Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22925 Beta vulgaris HOM05D005588 ORTHO05D006615 4.1e-204 714.5 369 100.0
AUR62017670 Chenopodium quinoa HOM05D005588 ORTHO05D006615 6.9e-151 537.7 364 78.3
AUR62015207 Chenopodium quinoa HOM05D005588 ORTHO05D006615 1.4e-124 450.3 364 69.8
Hund00348 Selenicereus undatus HOM05D005588 ORTHO05D006615 3.8e-109 399.1 354 62.4
TAR629G1265 Trochodendron aralioides HOM05D005588 ORTHO05D006615 1.0e-106 391.0 349 59.6
Thecc.02G311800 Theobroma cacao HOM05D005588 ORTHO05D006615 5.3e-103 378.6 338 60.1
Sc10g0006750 Simmondsia chinensis HOM05D005588 ORTHO05D006615 1.7e-101 373.6 355 58.3
Duzib248G1275 Durio zibethinus HOM05D005588 ORTHO05D006615 2.9e-101 372.9 338 57.4
Duzib251G0713 Durio zibethinus HOM05D005588 ORTHO05D006615 5.0e-101 372.1 338 58.6
PSO063G5510 Papaver somniferum HOM05D005588 ORTHO05D006615 1.9e-100 370.2 338 57.1
PSO782G2071 Papaver somniferum HOM05D005588 ORTHO05D006615 5.5e-100 368.6 338 57.7
MSTRG.11941 Avicennia marina HOM05D005588 ORTHO05D006615 1.6e-99 367.1 365 55.3
Manes.11G109700 Manihot esculenta HOM05D005588 ORTHO05D006615 2.7e-99 366.3 324 58.6
Dinv17600 Davidia involucrata HOM05D005588 ORTHO05D006615 3.6e-99 365.9 319 61.1
CANSAT64G0248 Cannabis sativa HOM05D005588 ORTHO05D006615 8.0e-99 364.8 319 59.9
Gorai.013G027800 Gossypium raimondii HOM05D005588 ORTHO05D006615 3.0e-98 362.8 346 57.8
VMungo0251G1670 Vigna mungo HOM05D005588 ORTHO05D006615 4.0e-98 362.5 345 55.4
Potri.007G070600 Populus trichocarpa HOM05D005588 ORTHO05D006615 8.8e-98 361.3 343 56.6
Gohir.A13G026000 Gossypium hirsutum HOM05D005588 ORTHO05D006615 1.5e-97 360.5 346 57.5
GSVIVG01010179001 Vitis vinifera HOM05D005588 ORTHO05D006615 1.5e-97 360.5 338 57.4
TWI53G2090 Tripterygium wilfordii HOM05D005588 ORTHO05D006615 2.0e-97 360.1 338 57.4
Psat6g098600 Pisum sativum HOM05D005588 ORTHO05D006615 2.6e-97 359.8 331 58.6
Aqoxy3G04274 Aquilegia oxysepala HOM05D005588 ORTHO05D006615 3.4e-97 359.4 319 59.6
Prupe.1G345600 Prunus persica HOM05D005588 ORTHO05D006615 4.4e-97 359.0 337 56.1
MELO3C024032.2 Cucumis melo HOM05D005588 ORTHO05D006615 9.7e-97 357.8 354 54.2
Actinidia24397 Actinidia chinensis HOM05D005588 ORTHO05D006615 1.7e-96 357.1 347 56.8
CsaV3_3G031490 Cucumis sativus L. HOM05D005588 ORTHO05D006615 1.7e-96 357.1 354 54.0
Ciclev10032024m.g Citrus clementina HOM05D005588 ORTHO05D006615 2.8e-96 356.3 338 57.4
Phvul.003G006600 Phaseolus vulgaris HOM05D005588 ORTHO05D006615 4.8e-96 355.5 326 55.8
Actinidia11175 Actinidia chinensis HOM05D005588 ORTHO05D006615 4.1e-95 352.4 347 56.8
Medtr1g036390 Medicago truncatula HOM05D005588 ORTHO05D006615 5.3e-95 352.1 326 57.1
Sopen04g004500 Solanum pennellii HOM05D005588 ORTHO05D006615 1.6e-94 350.5 339 54.0
