Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 2.6e-66 255.4 141 100.0
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 3.1e-51 205.3 141 73.0
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.3e-49 199.9 145 73.1
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.3e-49 199.9 145 73.1
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 2.2e-49 199.1 142 72.5
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 3.5e-47 191.8 141 68.8
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 7.9e-47 190.7 141 68.8
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 1.3e-46 189.9 141 68.8
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 1.3e-46 189.9 141 68.8
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 1.1e-45 186.8 145 74.5
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 3.3e-45 185.3 143 66.4
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 4.3e-45 184.9 143 73.4
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 2.1e-44 182.6 142 68.3
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 4.8e-44 181.4 143 67.1
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 1.1e-43 180.3 143 66.4
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.1e-43 180.3 143 66.4
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.1e-43 180.3 143 66.4
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 1.4e-43 179.9 141 68.8
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 2.4e-43 179.1 137 74.5
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 2.4e-43 179.1 142 65.5
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 5.3e-43 177.9 142 64.8
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.2e-42 176.8 143 65.7
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 1.2e-42 176.8 140 64.3
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 3.4e-42 175.3 142 67.6
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 7.6e-42 174.1 141 69.5
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 3.8e-41 171.8 141 64.5
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 1.1e-40 170.2 139 64.7
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 1.4e-40 169.9 141 63.8
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 2.5e-40 169.1 139 62.6
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 4.2e-40 168.3 137 68.6
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 4.2e-40 168.3 141 63.1
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 7.1e-40 167.5 142 63.4
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 7.1e-40 167.5 141 61.7
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 9.3e-40 167.2 141 64.5
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 9.3e-40 167.2 141 64.5
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 1.2e-39 166.8 142 64.1
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 1.2e-39 166.8 141 64.5
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 1.2e-39 166.8 141 63.1
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 2.7e-39 165.6 137 63.5
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 3.5e-39 165.2 141 61.7
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 3.5e-39 165.2 141 61.0
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 4.6e-39 164.9 142 61.3
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 1.3e-38 163.3 141 60.3
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 2.3e-38 162.5 141 58.9
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 2.3e-38 162.5 141 64.5
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 2.3e-38 162.5 141 59.6
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 3.0e-38 162.2 142 61.3
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 1.1e-37 160.2 141 58.9
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 1.5e-37 159.8 142 59.9
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 2.5e-37 159.1 138 63.0
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 4.3e-37 158.3 142 59.9
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 7.4e-37 157.5 142 58.5
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 9.6e-37 157.1 142 59.2
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 9.6e-37 157.1 142 59.9
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.3e-36 156.8 141 56.7
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 1.3e-36 156.8 143 58.0
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 1.3e-36 156.8 143 60.1
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 1.6e-36 156.4 140 60.0
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 2.1e-36 156.0 115 68.7
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 2.1e-36 156.0 142 60.6
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 2.8e-36 155.6 138 58.7
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 2.8e-36 155.6 142 60.6
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 2.8e-36 155.6 141 59.6
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 3.7e-36 155.2 137 60.6
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 6.3e-36 154.5 141 56.7
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 8.2e-36 154.1 142 57.7
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 1.1e-35 153.7 143 58.7
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 1.4e-35 153.3 144 54.9
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 4.1e-35 151.8 144 56.9
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 6.9e-35 151.0 141 61.0
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 6.9e-35 151.0 142 57.0
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 6.9e-35 151.0 143 58.0
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 2.0e-34 149.4 141 57.4
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 2.6e-34 149.1 141 56.7
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 1.3e-33 146.7 138 58.0
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 2.9e-33 145.6 139 57.6
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 1.1e-32 143.7 134 58.2
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 1.1e-32 143.7 141 56.7
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 1.4e-32 143.3 137 58.4
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 1.4e-32 143.3 141 54.6
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 1.4e-32 143.3 139 57.6
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 2.5e-32 142.5 139 56.1
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 2.5e-32 142.5 156 51.3
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 4.6e-31 138.3 139 54.7
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 6.1e-31 137.9 119 63.0
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 3.9e-30 135.2 141 55.3
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 6.7e-30 134.4 137 52.6
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 2.5e-29 132.5 137 53.3
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 4.3e-29 131.7 143 52.4
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 5.7e-29 131.3 145 53.8
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.3e-28 130.2 142 54.2
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 2.2e-28 129.4 141 50.4
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 1.4e-27 126.7 142 51.4
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 2.0e-26 122.9 112 60.7
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 2.6e-26 122.5 128 45.3
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 7.2e-24 114.4 130 43.8
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 2.1e-23 112.8 117 53.0
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 6.1e-23 111.3 124 40.3
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 1.0e-22 110.5 136 49.3
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 1.8e-22 109.8 114 52.6
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 6.7e-22 107.8 77 66.2
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 1.1e-21 107.1 70 74.3
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 4.4e-21 105.1 101 57.4
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 1.3e-20 103.6 113 48.7
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 2.8e-20 102.4 99 58.6
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 4.8e-20 101.7 120 45.8
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 1.0e-17 94.0 121 43.8
CiPaw.16G110800 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.4e-16 90.1 74 64.9
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 4.7e-15 85.1 118 41.5
Hma1.2p1_0935F.1_g238700 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 3.9e-14 82.0 42 88.1
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 6.7e-14 81.3 141 39.7
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 4.4e-13 78.6 90 50.0
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 8.2e-12 74.3 79 50.6
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 3.5e-10 68.9 45 75.6
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 2.2e-09 66.2 79 46.8
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 3.2e-08 62.4 76 55.3
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 3.6e-07 58.9 70 45.7
PRCOL_00001928 Prasinoderma coloniale HOM05D006738 ORTHO05D008191 6.1e-07 58.2 58 41.4


User provided reference genes

Program Settings