Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 1.2e-152 543.1 281 100.0
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 1.9e-148 529.3 273 100.0
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.2e-70 270.8 278 54.7
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.0e-53 214.5 215 51.2
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 1.8e-50 203.8 277 43.0
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 7.5e-49 198.4 275 42.2
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 1.7e-48 197.2 276 43.1
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 3.5e-46 189.5 276 43.1
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 1.0e-45 188.0 280 38.9
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 1.5e-44 184.1 277 41.9
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.1e-42 176.4 280 40.7
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 7.1e-39 165.2 293 36.5
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 2.1e-38 163.7 244 35.7
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.5e-36 156.8 282 36.5
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.5e-36 156.8 282 36.5
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 5.2e-34 149.1 280 35.4
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.2e-27 127.9 254 36.2
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 9.0e-26 121.7 288 34.4
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 2.2e-24 117.1 288 31.6
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 4.9e-24 115.9 256 34.4
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 2.4e-23 113.6 256 33.6
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 1.6e-22 110.9 260 34.6
DCAR_028983 Daucus carota HOM05D008909 ORTHO05D008474 2.1e-22 110.5 254 33.5
Ah.13g070220 Amaranthus hybridus HOM05D008909 ORTHO05D008474 3.5e-22 109.8 298 32.6
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-21 107.8 253 34.8
Ah.13g070230 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.3e-21 107.1 298 32.2
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 3.3e-20 103.2 242 33.9
Ah.13g070240 Amaranthus hybridus HOM05D008909 ORTHO05D008474 3.3e-20 103.2 284 32.4
Ah.13g070250 Amaranthus hybridus HOM05D008909 ORTHO05D008474 3.3e-20 103.2 298 32.2
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 4.3e-20 102.8 212 34.0
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 3.6e-19 99.8 252 34.5
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.1e-18 96.7 262 31.3
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 7.6e-17 92.0 253 29.6
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 7.6e-17 92.0 247 32.0
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 1.1e-15 88.2 264 29.2
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 3.2e-15 86.7 244 31.6
Ah.10g031100 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.2e-15 86.3 239 31.8
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 1.2e-14 84.7 242 29.3
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 2.1e-14 84.0 244 29.9
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.7e-14 83.6 267 27.3
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 6.0e-14 82.4 239 28.9
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 7.9e-14 82.0 289 27.3
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 1.3e-13 81.3 291 27.1
AUR62040175 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.8e-13 80.9 117 41.9
AUR62040180 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.8e-13 80.9 117 41.9
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 1.8e-13 80.9 248 25.8
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.8e-13 80.9 264 28.0
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 2.3e-13 80.5 253 28.1
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 2.3e-13 80.5 228 29.4
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 5.1e-13 79.3 240 27.9
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.7e-13 79.0 242 27.7
Ah.01g011860 Amaranthus hybridus HOM05D008909 ORTHO05D008474 1.1e-12 78.2 277 26.0
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 1.9e-12 77.4 240 27.9
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 4.3e-12 76.3 237 27.4
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 1.3e-11 74.7 239 27.6
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 1.6e-11 74.3 240 28.8
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 2.8e-11 73.6 233 25.3
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 4.8e-11 72.8 254 28.3
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 4.8e-11 72.8 202 27.7
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 6.2e-11 72.4 221 26.2
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 8.1e-11 72.0 231 27.3
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.1e-10 71.6 256 26.6
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 2.4e-10 70.5 178 32.0
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 2.4e-10 70.5 178 32.0
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.0e-10 69.7 238 27.3
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 5.3e-10 69.3 221 24.9
Ah.10g036060 Amaranthus hybridus HOM05D008909 ORTHO05D008474 9.0e-10 68.6 128 35.9
Ah.15g098420 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.9e-08 62.8 160 27.5
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.9e-08 62.8 256 26.2
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 7.1e-07 58.9 255 28.2
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 9.3e-07 58.5 227 28.2
Ah.15g097580 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.1e-06 57.4 154 27.9
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 3.5e-06 56.6 264 25.0


User provided reference genes

Program Settings