Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g23017 Beta vulgaris HOM05D006753 ORTHO05D008521 6.9e-63 243.8 124 100.0
AUR62032899 Chenopodium quinoa HOM05D006753 ORTHO05D008521 5.3e-39 164.5 118 73.7
AUR62017753 Chenopodium quinoa HOM05D006753 ORTHO05D008521 1.2e-38 163.3 117 76.1
Sc21g0003760 Simmondsia chinensis HOM05D006753 ORTHO05D008521 1.0e-34 150.2 115 69.6
TWI53G0448 Tripterygium wilfordii HOM05D006753 ORTHO05D008521 1.1e-33 146.7 125 62.4
Nn3g18540 Nelumbo nucifera HOM05D006753 ORTHO05D008521 1.3e-32 143.3 121 63.6
TAR629G2108 Trochodendron aralioides HOM05D006753 ORTHO05D008521 3.7e-32 141.7 114 64.9
AUR62020818 Chenopodium quinoa HOM05D006753 ORTHO05D008521 6.3e-32 141.0 113 69.0
Duzib052G0750 Durio zibethinus HOM05D006753 ORTHO05D008521 6.3e-32 141.0 113 66.4
GSVIVG01034354001 Vitis vinifera HOM05D006753 ORTHO05D008521 6.3e-32 141.0 121 61.2
Cfa018673 Carpinus fangiana HOM05D006753 ORTHO05D008521 1.4e-31 139.8 114 64.0
MD13G1001300 Malus domestica HOM05D006753 ORTHO05D008521 1.8e-31 139.4 111 64.0
Phvul.007G012200 Phaseolus vulgaris HOM05D006753 ORTHO05D008521 2.4e-31 139.0 124 58.9
CsaV3_5G029140 Cucumis sativus L. HOM05D006753 ORTHO05D008521 3.1e-31 138.7 121 60.3
MELO3C011766.2 Cucumis melo HOM05D006753 ORTHO05D008521 5.3e-31 137.9 121 60.3
PGR044G1510 Punica granatum HOM05D006753 ORTHO05D008521 5.3e-31 137.9 123 62.6
QL01p000327 Quercus lobata HOM05D006753 ORTHO05D008521 5.3e-31 137.9 112 63.4
Lalb_Chr02g0144111 Lupinus albus HOM05D006753 ORTHO05D008521 1.2e-30 136.7 115 62.6
MSTRG.13663 Avicennia marina HOM05D006753 ORTHO05D008521 2.0e-30 136.0 114 62.3
Medtr1g115255 Medicago truncatula HOM05D006753 ORTHO05D008521 4.5e-30 134.8 116 61.2
Ciclev10017207m.g Citrus clementina HOM05D006753 ORTHO05D008521 5.9e-30 134.4 114 64.0
Glyma.10G288900 Glycine max HOM05D006753 ORTHO05D008521 5.9e-30 134.4 115 60.0
MBI03_g11899_MAGBIO Magnolia biondii HOM05D006753 ORTHO05D008521 7.7e-30 134.0 110 61.8
FAN17G2405 Fragaria x ananassa HOM05D006753 ORTHO05D008521 1.0e-29 133.7 122 56.6
Manes.04G161100 Manihot esculenta HOM05D006753 ORTHO05D008521 1.0e-29 133.7 113 62.8
RcHm_v2.0_Chr4g0447151 Rosa chinensis HOM05D006753 ORTHO05D008521 1.0e-29 133.7 111 61.3
Duzib132G0454 Durio zibethinus HOM05D006753 ORTHO05D008521 1.3e-29 133.3 113 64.6
FvH4_4g37311 Fragaria vesca HOM05D006753 ORTHO05D008521 1.7e-29 132.9 122 55.7
COL.COLO4_33141 Corchorus olitorius HOM05D006753 ORTHO05D008521 2.2e-29 132.5 123 60.2
Thecc.02G152400 Theobroma cacao HOM05D006753 ORTHO05D008521 5.0e-29 131.3 126 59.5
FAN07G1749 Fragaria x ananassa HOM05D006753 ORTHO05D008521 8.5e-29 130.6 122 55.7
