Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As1g23088 Beta vulgaris HOM05D021339 ORTHO05D008066 9.2e-130 466.8 229 100.0
AUR62042387 Chenopodium quinoa HOM05D021339 ORTHO05D008066 8.8e-56 221.1 214 55.1
AUR62032040 Chenopodium quinoa HOM05D021339 ORTHO05D008066 1.8e-53 213.4 214 55.1
AUR62032712 Chenopodium quinoa HOM05D021339 ORTHO05D008066 1.8e-53 213.4 214 53.7
Ah.12g059940 Amaranthus hybridus HOM05D021339 ORTHO05D008066 5.6e-42 175.3 198 50.0
Hund10692 Selenicereus undatus HOM05D021339 ORTHO05D008066 4.1e-37 159.1 220 45.5
ClCG10G021240 Citrullus lanatus HOM05D007762 ORTHO05D008066 7.8e-20 101.7 253 32.4
TWI74G1309 Tripterygium wilfordii HOM05D007762 ORTHO05D008066 1.3e-19 100.9 233 37.3
Sc22g0004450 Simmondsia chinensis HOM05D007762 ORTHO05D008066 2.5e-18 96.7 237 36.3
Dinv35582 Davidia involucrata HOM05D007762 ORTHO05D008066 1.6e-17 94.0 240 35.4
CsaV3_3G034800 Cucumis sativus L. HOM05D007762 ORTHO05D008066 6.2e-17 92.0 250 31.6
Peaxi162Scf00330g00715 Petunia axillaris HOM05D007762 ORTHO05D008066 6.8e-16 88.6 253 32.0
Sed0022945 Sechium edule HOM05D007762 ORTHO05D008066 2.6e-15 86.7 247 32.0
Nitab4.5_0000527g0210 Nicotiana tabacum HOM05D007762 ORTHO05D008066 3.4e-15 86.3 239 35.6
GSVIVG01034144001 Vitis vinifera HOM05D007762 ORTHO05D008066 2.9e-14 83.2 241 32.4
CANSAT11G0018 Cannabis sativa HOM05D007762 ORTHO05D008066 4.9e-14 82.4 222 34.2
Manes.09G092000 Manihot esculenta HOM05D007762 ORTHO05D008066 8.4e-14 81.6 238 34.0
CiPaw.09G195100 Carya illinoinensis HOM05D007762 ORTHO05D008066 1.9e-13 80.5 232 33.2
Cfa017354 Carpinus fangiana HOM05D007762 ORTHO05D008066 2.4e-13 80.1 232 33.6
QL07p048844 Quercus lobata HOM05D007762 ORTHO05D008066 4.2e-13 79.3 250 30.0
Gohir.D13G098400 Gossypium hirsutum HOM05D007762 ORTHO05D008066 7.1e-13 78.6 226 33.6
Nitab4.5_0008097g0020 Nicotiana tabacum HOM05D007762 ORTHO05D008066 1.2e-12 77.8 243 32.5
Gorai.001G249600 Gossypium raimondii HOM05D007762 ORTHO05D008066 1.6e-12 77.4 235 31.9
CiPaw.10G146800 Carya illinoinensis HOM05D007762 ORTHO05D008066 2.1e-12 77.0 241 32.4
MSTRG.26781 Avicennia marina HOM05D007762 ORTHO05D008066 2.7e-12 76.6 236 34.7
CAN.G92.14 Capsicum annuum HOM05D007762 ORTHO05D008066 3.5e-12 76.3 243 34.2
Thecc.05G036900 Theobroma cacao HOM05D007762 ORTHO05D008066 6.0e-12 75.5 235 34.0
Lsat_1_v5_gn_9_33361 Lactuca sativa HOM05D007762 ORTHO05D008066 7.8e-12 75.1 218 32.6
TAR633G0209 Trochodendron aralioides HOM05D007762 ORTHO05D008066 7.8e-12 75.1 240 32.9
Hma1.2p1_1889F.1_g306660 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 1.3e-11 74.3 249 30.1
Hma1.2p1_2197F.1_g316916 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 1.3e-11 74.3 249 30.1
COL.COLO4_14776 Corchorus olitorius HOM05D007762 ORTHO05D008066 1.7e-11 73.9 227 33.9
Atru.chr8.1998 Acer truncatum HOM05D007762 ORTHO05D008066 3.0e-11 73.2 237 34.2
Duzib106G0002 Durio zibethinus HOM05D007762 ORTHO05D008066 5.1e-11 72.4 233 33.0
Glyma.07G134000 Glycine max HOM05D007762 ORTHO05D008066 8.7e-11 71.6 214 31.3
