Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22923 Beta vulgaris HOM05D003598 ORTHO05D004198 1.7e-137 492.7 252 100.0
AUR62015205 Chenopodium quinoa HOM05D003598 ORTHO05D004198 5.8e-109 397.9 256 80.5
AUR62017668 Chenopodium quinoa HOM05D003598 ORTHO05D004198 9.3e-107 390.6 256 79.7
AUR62000767 Chenopodium quinoa HOM05D003598 ORTHO05D004198 2.5e-104 382.5 256 78.1
Ah.01g001620 Amaranthus hybridus HOM05D003598 ORTHO05D004198 6.2e-103 377.9 256 76.2
AUR62005202 Chenopodium quinoa HOM05D003598 ORTHO05D004198 6.2e-103 377.9 256 77.3
Ah.01g012930 Amaranthus hybridus HOM05D003598 ORTHO05D004198 6.9e-102 374.4 261 73.9
Hund03395 Selenicereus undatus HOM05D003598 ORTHO05D004198 3.7e-79 298.9 247 61.1
Dinv32105 Davidia involucrata HOM05D003598 ORTHO05D004198 4.6e-74 282.0 257 60.7
CSS0049191 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 6.1e-74 281.6 258 60.1
GSVIVG01010181001 Vitis vinifera HOM05D003598 ORTHO05D004198 7.9e-74 281.2 257 61.5
TWI53G1744 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 8.8e-73 277.7 257 58.8
TWI77G0411 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 1.5e-72 276.9 257 58.8
ECA240G3477 Erigeron canadensis HOM05D003598 ORTHO05D004198 2.0e-72 276.6 256 57.0
Nn4g24926 Nelumbo nucifera HOM05D003598 ORTHO05D004198 2.5e-72 276.2 255 57.6
Atru.chr9.2066 Acer truncatum HOM05D003598 ORTHO05D004198 4.3e-72 275.4 257 58.4
TAR629G0796 Trochodendron aralioides HOM05D003598 ORTHO05D004198 4.8e-71 271.9 202 67.8
vmacro09196 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 1.1e-70 270.8 258 58.5
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 2.4e-70 269.6 258 57.4
QL02p009504 Quercus lobata HOM05D003598 ORTHO05D004198 2.4e-70 269.6 256 57.8
Sed0014776 Sechium edule HOM05D003598 ORTHO05D004198 2.4e-70 269.6 255 57.3
Ciclev10032368m.g Citrus clementina HOM05D003598 ORTHO05D004198 3.1e-70 269.2 258 57.8
Sed0024830 Sechium edule HOM05D003598 ORTHO05D004198 5.3e-70 268.5 255 56.9
Lsat_1_v5_gn_3_7261 Lactuca sativa HOM05D003598 ORTHO05D004198 1.5e-69 266.9 256 56.6
Potri.005G198900 Populus trichocarpa HOM05D003598 ORTHO05D004198 1.5e-69 266.9 257 57.6
Lj6A721G58 Lonicera japonica HOM05D003598 ORTHO05D004198 2.0e-69 266.5 256 56.6
MELO3C024034.2 Cucumis melo HOM05D003598 ORTHO05D004198 4.5e-69 265.4 255 56.5
Actinidia11173 Actinidia chinensis HOM05D003598 ORTHO05D004198 5.9e-69 265.0 259 57.1
COL.COLO4_11873 Corchorus olitorius HOM05D003598 ORTHO05D004198 1.0e-68 264.2 228 60.1
TAR371G1198 Trochodendron aralioides HOM05D003598 ORTHO05D004198 1.0e-68 264.2 255 57.3
CSS0011637 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D000909 1.7e-68 263.5 248 58.1
Duzib133G1064 Durio zibethinus HOM05D003598 ORTHO05D004198 2.2e-68 263.1 231 59.7
Aqoxy3G01046 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 6.5e-68 261.5 257 58.0
MSTRG.1768 Avicennia marina HOM05D003598 ORTHO05D004198 8.5e-68 261.2 255 57.3
HanXRQChr03g0086691 Helianthus annuus HOM05D003598 ORTHO05D004198 8.5e-68 261.2 246 58.5
CsaV3_3G031510 Cucumis sativus L. HOM05D003598 ORTHO05D004198 1.1e-67 260.8 255 55.3
Cfa013868 Carpinus fangiana HOM05D003598 ORTHO05D004198 1.4e-67 260.4 256 54.7