Lj5g0026283 Lotus japonicus HOM05D006753 ORTHO05D008521 8.5e-29 130.6 114 62.3
Sed0019092 Sechium edule HOM05D006753 ORTHO05D008521 8.5e-29 130.6 114 61.4
CANSAT78G0938 Cannabis sativa HOM05D006753 ORTHO05D008521 1.1e-28 130.2 115 60.0
ClCG11G012760 Citrullus lanatus HOM05D006753 ORTHO05D008521 2.5e-28 129.0 114 60.5
SEGI_09956 Sequoiadendron giganteum HOM05D006753 ORTHO05D008521 2.5e-28 129.0 112 59.8
Sopen03g009600 Solanum pennellii HOM05D006753 ORTHO05D008521 2.5e-28 129.0 113 61.1
ATR0124G001 Amborella trichopoda HOM05D006753 ORTHO05D008521 1.2e-27 126.7 111 64.9
CiPaw.16G000900 Carya illinoinensis HOM05D006753 ORTHO05D008521 1.6e-27 126.3 111 60.4
Os10g0491900 Oryza sativa ssp. japonica HOM05D006753 ORTHO05D008521 2.7e-27 125.6 115 60.9
Nitab4.5_0000075g0200 Nicotiana tabacum HOM05D006753 ORTHO05D008521 3.6e-27 125.2 119 57.1
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 3.6e-27 125.2 112 58.0
VMungo0720G0065 Vigna mungo HOM05D006753 ORTHO05D008521 3.6e-27 125.2 115 58.3
CAN.G815.2 Capsicum annuum HOM05D006753 ORTHO05D008521 4.7e-27 124.8 112 58.0
SGA_v2.0_scaffold119G32769 Striga asiatica HOM05D006753 ORTHO05D008521 6.1e-27 124.4 114 58.8
Atru.chr11.42 Acer truncatum HOM05D006753 ORTHO05D008521 1.0e-26 123.6 114 60.5
PGSC0003DMG400018762 Solanum tuberosum HOM05D006753 ORTHO05D008521 1.0e-26 123.6 113 58.4
Potri.008G003100 Populus trichocarpa HOM05D006753 ORTHO05D008521 1.8e-26 122.9 124 55.6
DCAR_023493 Daucus carota HOM05D006753 ORTHO05D008521 3.0e-26 122.1 123 56.1
Migut.E00593 Erythranthe guttata HOM05D006753 ORTHO05D008521 3.0e-26 122.1 110 60.0
Sabra08G0001000 Salix brachista HOM05D006753 ORTHO05D008521 3.0e-26 122.1 122 55.7
Zm00001eb044950 Zea mays HOM05D006753 ORTHO05D008521 3.0e-26 122.1 115 56.5
Rhsim05G0152000 Rhododendron simsii HOM05D006753 ORTHO05D008521 4.0e-26 121.7 105 62.9
Thhalv10002245m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 6.7e-26 120.9 115 55.7
Migut.E00658 Erythranthe guttata HOM05D006753 ORTHO05D008521 1.1e-25 120.2 110 59.1
Psat6g234480 Pisum sativum HOM05D006753 ORTHO05D008521 1.1e-25 120.2 113 57.5
Ca_11278_v3 Cicer arietinum L. HOM05D006753 ORTHO05D008521 2.6e-25 119.0 112 57.1
Nitab4.5_0008337g0010 Nicotiana tabacum HOM05D006753 ORTHO05D008521 5.7e-25 117.9 119 52.9
Aqoxy3G04333 Aquilegia oxysepala HOM05D006753 ORTHO05D008521 1.3e-24 116.7 105 61.0
Nitab4.5_0001307g0130 Nicotiana tabacum HOM05D006753 ORTHO05D008521 2.8e-24 115.5 119 52.1
CDE05G0871 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 8.2e-24 114.0 114 55.3
ECA238G1815 Erigeron canadensis HOM05D006753 ORTHO05D008521 8.2e-24 114.0 113 57.5
