Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 9.6e-92 340.1 168 100.0
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 5.0e-56 221.5 139 77.7
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 5.0e-56 221.5 140 77.9
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 6.3e-43 177.9 107 78.5
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 1.6e-38 163.3 143 59.4
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 3.7e-35 152.1 142 55.6
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 6.3e-35 151.4 140 57.1
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 1.0e-32 144.1 142 54.2
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.2e-32 142.9 155 52.3
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 2.2e-32 142.9 139 51.1
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 3.8e-32 142.1 136 54.4
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 6.5e-32 141.4 171 48.0
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 8.5e-32 141.0 140 52.1
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 1.5e-31 140.2 148 52.0
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 1.5e-31 140.2 170 46.5
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 3.2e-31 139.0 170 47.1
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 4.2e-31 138.7 139 51.8
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 5.5e-31 138.3 170 45.9
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 5.5e-31 138.3 143 51.7
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 2.1e-30 136.3 147 49.7
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 4.7e-30 135.2 167 50.3
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.8e-29 133.3 142 51.4
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.8e-29 133.3 142 51.4
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 2.3e-29 132.9 142 53.5
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 1.5e-28 130.2 149 49.7
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 2.6e-28 129.4 141 52.5
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 2.6e-28 129.4 138 49.3
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 3.4e-28 129.0 137 53.3
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 3.4e-28 129.0 140 50.7
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 4.4e-28 128.6 138 49.3
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 7.5e-28 127.9 143 47.6
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 2.2e-27 126.3 144 46.5
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 2.8e-27 125.9 143 50.3
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 3.7e-27 125.6 144 45.8
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.1e-26 124.0 140 49.3
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 1.1e-26 124.0 140 50.7
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 1.8e-26 123.2 147 49.0
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 7.0e-26 121.3 138 47.8
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 7.0e-26 121.3 140 48.6
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 7.0e-26 121.3 143 47.6
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 3.5e-25 119.0 142 48.6
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 2.2e-24 116.3 139 49.6
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 2.9e-24 115.9 143 45.5
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 3.8e-24 115.5 151 46.4
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.1e-23 114.0 123 47.2
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 1.6e-22 110.2 133 48.1
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 1.6e-22 110.2 187 35.8
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 3.6e-22 109.0 133 47.4
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 4.7e-22 108.6 135 44.4
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 6.1e-22 108.2 119 47.1
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 2.3e-21 106.3 129 42.6
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 3.0e-21 105.9 142 47.2
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 4.0e-21 105.5 133 41.4
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 4.0e-21 105.5 123 43.9
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 5.2e-21 105.1 138 45.7
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 5.2e-21 105.1 141 44.0
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 1.2e-20 104.0 141 46.1
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 1.2e-20 104.0 145 41.4
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 1.2e-20 104.0 140 42.1
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 1.5e-20 103.6 141 46.1
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 2.0e-20 103.2 141 45.4
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 2.0e-20 103.2 141 46.8
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 2.6e-20 102.8 141 46.8
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 2.6e-20 102.8 137 46.0
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 2.6e-20 102.8 141 46.8
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 4.4e-20 102.1 141 45.4
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 5.7e-20 101.7 138 47.8
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 7.5e-20 101.3 86 51.2
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 9.8e-20 100.9 138 44.9
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 9.8e-20 100.9 131 48.1
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 9.8e-20 100.9 131 42.7
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.3e-19 100.5 126 45.2
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 1.3e-19 100.5 176 37.5
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 1.3e-19 100.5 132 42.4
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.8e-19 99.4 141 46.1
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 3.7e-19 99.0 163 41.1
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 3.7e-19 99.0 138 46.4
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 4.9e-19 98.6 153 43.1
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 8.3e-19 97.8 130 46.2
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 8.3e-19 97.8 191 34.0
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 1.1e-18 97.4 123 48.0
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.1e-18 95.9 141 43.3
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 7.0e-18 94.7 116 38.8
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.2e-17 94.0 140 45.7
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 2.7e-17 92.8 189 33.9
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 4.5e-17 92.0 131 44.3
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 4.5e-17 92.0 127 44.9
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 5.9e-17 91.7 140 45.0
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 5.9e-17 91.7 131 45.8
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 2.3e-16 89.7 105 49.5
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 2.9e-16 89.4 133 44.4
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 5.0e-16 88.6 140 43.6
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 5.0e-16 88.6 183 36.1
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.1e-15 87.4 134 39.6
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.5e-15 87.0 134 39.6
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 1.2e-14 84.0 125 44.0
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.2e-14 84.0 135 38.5
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 4.0e-13 79.0 139 41.0
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 8.9e-13 77.8 103 45.6
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 1.5e-12 77.0 131 37.4
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 1.5e-12 77.0 125 42.4
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 4.4e-12 75.5 105 35.2
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 5.7e-12 75.1 131 39.7
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 5.7e-12 75.1 131 39.7
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.3e-11 73.9 104 45.2
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 1.6e-09 67.0 59 55.9
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 4.6e-09 65.5 118 38.1
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 2.3e-08 63.2 122 37.7
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 2.3e-08 63.2 74 39.2
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 2.3e-08 63.2 70 47.1
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 5.0e-08 62.0 124 35.5
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 6.6e-08 61.6 50 54.0
Aqoxy4G02934 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 1.1e-07 60.8 101 34.7
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.9e-07 60.1 97 42.3
AT3G07580 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 2.5e-07 59.7 134 35.8
Aa31LG5G18140 Aethionema arabicum HOM05D005992 ORTHO05D007476 5.6e-07 58.5 57 50.9


User provided reference genes

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