Migut.E01352 Erythranthe guttata HOM05D003598 ORTHO05D004198 3.2e-67 259.2 256 57.8
Hma1.2p1_0218F.1_g092550 Hydrangea macrophylla HOM05D003598 ORTHO05D004198 3.2e-67 259.2 222 62.2
Ca_03027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 5.5e-67 258.5 256 55.5
Manes.01G073300 Manihot esculenta HOM05D003598 ORTHO05D004198 1.2e-66 257.3 257 56.4
Prupe.1G345400 Prunus persica HOM05D003598 ORTHO05D004198 1.2e-66 257.3 258 55.4
COL.COLO4_09060 Corchorus olitorius HOM05D003598 ORTHO05D004198 1.6e-66 256.9 237 57.8
Glyma.11G103000 Glycine max HOM05D003598 ORTHO05D004198 2.1e-66 256.5 264 55.3
SGA_v2.0_scaffold144G35883 Striga asiatica HOM05D003598 ORTHO05D004198 2.1e-66 256.5 227 61.2
Duzib138G0618 Durio zibethinus HOM05D003598 ORTHO05D004198 2.7e-66 256.1 226 58.8
DCAR_002566 Daucus carota HOM05D003598 ORTHO05D004198 3.6e-66 255.8 265 54.3
Gohir.A11G124700 Gossypium hirsutum HOM05D003598 ORTHO05D004198 4.7e-66 255.4 231 57.6
Gohir.D11G129900 Gossypium hirsutum HOM05D003598 ORTHO05D004198 4.7e-66 255.4 231 57.6
Gorai.007G139000 Gossypium raimondii HOM05D003598 ORTHO05D004198 4.7e-66 255.4 231 57.6
MBI03_g24013_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 7.9e-66 254.6 255 55.3
CiPaw.07G157700 Carya illinoinensis HOM05D003598 ORTHO05D004198 1.0e-65 254.2 256 55.1
Sc10g0007060 Simmondsia chinensis HOM05D003598 ORTHO05D004198 1.0e-65 254.2 232 57.3
HanXRQChr17g0533671 Helianthus annuus HOM05D003598 ORTHO05D004198 1.4e-65 253.8 229 59.0
Thecc.01G274200 Theobroma cacao HOM05D003598 ORTHO05D004198 1.4e-65 253.8 259 54.1
PSO782G0946 Papaver somniferum HOM05D003598 ORTHO05D004198 1.8e-65 253.4 259 53.3
Rhsim06G0126100 Rhododendron simsii HOM05D003598 ORTHO05D004198 2.3e-65 253.1 258 55.4
arahy.Tifrunner.gnm1.ann1.01A9SY Arachis hypogaea HOM05D003598 ORTHO05D004198 3.0e-65 252.7 257 53.3
CiPaw.08G060100 Carya illinoinensis HOM05D003598 ORTHO05D004198 3.9e-65 252.3 256 54.7
arahy.Tifrunner.gnm1.ann1.Y4R7AD Arachis hypogaea HOM05D003598 ORTHO05D004198 6.7e-65 251.5 257 52.9
Aqoxy2G02255 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 8.8e-65 251.1 196 64.8
Lj3g0003654 Lotus japonicus HOM05D003598 ORTHO05D004198 8.8e-65 251.1 259 55.6
Lalb_Chr03g0024851 Lupinus albus HOM05D003598 ORTHO05D004198 1.1e-64 250.8 255 53.7
Potri.002G062200 Populus trichocarpa HOM05D003598 ORTHO05D004198 1.5e-64 250.4 261 53.3
Glyma.12G141400 Glycine max HOM05D003598 ORTHO05D004198 2.6e-64 249.6 256 54.7
PSO063G0008 Papaver somniferum HOM05D003598 ORTHO05D004198 2.6e-64 249.6 259 52.5
SalBow8G4212 Salvia bowleyana HOM05D003598 ORTHO05D004198 2.6e-64 249.6 255 55.7
Medtr4g074480 Medicago truncatula HOM05D003598 ORTHO05D004198 9.7e-64 247.7 256 53.9
Aa31LG11G11250 Aethionema arabicum HOM05D003598 ORTHO05D004198 1.3e-63 247.3 257 50.2
DCAR_030401 Daucus carota HOM05D003598 ORTHO05D004198 1.3e-63 247.3 238 56.3
Gohir.D08G204800 Gossypium hirsutum HOM05D003598 ORTHO05D004198 1.3e-63 247.3 223 57.8
THA.LOC104802853 Tarenaya hassleriana HOM05D003598 ORTHO05D004198 1.3e-63 247.3 257 53.7
Cc08_g05000 Coffea canephora HOM05D003598 ORTHO05D004198 1.7e-63 246.9 255 56.1