CDE05G2438 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 1.1e-23 113.6 115 54.8
RcHm_v2.0_Chr5g0030611 Rosa chinensis HOM05D006753 ORTHO05D008521 2.4e-23 112.5 114 53.5
Dinv25482 Davidia involucrata HOM05D006753 ORTHO05D008521 4.1e-23 111.7 127 51.2
Gohir.D12G135600 Gossypium hirsutum HOM05D006753 ORTHO05D008521 5.3e-23 111.3 118 53.4
Gorai.008G146800 Gossypium raimondii HOM05D006753 ORTHO05D008521 1.2e-22 110.2 118 53.4
Sp6g34360 Schrenkiella parvula HOM05D006753 ORTHO05D008521 1.6e-22 109.8 124 50.8
Gohir.A12G132000 Gossypium hirsutum HOM05D006753 ORTHO05D008521 2.0e-22 109.4 114 53.5
CARHR204450 Cardamine hirsuta HOM05D006753 ORTHO05D008521 2.7e-22 109.0 115 53.0
PSO782G2482 Papaver somniferum HOM05D006753 ORTHO05D008521 2.7e-22 109.0 111 52.3
AT3G52350 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 3.5e-22 108.6 111 55.9
Carub.0005s1869 Capsella rubella HOM05D006753 ORTHO05D008521 4.5e-22 108.2 112 53.6
Lsat_1_v5_gn_2_64221 Lactuca sativa HOM05D006753 ORTHO05D008521 4.5e-22 108.2 111 54.1
FAN11G3971 Fragaria x ananassa HOM05D006753 ORTHO05D008521 5.9e-22 107.8 108 52.8
PSO063G2822 Papaver somniferum HOM05D006753 ORTHO05D008521 1.7e-21 106.3 111 51.4
Peaxi162Scf00003g02334 Petunia axillaris HOM05D006753 ORTHO05D008521 2.2e-21 105.9 105 56.2
Prupe.1G351400 Prunus persica HOM05D006753 ORTHO05D008521 2.2e-21 105.9 111 51.4
FvH4_3g18161 Fragaria vesca HOM05D006753 ORTHO05D008521 2.9e-21 105.5 108 51.9
TPR.G4104 Trifolium pratense HOM05D006753 ORTHO05D008521 3.8e-21 105.1 110 54.5
AL5G33000 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 1.1e-20 103.6 118 49.2
Pp3c15_7650 Physcomitrium patens HOM05D006753 ORTHO05D008521 1.1e-20 103.6 112 52.7
Lj6g0020021 Lotus japonicus HOM05D006753 ORTHO05D008521 4.7e-19 98.2 110 50.0
BraA09t41301Z Brassica rapa HOM05D006753 ORTHO05D008521 8.0e-19 97.4 113 48.7
arahy.Tifrunner.gnm1.ann1.IW7U68 Arachis hypogaea HOM05D006753 ORTHO05D008521 1.4e-18 96.7 66 69.7
arahy.Tifrunner.gnm1.ann1.RGG8YR Arachis hypogaea HOM05D006753 ORTHO05D008521 1.4e-18 96.7 66 69.7
A09p59170 Brassica napus HOM05D006753 ORTHO05D008521 4.0e-18 95.1 114 50.0
A10p28190 Brassica napus HOM05D006753 ORTHO05D008521 5.2e-18 94.7 115 48.7
BraA10t44868Z Brassica rapa HOM05D006753 ORTHO05D008521 5.2e-18 94.7 115 48.7
Eucgr.J00331 Eucalyptus grandis HOM05D006753 ORTHO05D008521 5.2e-18 94.7 162 37.7
AT5G08535 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 2.0e-17 92.8 109 49.5
BcaC07g41240 Brassica carinata HOM05D006753 ORTHO05D008521 2.0e-17 92.8 111 48.6
C08p42460 Brassica napus HOM05D006753 ORTHO05D008521 2.0e-17 92.8 111 48.6
