Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 2.0e-78 295.8 164 100.0
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.9e-12 76.6 86 55.8
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.8e-11 72.8 77 55.8
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 2.8e-11 72.8 89 47.2
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 3.6e-11 72.4 82 54.9
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.2e-11 71.6 77 54.5
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 8.1e-11 71.2 77 54.5
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 4.0e-10 68.9 96 46.9
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 4.0e-10 68.9 87 51.7
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 5.2e-10 68.6 87 50.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 1.5e-09 67.0 96 43.8
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.5e-09 67.0 87 51.7
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.5e-09 67.0 84 47.6
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 2.0e-09 66.6 78 52.6
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.0e-09 66.6 78 50.0
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.6e-09 66.2 89 48.3
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 4.4e-09 65.5 88 46.6
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 4.4e-09 65.5 82 53.7
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 5.8e-09 65.1 77 53.2
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 7.6e-09 64.7 78 50.0
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.9e-09 64.3 82 48.8
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-08 63.9 77 48.1
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-08 63.9 81 53.1
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-08 63.9 81 53.1
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 1.3e-08 63.9 77 51.9
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 2.9e-08 62.8 87 50.6
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.9e-08 62.8 90 50.0
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 3.8e-08 62.4 92 43.5
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 3.8e-08 62.4 95 41.1
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.9e-08 62.0 84 47.6
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 6.4e-08 61.6 85 45.9
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 6.4e-08 61.6 77 50.6
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 6.4e-08 61.6 77 54.5
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 8.4e-08 61.2 83 44.6
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 1.1e-07 60.8 80 50.0
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.9e-07 60.1 99 42.4
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.2e-07 58.9 80 52.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 4.2e-07 58.9 77 51.9
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 4.2e-07 58.9 87 46.0
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 9.3e-07 57.8 88 45.5
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.2e-06 57.4 87 47.1
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 1.2e-06 57.4 80 46.2
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 1.6e-06 57.0 90 44.4
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-06 57.0 88 47.7
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 2.1e-06 56.6 77 44.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.1e-06 56.6 90 45.6
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 2.7e-06 56.2 80 50.0
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.7e-06 56.2 88 48.9
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 4.6e-06 55.5 94 43.6
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 7.8e-06 54.7 94 42.6
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 7.8e-06 54.7 95 45.3


User provided reference genes

Program Settings