Medtr4g108000 Medicago truncatula HOM05D003598 ORTHO05D004198 1.7e-63 246.9 255 53.7
Gorai.004G216900 Gossypium raimondii HOM05D003598 ORTHO05D004198 2.2e-63 246.5 260 53.1
Phvul.L003737 Phaseolus vulgaris HOM05D003598 ORTHO05D004198 2.2e-63 246.5 256 53.5
MD16G1000500 Malus domestica HOM05D003598 ORTHO05D004198 4.8e-63 245.4 255 54.1
Oeu042207.1 Olea europaea HOM05D003598 ORTHO05D004198 4.8e-63 245.4 198 66.2
Hund19509 Selenicereus undatus HOM05D003598 ORTHO05D004198 4.8e-63 245.4 229 60.7
PGR042G0762 Punica granatum HOM05D003598 ORTHO05D004198 6.3e-63 245.0 258 53.1
MBI06_g34034_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 8.2e-63 244.6 255 52.9
vmacro12412 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 8.2e-63 244.6 199 63.8
MD13G1007600 Malus domestica HOM05D003598 ORTHO05D004198 1.1e-62 244.2 255 54.5
VMungo1127G1291 Vigna mungo HOM05D003598 ORTHO05D004198 1.1e-62 244.2 228 58.3
MBI06_g36503_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 1.4e-62 243.8 255 52.5
Oeu045722.3 Olea europaea HOM05D003598 ORTHO05D004198 1.4e-62 243.8 227 57.7
ATR0618G278 Amborella trichopoda HOM05D003598 ORTHO05D004198 1.8e-62 243.4 258 51.9
Cpa.g.sc51.45 Carica papaya HOM05D003598 ORTHO05D004198 1.8e-62 243.4 255 51.8
Sopen03g038270 Solanum pennellii HOM05D003598 ORTHO05D004198 1.8e-62 243.4 256 53.1
PGSC0003DMG400005723 Solanum tuberosum HOM05D003598 ORTHO05D004198 1.8e-62 243.4 256 53.1
Gohir.A08G186600 Gossypium hirsutum HOM05D003598 ORTHO05D004198 2.4e-62 243.0 260 53.1
Solyc03g119420.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 2.4e-62 243.0 256 52.7
Sabra05G0151500 Salix brachista HOM05D003598 ORTHO05D004198 3.1e-62 242.7 237 57.0
Rhsim04G0081000 Rhododendron simsii HOM05D003598 ORTHO05D004198 4.1e-62 242.3 249 55.0
THA.LOC104820751 Tarenaya hassleriana HOM05D003598 ORTHO05D004198 4.1e-62 242.3 257 52.9
CAN.G1425.3 Capsicum annuum HOM05D003598 ORTHO05D004198 7.0e-62 241.5 256 53.5
Peaxi162Scf00193g00013 Petunia axillaris HOM05D003598 ORTHO05D004198 7.0e-62 241.5 255 52.2
unitig_899.g14735 Utricularia gibba HOM05D003598 ORTHO05D004198 7.0e-62 241.5 232 59.1
CSS0032311 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 1.5e-61 240.4 216 59.3
Psat7g173800 Pisum sativum HOM05D003598 ORTHO05D004198 2.0e-61 240.0 255 52.2
TPR.G32324 Trifolium pratense HOM05D003598 ORTHO05D004198 2.0e-61 240.0 257 52.5
CANSAT64G1690 Cannabis sativa HOM05D003598 ORTHO05D004198 2.6e-61 239.6 257 53.7
CARHR194630 Cardamine hirsuta HOM05D003598 ORTHO05D004198 3.5e-61 239.2 260 51.2
Sc20g0002190 Simmondsia chinensis HOM05D003598 ORTHO05D004198 3.5e-61 239.2 213 59.6
A10p21130 Brassica napus HOM05D003598 ORTHO05D004198 4.5e-61 238.8 260 50.0
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 4.5e-61 238.8 257 55.6
Sopen08g024380 Solanum pennellii HOM05D003598 ORTHO05D004198 1.0e-60 237.7 256 50.8
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 1.3e-60 237.3 257 54.5
Nitab4.5_0001450g0070 Nicotiana tabacum HOM05D003598 ORTHO05D004198 1.7e-60 236.9 259 51.4
Solyc08g075730.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 2.2e-60 236.5 256 50.4
PGSC0003DMG400030870 Solanum tuberosum HOM05D003598 ORTHO05D004198 2.2e-60 236.5 256 50.8