RcHm_v2.0_Chr4g0446471 Rosa chinensis HOM05D005588 ORTHO05D006615 2.0e-94 350.1 325 51.7
MBI03_g24016_MAGBIO Magnolia biondii HOM05D005588 ORTHO05D006615 5.9e-94 348.6 334 57.2
Cc11_g00190 Coffea canephora HOM05D005588 ORTHO05D006615 1.0e-93 347.8 353 53.8
TAR371G0486 Trochodendron aralioides HOM05D005588 ORTHO05D006615 1.3e-93 347.4 366 51.4
Rhsim06G0125900 Rhododendron simsii HOM05D005588 ORTHO05D006615 5.0e-93 345.5 338 55.3
CSS0004178 Camellia sinensis var. sinensis HOM05D005588 ORTHO05D006615 8.5e-93 344.7 334 56.9
Solyc04g009380.3 Solanum lycopersicum HOM05D005588 ORTHO05D006615 8.5e-93 344.7 320 55.0
TPR.G32342 Trifolium pratense HOM05D005588 ORTHO05D006615 1.1e-92 344.4 326 57.7
Glyma.09G281400 Glycine max HOM05D005588 ORTHO05D006615 1.5e-92 344.0 326 54.6
PGSC0003DMG400032559 Solanum tuberosum HOM05D005588 ORTHO05D006615 1.9e-92 343.6 366 51.4
AT3G18620 Arabidopsis thaliana HOM05D005588 ORTHO05D006615 3.2e-92 342.8 317 54.3
Carub.0003s1840 Capsella rubella HOM05D005588 ORTHO05D006615 3.2e-92 342.8 317 54.3
Eucgr.G02567 Eucalyptus grandis HOM05D005588 ORTHO05D006615 3.2e-92 342.8 319 56.1
AL3G31930 Arabidopsis lyrata HOM05D005588 ORTHO05D006615 2.1e-91 340.1 317 53.6
Nitab4.5_0000139g0120 Nicotiana tabacum HOM05D005588 ORTHO05D006615 2.1e-91 340.1 341 54.8
Nitab4.5_0002113g0130 Nicotiana tabacum HOM05D005588 ORTHO05D006615 2.1e-91 340.1 373 46.4
CARHR094000 Cardamine hirsuta HOM05D005588 ORTHO05D006615 3.6e-91 339.3 314 54.5
Migut.A00690 Erythranthe guttata HOM05D005588 ORTHO05D006615 4.7e-91 339.0 348 53.2
Glyma.20G004400 Glycine max HOM05D005588 ORTHO05D006615 6.1e-91 338.6 325 54.5
A03p40750 Brassica napus HOM05D005588 ORTHO05D006615 8.0e-91 338.2 331 52.9
Atru.chr11.1235 Acer truncatum HOM05D005588 ORTHO05D006615 1.4e-90 337.4 328 56.1
BraA03t13232Z Brassica rapa HOM05D005588 ORTHO05D006615 2.3e-90 336.7 331 52.6
PGR142G3609 Punica granatum HOM05D005588 ORTHO05D006615 5.2e-90 335.5 324 56.2
BcaC01g03687 Brassica carinata HOM05D005588 ORTHO05D006615 6.8e-90 335.1 316 53.8
BolC3t17260H Brassica oleracea HOM05D005588 ORTHO05D006615 6.8e-90 335.1 316 53.8
C03p49620 Brassica napus HOM05D005588 ORTHO05D006615 8.8e-90 334.7 316 53.8
arahy.Tifrunner.gnm1.ann1.HXF7IN Arachis hypogaea HOM05D005588 ORTHO05D006615 1.2e-89 334.3 328 50.3
Sp3g16690 Schrenkiella parvula HOM05D005588 ORTHO05D006615 1.2e-89 334.3 314 54.1
SGA_v2.0_scaffold173G39109 Striga asiatica HOM05D005588 ORTHO05D006615 2.0e-89 333.6 348 52.6
Medtr4g074600 Medicago truncatula HOM05D005588 ORTHO05D006615 2.6e-89 333.2 333 55.0
BcaB04g18995 Brassica carinata HOM05D005588 ORTHO05D006615 4.4e-89 332.4 314 53.8
THA.LOC104820416 Tarenaya hassleriana HOM05D005588 ORTHO05D006615 4.4e-89 332.4 316 55.1