BolC8t51807H Brassica oleracea HOM05D006753 ORTHO05D008521 2.0e-17 92.8 111 48.6
Cc11_g04160 Coffea canephora HOM05D006753 ORTHO05D008521 3.4e-17 92.0 51 82.4
HPP92_003487 Vanilla planifolia HOM05D006753 ORTHO05D008521 5.7e-17 91.3 76 63.2
HPP92_026885 Vanilla planifolia HOM05D006753 ORTHO05D008521 5.7e-17 91.3 76 63.2
BolC9t59587H Brassica oleracea HOM05D006753 ORTHO05D008521 9.8e-17 90.5 114 48.2
AL6G19240 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 1.7e-16 89.7 107 48.6
C09p68400 Brassica napus HOM05D006753 ORTHO05D008521 3.7e-16 88.6 124 44.4
Mapoly0001s0293 Marchantia polymorpha HOM05D006753 ORTHO05D008521 3.7e-16 88.6 121 45.5
BcaB08g34880 Brassica carinata HOM05D006753 ORTHO05D008521 6.3e-16 87.8 111 45.9
Carub.0006s0749 Capsella rubella HOM05D006753 ORTHO05D008521 1.1e-15 87.0 124 44.4
HanXRQChr14g0446421 Helianthus annuus HOM05D006753 ORTHO05D008521 2.4e-15 85.9 108 49.1
SMO166G0033 Selaginella moellendorffii HOM05D006753 ORTHO05D008521 1.2e-14 83.6 106 46.2
BcaB08g37248 Brassica carinata HOM05D006753 ORTHO05D008521 2.0e-14 82.8 110 48.2
Nitab4.5_0002355g0040 Nicotiana tabacum HOM05D006753 ORTHO05D008521 4.5e-14 81.6 93 55.9
Aa31LG3G18000 Aethionema arabicum HOM05D006753 ORTHO05D008521 1.3e-13 80.1 107 45.8
SMO115G0110 Selaginella moellendorffii HOM05D000422 ORTHO05D002369 1.7e-13 79.7 104 45.2
SHI21226 Sapria himalayana HOM05D000843 ORTHO05D000698 1.1e-12 77.0 52 71.2
Thhalv10015604m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 3.2e-12 75.5 84 52.4
AagrBONN_evm.TU.Sc2ySwM_228.1188 Anthoceros agrestis HOM05D006753 ORTHO05D008521 3.0e-10 68.9 125 37.6
Haze_17401 Corylus avellana HOM05D006753 ORTHO05D008521 4.9e-08 61.6 35 80.0
COL.COLO4_21663 Corchorus olitorius HOM05D006753 ORTHO05D008521 1.8e-07 59.7 86 48.8
MCO15G305 Micromonas commoda HOM05D006753 ORTHO05D008521 9.2e-07 57.4 52 44.2
Cre02.g085200 Chlamydomonas reinhardtii HOM05D006753 ORTHO05D008521 1.2e-06 57.0 45 51.1
vmacro19681 Vaccinium macrocarpon HOM05D006753 ORTHO05D008521 1.6e-06 56.6 159 28.9
CSS0023466 Camellia sinensis var. sinensis HOM05D006753 ORTHO05D008521 2.0e-06 56.2 27 88.9
CDE04G1996 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 2.7e-06 55.8 55 50.9
CBR_g19876 Chara braunii HOM05D004785 ORTHO05D005704 2.7e-06 55.8 76 46.1
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 4.5e-06 55.1 111 34.2
CSS0010672 Camellia sinensis var. sinensis HOM05D006753 ORTHO05D008521 7.7e-06 54.3 44 63.6
Lj4g0003244 Lotus japonicus HOM05D005384 ORTHO05D006477 7.7e-06 54.3 67 37.3


User provided reference genes

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