Nitab4.5_0002941g0020 Nicotiana tabacum HOM05D003598 ORTHO05D004198 3.8e-60 235.7 255 52.5
Ah.07g198410 Amaranthus hybridus HOM05D003598 ORTHO05D004198 5.0e-60 235.3 128 87.5
Sp6g25920 Schrenkiella parvula HOM05D003598 ORTHO05D004198 6.5e-60 235.0 256 50.4
BcaC04g18694 Brassica carinata HOM05D003598 ORTHO05D004198 8.5e-60 234.6 253 51.0
FvH4_4g36731 Fragaria vesca HOM05D003598 ORTHO05D004198 8.5e-60 234.6 256 54.3
AL6G29630 Arabidopsis lyrata HOM05D003598 ORTHO05D004198 1.1e-59 234.2 256 50.8
Carub.0006s1666 Capsella rubella HOM05D003598 ORTHO05D004198 5.5e-59 231.9 253 50.2
Carub.0008s0217 Capsella rubella HOM05D003598 ORTHO05D004198 5.5e-59 231.9 256 50.8
Zm00001eb066470 Zea mays HOM05D003598 ORTHO05D004198 2.1e-58 229.9 254 50.8
AT5G18400 Arabidopsis thaliana HOM05D003598 ORTHO05D004198 3.6e-58 229.2 256 50.0
Zm00001eb066420 Zea mays HOM05D003598 ORTHO05D004198 3.6e-58 229.2 254 50.8
RcHm_v2.0_Chr4g0446451 Rosa chinensis HOM05D003598 ORTHO05D004198 4.7e-58 228.8 257 52.9
A03p08820 Brassica napus HOM05D003598 ORTHO05D004198 8.0e-58 228.0 264 48.1
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 1.8e-57 226.9 257 48.2
BolC3t13511H Brassica oleracea HOM05D003598 ORTHO05D004198 1.8e-57 226.9 257 48.2
BraA03t10207Z Brassica rapa HOM05D003598 ORTHO05D004198 1.8e-57 226.9 257 48.2
C03p10310 Brassica napus HOM05D003598 ORTHO05D004198 3.0e-57 226.1 264 48.1
Os04g0682050 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 3.9e-57 225.7 258 50.0
Os04g0674400 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 5.2e-57 225.3 256 50.0
Nitab4.5_0001659g0130 Nicotiana tabacum HOM05D003598 ORTHO05D004198 1.1e-56 224.2 276 48.2
SGA_v2.0_scaffold277G46719 Striga asiatica HOM05D003598 ORTHO05D004198 5.7e-56 221.9 157 70.7
Dinv05241 Davidia involucrata HOM05D003598 ORTHO05D004198 9.7e-56 221.1 231 55.4
Sabra02G0050100 Salix brachista HOM05D003598 ORTHO05D004198 2.8e-55 219.5 257 50.2
Cc08_g04900 Coffea canephora HOM05D003598 ORTHO05D004198 6.3e-55 218.4 209 57.4
Thhalv10015717m.g Eutrema salsugineum HOM05D003598 ORTHO05D004198 8.2e-55 218.0 254 49.6
SEGI_23700 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 5.3e-54 215.3 221 54.3
Nn6g34923 Nelumbo nucifera HOM05D003598 ORTHO05D004198 7.7e-53 211.5 260 46.5
Haze_22545 Corylus avellana HOM05D003598 ORTHO05D004198 1.7e-52 210.3 234 50.9
CDE04G2679 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 2.9e-52 209.5 258 47.7
Hund19574 Selenicereus undatus HOM05D003598 ORTHO05D004198 6.5e-52 208.4 119 85.7
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 8.5e-52 208.0 256 49.2
SEGI_19284 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 5.5e-51 205.3 243 49.8
HPP92_009730 Vanilla planifolia HOM05D003598 ORTHO05D004198 5.5e-51 205.3 238 49.2
Eucgr.J00852 Eucalyptus grandis HOM05D003598 ORTHO05D004198 2.1e-50 203.4 233 52.4
BolC9t58693H Brassica oleracea HOM05D003598 ORTHO05D004198 6.1e-50 201.8 256 45.3
Ca_14027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 2.6e-48 196.4 231 50.6
Cc00_g23020 Coffea canephora HOM05D003598 ORTHO05D004198 4.4e-48 195.7 207 56.5
Hund31482 Selenicereus undatus HOM05D003598 ORTHO05D004198 7.5e-48 194.9 112 84.8