TPR.G8237 Trifolium pratense HOM05D005588 ORTHO05D006615 5.7e-89 332.0 307 58.0
ECA233G4991 Erigeron canadensis HOM05D005588 ORTHO05D006615 2.2e-88 330.1 338 53.0
FAN17G1536 Fragaria x ananassa HOM05D005588 ORTHO05D006615 2.2e-88 330.1 323 52.9
MD16G1000700 Malus domestica HOM05D005588 ORTHO05D006615 2.2e-88 330.1 319 53.6
FvH4_4g36750 Fragaria vesca HOM05D005588 ORTHO05D006615 3.7e-88 329.3 319 53.3
HanXRQChr13g0388111 Helianthus annuus HOM05D005588 ORTHO05D006615 1.8e-87 327.0 346 52.0
Lsat_1_v5_gn_3_33621 Lactuca sativa HOM05D005588 ORTHO05D006615 1.8e-87 327.0 361 50.7
Lalb_Chr04g0258921 Lupinus albus HOM05D005588 ORTHO05D006615 2.4e-87 326.6 326 50.9
FAN07G0754 Fragaria x ananassa HOM05D005588 ORTHO05D006615 4.1e-87 325.9 319 53.3
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 4.1e-87 325.9 347 48.4
Lj6C721G15 Lonicera japonica HOM05D005588 ORTHO05D006615 4.5e-86 322.4 315 55.6
Lsat_1_v5_gn_8_32400 Lactuca sativa HOM05D005588 ORTHO05D006615 7.7e-86 321.6 351 50.1
HanXRQChr17g0540781 Helianthus annuus HOM05D005588 ORTHO05D006615 1.0e-85 321.2 355 51.5
Aa31LG8G5470 Aethionema arabicum HOM05D005588 ORTHO05D006615 1.3e-85 320.9 314 51.3
Nitab4.5_0002392g0080 Nicotiana tabacum HOM05D005588 ORTHO05D006615 4.2e-84 315.8 319 53.0
arahy.Tifrunner.gnm1.ann1.J0Y6Y5 Arachis hypogaea HOM05D005588 ORTHO05D006615 8.9e-82 308.1 351 46.4
arahy.Tifrunner.gnm1.ann1.8S5M3J Arachis hypogaea HOM05D005588 ORTHO05D006615 1.2e-81 307.8 343 49.6
BcaC05g28591 Brassica carinata HOM05D005588 ORTHO05D006615 1.2e-81 307.8 316 51.6
C05p46980 Brassica napus HOM05D005588 ORTHO05D006615 1.2e-81 307.8 316 51.6
BolC5t33427H Brassica oleracea HOM05D005588 ORTHO05D006615 1.2e-81 307.8 316 51.6
ECA246G5122 Erigeron canadensis HOM05D005588 ORTHO05D006615 1.5e-81 307.4 346 51.4
Lalb_Chr17g0338031 Lupinus albus HOM05D005588 ORTHO05D006615 1.5e-81 307.4 326 51.2
arahy.Tifrunner.gnm1.ann1.7Y84RT Arachis hypogaea HOM05D005588 ORTHO05D006615 4.4e-81 305.8 343 49.3
HPP92_024425 Vanilla planifolia HOM05D005588 ORTHO05D006615 4.4e-81 305.8 324 50.0
Sed0008330 Sechium edule HOM05D005588 ORTHO05D006615 1.8e-79 300.4 337 47.8
Lj2g0013630 Lotus japonicus HOM05D005588 ORTHO05D006615 7.0e-79 298.5 297 52.2
BcaB06g25914 Brassica carinata HOM05D005588 ORTHO05D006615 9.2e-79 298.1 311 50.5
BraA05t21941Z Brassica rapa HOM05D005588 ORTHO05D006615 1.0e-77 294.7 316 49.1
A05p30990 Brassica napus HOM05D005588 ORTHO05D006615 1.7e-77 293.9 316 49.1
Zm00001eb433550 Zea mays HOM05D005588 ORTHO05D006615 1.7e-77 293.9 328 48.5
CAN.G624.25 Capsicum annuum HOM05D005588 ORTHO05D006615 2.3e-77 293.5 285 56.1
Zm00001eb066460 Zea mays HOM05D005588 ORTHO05D006615 3.9e-77 292.7 321 47.0
