magnolia biondii HOM05D001348 ORTHO05D008393 7.1e-11 70.5 37 81.1
QL08p008747 Quercus lobata HOM05D001348 ORTHO05D008393 7.1e-11 70.5 74 48.6
QL09p024307 Quercus lobata HOM05D001348 ORTHO05D008393 7.1e-11 70.5 74 48.6
arahy.Tifrunner.gnm1.ann1.IC3HGI Arachis hypogaea HOM05D001348 ORTHO05D008393 9.2e-11 70.1 88 44.3
arahy.Tifrunner.gnm1.ann1.QR17ZP Arachis hypogaea HOM05D001348 ORTHO05D008393 9.2e-11 70.1 88 44.3
Cc05_g14070 Coffea canephora HOM05D001348 ORTHO05D008393 9.2e-11 70.1 37 78.4
Gohir.A04G012800 Gossypium hirsutum HOM05D001348 ORTHO05D008393 1.2e-10 69.7 88 44.3
Gohir.D05G373100 Gossypium hirsutum HOM05D001348 ORTHO05D008393 1.2e-10 69.7 88 44.3
Gorai.009G441800 Gossypium raimondii HOM05D001348 ORTHO05D008393 1.2e-10 69.7 88 44.3
vmacro09698 Vaccinium macrocarpon HOM05D001348 ORTHO05D008393 1.2e-10 69.7 37 78.4
Os06g0367100 Oryza sativa ssp. japonica HOM05D001348 ORTHO05D008393 1.6e-10 69.3 37 78.4
Sc16g0005840 Simmondsia chinensis HOM05D001348 ORTHO05D008393 2.1e-10 68.9 31 93.5
Solyc07g064830.3 Solanum lycopersicum HOM05D001348 ORTHO05D008393 4.6e-10 67.8 74 45.9
Sopen07g033020 Solanum pennellii HOM05D001348 ORTHO05D008393 4.6e-10 67.8 74 45.9
RhsimUnG0248600 Rhododendron simsii HOM05D001348 ORTHO05D008393 7.8e-10 67.0 35 80.0
Lj1C878T2 Lonicera japonica HOM05D001348 ORTHO05D008393 1.7e-09 65.9 68 48.5
Nitab4.5_0008150g0010 Nicotiana tabacum HOM05D001348 ORTHO05D008393 2.3e-09 65.5 74 45.9
Ca_26139_v3 Cicer arietinum L. HOM05D001348 ORTHO05D008393 3.0e-09 65.1 74 45.9
TPR.G14440 Trifolium pratense HOM05D001348 ORTHO05D008393 3.9e-09 64.7 74 45.9
Thhalv10020019m.g Eutrema salsugineum HOM05D001348 ORTHO05D008393 5.1e-09 64.3 74 45.9
Glyma.18G092600 Glycine max HOM05D001348 ORTHO05D008393 5.1e-09 64.3 37 70.3
Medtr3g053220 Medicago truncatula HOM05D001348 ORTHO05D008393 5.1e-09 64.3 37 73.0
Lj6g0019683 Lotus japonicus HOM05D001348 ORTHO05D008393 6.6e-09 63.9 74 43.2
PSO478G3826 Papaver somniferum HOM05D001348 ORTHO05D008393 6.6e-09 63.9 37 73.0
CARHR096150 Cardamine hirsuta HOM05D001348 ORTHO05D008393 1.1e-08 63.2 74 44.6
AL3G34160 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 1.5e-08 62.8 74 44.6
BcaB06g26109 Brassica carinata HOM05D001348 ORTHO05D008393 1.5e-08 62.8 74 44.6
BcaC05g28331 Brassica carinata HOM05D001348 ORTHO05D008393 1.5e-08 62.8 74 44.6
C05p43900 Brassica napus HOM05D001348 ORTHO05D008393 1.5e-08 62.8 74 44.6
BolC5t33106H Brassica oleracea HOM05D001348 ORTHO05D008393 1.5e-08 62.8 74 44.6
Sp3g18450 Schrenkiella parvula HOM05D001348 ORTHO05D008393 1.5e-08 62.8 74 44.6
AT3G20440 Arabidopsis thaliana HOM05D001348 ORTHO05D008393 2.5e-08 62.0 74 43.2
THA.LOC104817860 Tarenaya hassleriana HOM05D001348 ORTHO05D008393 2.5e-08 62.0 74 44.6
AL219U10030 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 3.3e-08 61.6 74 43.2
Carub.0003s2038 Capsella rubella HOM05D001348 ORTHO05D008393 3.3e-08 61.6 74 43.2
Psat5g173680 Pisum sativum HOM05D001348 ORTHO05D008393 3.3e-08 61.6 74 44.6
A05p28460 Brassica napus HOM05D001348 ORTHO05D008393 5.6e-08 60.8 70 45.7
BraA05t21725Z Brassica rapa HOM05D001348 ORTHO05D008393 5.6e-08 60.8 70 45.7
Nitab4.5_0000328g0120 Nicotiana tabacum HOM05D001348 ORTHO05D008393 1.2e-07 59.7 68 45.6
Aa31LG8G7250 Aethionema arabicum HOM05D001348 ORTHO05D008393 1.6e-07 59.3 74 43.2
Cc05_g15390 Coffea canephora HOM05D001348 ORTHO05D008393 3.6e-07 58.2 30 80.0
AagrBONN_evm.TU.Sc2ySwM_368.3367 Anthoceros agrestis HOM05D001348 ORTHO05D008393 1.1e-06 56.6 61 45.9


User provided reference genes

Program Settings