Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 9.2e-170 600.1 301 100.0
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 4.2e-146 521.5 302 87.7
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 3.0e-144 515.4 285 90.9
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-139 500.0 303 84.8
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 2.3e-80 303.1 294 56.5
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.4e-71 272.7 302 54.0
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 4.1e-69 265.8 277 50.9
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.3e-59 233.4 311 45.3
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 3.9e-59 232.6 276 47.5
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.5e-58 230.7 320 44.4
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.5e-58 230.7 320 44.4
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 2.1e-49 200.3 276 43.1
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 2.1e-49 200.3 276 43.1
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.1e-48 196.4 281 42.0
Ah.13g070230 Amaranthus hybridus HOM05D008909 ORTHO05D008474 1.3e-35 154.5 281 39.1
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.9e-35 152.9 222 40.1
Ah.13g070220 Amaranthus hybridus HOM05D008909 ORTHO05D008474 5.1e-35 152.5 283 39.2
Ah.13g070250 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.8e-33 146.7 280 39.3
Ah.13g070240 Amaranthus hybridus HOM05D008909 ORTHO05D008474 5.3e-32 142.5 278 38.5
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 2.1e-28 130.6 256 34.4
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 8.1e-25 118.6 292 31.8
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.8e-24 117.5 270 31.9
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.0e-23 114.0 271 31.7
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 2.6e-23 113.6 245 33.1
DCAR_028983 Daucus carota HOM05D008909 ORTHO05D008474 1.3e-22 111.3 261 32.6
AUR62040175 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.1e-21 108.2 127 49.6
AUR62040180 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.1e-21 108.2 127 49.6
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 1.9e-21 107.5 299 32.4
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 2.4e-21 107.1 303 33.7
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 4.6e-20 102.8 263 31.6
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 6.0e-20 102.4 247 30.4
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 1.8e-19 100.9 273 33.7
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 3.9e-19 99.8 295 31.5
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 2.1e-17 94.0 242 28.9
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 4.8e-17 92.8 273 27.5
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 1.8e-16 90.9 252 29.0
Ah.01g011860 Amaranthus hybridus HOM05D008909 ORTHO05D008474 9.0e-16 88.6 224 30.4
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 9.0e-16 88.6 226 27.4
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 2.6e-15 87.0 243 28.0
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 2.6e-15 87.0 192 31.8
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 3.4e-15 86.7 224 29.0
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 4.5e-15 86.3 248 27.8
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 9.9e-15 85.1 192 31.8
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 9.9e-15 85.1 284 25.0
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 9.9e-15 85.1 253 27.3
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.7e-14 84.3 274 26.6
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-14 84.0 181 28.2
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 4.9e-14 82.8 224 29.0
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 1.4e-13 81.3 239 28.5
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 1.4e-13 81.3 260 27.7
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 1.9e-13 80.9 266 25.6
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.5e-13 80.5 258 24.8
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 2.5e-13 80.5 261 25.7
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 2.5e-13 80.5 269 26.0
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 3.2e-13 80.1 192 31.8
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 2.1e-12 77.4 239 25.5
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 2.1e-12 77.4 260 26.5
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.7e-12 77.0 270 26.3
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 3.5e-12 76.6 242 26.4
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.3e-11 74.7 262 26.0
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.8e-11 74.3 180 27.8
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.8e-11 74.3 180 27.8
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 2.3e-11 73.9 195 29.7
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.9e-10 70.9 274 25.5
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 3.3e-10 70.1 220 26.8
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 5.6e-10 69.3 258 23.6
Ah.10g031100 Amaranthus hybridus HOM05D008909 ORTHO05D008474 7.4e-10 68.9 201 31.8
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 2.1e-09 67.4 234 25.6
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.1e-09 67.4 271 24.0
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.1e-08 65.1 222 24.3
Ah.15g098420 Amaranthus hybridus HOM05D008909 ORTHO05D008474 6.9e-08 62.4 217 27.2
AUR62015055 Chenopodium quinoa HOM05D008909 ORTHO05D008474 6.9e-08 62.4 62 45.2
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.2e-07 61.6 234 23.1
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 2.6e-07 60.5 235 28.5
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.0e-06 58.5 245 21.6
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.0e-06 58.5 245 22.4
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 1.7e-06 57.8 237 24.9
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.2e-06 57.4 267 25.1
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 2.9e-06 57.0 132 28.0
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.9e-06 57.0 245 22.4
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 3.8e-06 56.6 234 22.2
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 6.5e-06 55.8 184 25.5


User provided reference genes

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