PGR031G1528 Punica granatum HOM05D007762 ORTHO05D008066 1.5e-10 70.9 226 30.5
Glyma.18G183600 Glycine max HOM05D007762 ORTHO05D008066 1.9e-10 70.5 215 31.6
Prupe.6G257800 Prunus persica HOM05D007762 ORTHO05D008066 1.9e-10 70.5 229 32.3
MD12G1144400 Malus domestica HOM05D007762 ORTHO05D008066 3.3e-10 69.7 229 32.3
FAN02G3004 Fragaria x ananassa HOM05D007762 ORTHO05D008066 4.3e-10 69.3 236 27.5
Ciclev10013354m.g Citrus clementina HOM05D007762 ORTHO05D008066 5.6e-10 68.9 258 28.7
Sabra06G0066600 Salix brachista HOM05D007762 ORTHO05D003096 5.6e-10 68.9 236 32.2
Actinidia11265 Actinidia chinensis HOM05D007762 ORTHO05D008066 7.3e-10 68.6 257 28.4
Dinv37157 Davidia involucrata HOM05D007762 ORTHO05D008066 9.6e-10 68.2 173 34.7
RcHm_v2.0_Chr3g0466291 Rosa chinensis HOM05D007762 ORTHO05D008066 1.3e-09 67.8 241 32.4
Rhsim05G0194300 Rhododendron simsii HOM05D007762 ORTHO05D008066 2.1e-09 67.0 234 29.5
Cc10_g11770 Coffea canephora HOM05D007762 ORTHO05D008066 3.6e-09 66.2 236 31.8
Gohir.A13G092305 Gossypium hirsutum HOM05D007762 ORTHO05D008066 3.6e-09 66.2 223 30.9
Gohir.A13G092310 Gossypium hirsutum HOM05D007762 ORTHO05D008066 3.6e-09 66.2 223 30.9
FAN05G0447 Fragaria x ananassa HOM05D007762 ORTHO05D008066 4.8e-09 65.9 240 27.9
Oeu001858.1 Olea europaea HOM05D007762 ORTHO05D008066 4.8e-09 65.9 236 30.1
Oeu023077.1 Olea europaea HOM05D007762 ORTHO05D008066 4.8e-09 65.9 255 32.5
MSTRG.5650 Avicennia marina HOM05D007762 ORTHO05D008066 8.1e-09 65.1 146 35.6
Phvul.008G119100 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 8.1e-09 65.1 154 33.8
Solyc10g086560.3 Solanum lycopersicum HOM05D007762 ORTHO05D008066 8.1e-09 65.1 237 30.0
Potri.006G087300 Populus trichocarpa HOM05D007762 ORTHO05D008066 1.1e-08 64.7 238 30.7
Sopen10g035940 Solanum pennellii HOM05D007762 ORTHO05D008066 1.1e-08 64.7 239 31.0
PSO339G2571 Papaver somniferum HOM05D007762 ORTHO05D008066 1.4e-08 64.3 224 28.1
arahy.Tifrunner.gnm1.ann1.LX2K9J Arachis hypogaea HOM05D007762 ORTHO05D008066 3.1e-08 63.2 66 54.5
MELO3C009249.2 Cucumis melo HOM05D007762 ORTHO05D008066 5.3e-08 62.4 225 27.1
MBI05_g29690_MAGBIO Magnolia biondii HOM05D007762 ORTHO05D008066 5.3e-08 62.4 50 60.0
Cc06_g02460 Coffea canephora HOM05D007762 ORTHO05D008066 9.0e-08 61.6 55 56.4
FvH4_6g13420 Fragaria vesca HOM05D007762 ORTHO05D008066 1.2e-07 61.2 127 32.3
FAN09G1623 Fragaria x ananassa HOM05D007762 ORTHO05D008066 1.2e-07 61.2 56 57.1
FAN14G2701 Fragaria x ananassa HOM05D007762 ORTHO05D008066 1.2e-07 61.2 127 32.3
Aqoxy1G00900 Aquilegia oxysepala HOM05D007762 ORTHO05D008066 2.0e-07 60.5 188 31.4
MD04G1131300 Malus domestica HOM05D007762 ORTHO05D008066 2.6e-07 60.1 242 28.5
Lalb_Chr19g0125241 Lupinus albus HOM05D007762 ORTHO05D008066 5.8e-07 58.9 155 32.3
Lj3g0025123 Lotus japonicus HOM05D007762 ORTHO05D008066 2.2e-06 57.0 221 29.4
Phvul.010G014900 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 2.2e-06 57.0 61 50.8
Eucgr.A01283 Eucalyptus grandis HOM05D007762 ORTHO05D008066 6.4e-06 55.5 246 32.1


User provided reference genes

Program Settings