Hund19575 Selenicereus undatus HOM05D003598 ORTHO05D004198 9.7e-48 194.5 109 84.4
BraA10t44179Z Brassica rapa HOM05D001989 ORTHO05D004198 1.9e-43 180.3 231 45.9
CDE02G3181 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 2.7e-42 176.4 226 44.7
Prupe.8G036300 Prunus persica HOM05D003598 ORTHO05D004198 8.0e-42 174.9 239 45.2
CsaV3_3G032510 Cucumis sativus L. HOM05D003598 ORTHO05D004198 2.3e-41 173.3 97 84.5
Cc00_g17080 Coffea canephora HOM05D003598 ORTHO05D004198 4.0e-41 172.6 251 43.4
Sc06g0004000 Simmondsia chinensis HOM05D003598 ORTHO05D004198 3.4e-40 169.5 182 50.5
SMO367G0289 Selaginella moellendorffii HOM05D003598 ORTHO05D004198 2.2e-39 166.8 247 41.7
ClCG10G011850 Citrullus lanatus HOM05D003598 ORTHO05D004198 6.3e-39 165.2 230 43.0
CDE05G0161 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 3.1e-38 162.9 200 44.5
Mapoly0032s0120 Marchantia polymorpha HOM05D003598 ORTHO05D004198 1.6e-37 160.6 278 38.8
Glyma.U018351 Glycine max HOM05D003598 ORTHO05D004198 3.5e-37 159.5 99 76.8
CDE05G1904 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 5.9e-37 158.7 115 62.6
Cc08_g04800 Coffea canephora HOM05D003598 ORTHO05D004198 5.9e-37 158.7 206 48.5
Lsat_1_v5_gn_3_62741 Lactuca sativa HOM05D003598 ORTHO05D004198 4.2e-35 152.5 102 74.5
SGA_v2.0_scaffold49G18286 Striga asiatica HOM05D003598 ORTHO05D004198 4.2e-35 152.5 130 59.2
QL09p042139 Quercus lobata HOM05D003598 ORTHO05D004198 4.7e-34 149.1 196 45.9
AagrBONN_evm.TU.Sc2ySwM_368.147 Anthoceros agrestis HOM05D003598 ORTHO05D004198 6.1e-34 148.7 309 35.3
Pp3c13_7070 Physcomitrium patens HOM05D003598 ORTHO05D004198 8.0e-34 148.3 279 37.3
Pp3c8_19850 Physcomitrium patens HOM05D003598 ORTHO05D004198 2.2e-31 140.2 279 35.8
Lj1g0005490 Lotus japonicus HOM05D003598 ORTHO05D004198 1.1e-30 137.9 204 43.6
CBR_g263 Chara braunii HOM05D003598 ORTHO05D004198 3.2e-30 136.3 293 33.4
RcHm_v2.0_Chr3g0449691 Rosa chinensis HOM05D003598 ORTHO05D004198 1.2e-29 134.4 171 48.0
Lsat_1_v5_gn_6_87300 Lactuca sativa HOM05D003598 ORTHO05D004198 1.3e-28 131.0 194 42.3
Cc00_g26130 Coffea canephora HOM05D003598 ORTHO05D004198 7.5e-24 115.2 185 44.3
BcaNung04934 Brassica carinata HOM05D003598 ORTHO05D004198 1.3e-23 114.4 72 70.8
PRCOL_00002502 Prasinoderma coloniale HOM05D003598 ORTHO05D004198 1.4e-22 110.9 230 36.1
Lsat_1_v5_gn_6_87320 Lactuca sativa HOM05D003598 ORTHO05D009814 1.1e-19 101.3 194 38.1
Cre11.g475350 Chlamydomonas reinhardtii HOM05D003598 ORTHO05D004198 1.5e-19 100.9 255 28.6
Actinidia24398 Actinidia chinensis HOM05D003598 ORTHO05D004198 2.6e-16 90.1 50 78.0
MCO04G029 Micromonas commoda HOM05D003598 ORTHO05D004198 3.1e-09 66.6 58 51.7
Cfa022453 Carpinus fangiana HOM05D003598 ORTHO05D004198 3.4e-08 63.2 139 35.3
QL09p042102 Quercus lobata HOM05D003598 ORTHO05D004198 3.4e-08 63.2 116 38.8
Ca_03029_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 2.9e-07 60.1 25 96.0
TPR.G20575 Trifolium pratense HOM05D003598 ORTHO05D004198 2.4e-06 57.0 120 36.7
Cc08_g04950 Coffea canephora HOM05D003598 ORTHO05D004198 3.2e-06 56.6 94 37.2


User provided reference genes

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