SalBow1G0039 Salvia bowleyana HOM05D005588 ORTHO05D006615 6.1e-75 285.4 342 49.1
CiPaw.09G164500 Carya illinoinensis HOM05D005588 ORTHO05D006615 2.0e-70 270.4 266 54.1
Gohir.D13G024600 Gossypium hirsutum HOM05D005588 ORTHO05D006615 3.9e-69 266.2 266 58.6
Os04g0674450 Oryza sativa ssp. japonica HOM05D005588 ORTHO05D006615 2.6e-65 253.4 280 48.9
Nitab4.5_0007261g0090 Nicotiana tabacum HOM05D005588 ORTHO05D006615 1.7e-64 250.8 350 41.1
ATR0626G258 Amborella trichopoda HOM05D005588 ORTHO05D006615 4.9e-64 249.2 330 45.5
Thhalv10021331m.g Eutrema salsugineum HOM05D005588 ORTHO05D006615 8.3e-64 248.4 250 53.6
Gorai.009G328100 Gossypium raimondii HOM05D005588 ORTHO05D006615 1.4e-63 247.7 216 57.4
Peaxi162Scf00363g00733 Petunia axillaris HOM05D005588 ORTHO05D006615 2.7e-62 243.4 319 43.9
Sabra07G0059300 Salix brachista HOM05D005588 ORTHO05D006615 1.0e-61 241.5 263 54.4
Psat7g173520 Pisum sativum HOM05D005588 ORTHO05D006615 4.7e-59 232.6 255 53.3
QL03p043796 Quercus lobata HOM05D005588 ORTHO05D006615 6.2e-59 232.3 163 63.8
ClCG10G011870 Citrullus lanatus HOM05D005588 ORTHO05D006615 2.3e-58 230.3 403 37.5
MD13G1007300 Malus domestica HOM05D005588 ORTHO05D006615 3.1e-58 229.9 177 57.1
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 5.8e-57 225.7 191 60.7
TWI74G1417 Tripterygium wilfordii HOM05D005588 ORTHO05D006615 9.9e-57 224.9 172 59.3
Mapoly0055s0077 Marchantia polymorpha HOM05D005588 ORTHO05D006615 3.5e-54 216.5 330 39.1
Pp3c16_1360 Physcomitrium patens HOM05D005588 ORTHO05D006615 1.5e-52 211.1 312 39.4
Sed0002544 Sechium edule HOM05D005588 ORTHO05D006615 2.0e-49 200.7 169 54.4
Peaxi162Scf01172g00038 Petunia axillaris HOM05D005588 ORTHO05D006615 2.2e-48 197.2 337 37.7
Gohir.A05G307500 Gossypium hirsutum HOM05D005588 ORTHO05D006615 1.4e-47 194.5 251 44.6
Gohir.D05G307832 Gossypium hirsutum HOM05D005588 ORTHO05D006615 5.4e-47 192.6 169 52.1
SMO146G0139 Selaginella moellendorffii HOM05D005588 ORTHO05D006615 1.0e-45 188.3 319 38.6
SEGI_36505 Sequoiadendron giganteum HOM05D005588 ORTHO05D006615 3.0e-45 186.8 178 50.6
Pp3c13_19220 Physcomitrium patens HOM05D005588 ORTHO05D006615 5.1e-45 186.0 317 36.6
SalBow8G1527 Salvia bowleyana HOM05D005588 ORTHO05D006615 3.3e-44 183.3 338 38.5
Haze_19909 Corylus avellana HOM05D005588 ORTHO05D006615 5.3e-42 176.0 295 39.7
Nn4g24927 Nelumbo nucifera HOM05D005588 ORTHO05D006615 5.4e-39 166.0 289 39.1
COL.COLO4_27672 Corchorus olitorius HOM05D005588 ORTHO05D006615 3.5e-38 163.3 163 47.9
AagrBONN_evm.TU.Sc2ySwM_228.4026 Anthoceros agrestis HOM05D005588 ORTHO05D006615 7.6e-33 145.6 178 43.8
Ca_27076_v3 Cicer arietinum L. HOM05D005588 ORTHO05D006615 8.4e-32 142.1 94 64.9
MD13G1007400 Malus domestica HOM05D005588 ORTHO05D006615 5.6e-28 129.4 140 49.3
vmacro12413 Vaccinium macrocarpon HOM05D005588 ORTHO05D006615 2.1e-27 127.5 159 47.8
CBR_g50402 Chara braunii HOM05D005588 ORTHO05D006615 7.6e-25 119.0 260 33.1
FAN12G1938 Fragaria x ananassa HOM05D005588 ORTHO05D006615 1.9e-23 114.4 75 61.3
DCAR_030400 Daucus carota HOM05D005588 ORTHO05D006615 9.6e-20 102.1 145 43.4
TWI74G1107 Tripterygium wilfordii HOM05D005588 ORTHO05D006615 4.1e-18 96.7 108 49.1
Os06g0308900 Oryza sativa ssp. japonica HOM05D005588 ORTHO05D006615 8.4e-16 89.0 74 56.8
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 4.2e-15 86.7 96 57.3
AagrBONN_evm.TU.Sc2ySwM_362.2362 Anthoceros agrestis HOM05D005588 ORTHO05D006615 2.7e-14 84.0 90 41.1
Hund08538 Selenicereus undatus HOM05D005588 ORTHO05D006615 7.4e-12 75.9 65 63.1
SEGI_31391 Sequoiadendron giganteum HOM05D005588 ORTHO05D006615 3.8e-08 63.5 117 35.0
Aa31LG10G15040 Aethionema arabicum HOM05D000968 ORTHO05D001687 3.2e-07 60.5 75 38.7
A04p01410 Brassica napus HOM05D000968 ORTHO05D001687 3.2e-07 60.5 103 38.8
BraA04t15860Z Brassica rapa HOM05D000968 ORTHO05D001687 3.2e-07 60.5 103 38.8
MD02G1205100 Malus domestica HOM05D000968 ORTHO05D001687 4.2e-07 60.1 147 29.9
Aa31LG1G26900 Aethionema arabicum HOM05D000968 ORTHO05D001687 5.5e-07 59.7 115 36.5
Cfa017353 Carpinus fangiana HOM05D000968 ORTHO05D003096 5.5e-07 59.7 211 27.5
Duzib128G1577 Durio zibethinus HOM05D000968 ORTHO05D003096 1.2e-06 58.5 125 31.2
Lj3g0000673 Lotus japonicus HOM05D000968 ORTHO05D001687 1.6e-06 58.2 113 32.7
Sp5g02450 Schrenkiella parvula HOM05D000968 ORTHO05D001687 1.6e-06 58.2 49 51.0
Aa31LG3G1820 Aethionema arabicum HOM05D000968 ORTHO05D003096 2.7e-06 57.4 148 33.8
BcaB02g08975 Brassica carinata HOM05D000968 ORTHO05D001687 3.6e-06 57.0 131 34.4
BcaC02g12214 Brassica carinata HOM05D000968 ORTHO05D001687 3.6e-06 57.0 131 34.4
BolC4t22257H Brassica oleracea HOM05D000968 ORTHO05D001687 3.6e-06 57.0 131 34.4
Lalb_Chr07g0192961 Lupinus albus HOM05D000968 ORTHO05D003096 3.6e-06 57.0 168 32.1
C05p58680 Brassica napus HOM05D000968 ORTHO05D003096 4.6e-06 56.6 152 32.9
BolC5t34517H Brassica oleracea HOM05D000968 ORTHO05D003096 4.6e-06 56.6 152 32.9
BraA05t19511Z Brassica rapa HOM05D000968 ORTHO05D001687 4.6e-06 56.6 139 33.1
Eucgr.A01284 Eucalyptus grandis HOM05D000968 ORTHO05D003096 4.6e-06 56.6 78 37.2
Hma1.2p1_0936F.1_g238900 Hydrangea macrophylla HOM05D000968 ORTHO05D003096 4.6e-06 56.6 148 30.4
BcaC05g29520 Brassica carinata HOM05D000968 ORTHO05D003096 6.1e-06 56.2 151 32.5
BcaC05g29661 Brassica carinata HOM05D000968 ORTHO05D003096 6.1e-06 56.2 152 31.6
Oeu037918.1 Olea europaea HOM05D000968 ORTHO05D001687 6.1e-06 56.2 134 32.1
AL3G20480 Arabidopsis lyrata HOM05D000968 ORTHO05D003096 7.9e-06 55.8 148 33.8


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