Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 1.2e-53 213.0 101 100.0
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 5.6e-51 204.1 101 96.0
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 8.3e-47 190.3 95 92.6
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.6e-26 122.9 95 58.9
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 6.2e-26 120.9 97 57.7
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 4.0e-25 118.2 97 55.7
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 1.7e-23 112.8 89 56.2
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 1.4e-17 93.2 99 45.5
EL10Ac9g21055 Beta vulgaris HOM05D002858 ORTHO05D003161 1.0e-12 77.0 71 59.2
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 1.1e-09 67.0 88 36.4
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 1.8e-09 66.2 68 39.7
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 6.9e-09 64.3 94 30.9
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 6.9e-09 64.3 77 39.0
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 6.9e-09 64.3 85 36.5
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 9.0e-09 63.9 68 41.2
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 9.0e-09 63.9 71 42.3
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 9.0e-09 63.9 68 41.2
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.2e-08 63.5 68 42.6
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.2e-08 63.5 68 41.2
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-08 63.2 94 30.9
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 2.6e-08 62.4 70 40.0
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 2.6e-08 62.4 86 38.4
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 4.5e-08 61.6 73 38.4
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 4.5e-08 61.6 73 38.4
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 4.5e-08 61.6 73 38.4
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 5.8e-08 61.2 74 36.5
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 5.8e-08 61.2 67 43.3
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 7.6e-08 60.8 73 38.4
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 7.6e-08 60.8 73 38.4
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 1.3e-07 60.1 80 36.2
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.3e-07 60.1 67 38.8
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 1.3e-07 60.1 71 40.8
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.7e-07 59.7 62 40.3
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 1.7e-07 59.7 73 41.1
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 1.7e-07 59.7 72 38.9
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 2.2e-07 59.3 68 41.2
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 2.2e-07 59.3 78 35.9
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 2.2e-07 59.3 78 35.9
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 2.9e-07 58.9 93 30.1
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 2.9e-07 58.9 69 39.1
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 2.9e-07 58.9 73 38.4
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 2.9e-07 58.9 73 38.4
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 2.9e-07 58.9 74 36.5
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 3.8e-07 58.5 88 37.5
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 6.4e-07 57.8 77 33.8
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 8.4e-07 57.4 68 33.8
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 8.4e-07 57.4 70 38.6
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 1.1e-06 57.0 73 34.2
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 1.1e-06 57.0 71 35.2
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.1e-06 57.0 71 36.6
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.1e-06 57.0 74 35.1
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.1e-06 57.0 68 35.3
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 1.1e-06 57.0 71 36.6
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 1.4e-06 56.6 71 38.0
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 2.4e-06 55.8 71 32.4
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.4e-06 55.8 89 37.1
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-06 55.8 73 35.6
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 2.4e-06 55.8 71 38.0
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 3.2e-06 55.5 70 35.7
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.2e-06 55.5 89 37.1
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 3.2e-06 55.5 68 36.8
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 3.2e-06 55.5 68 30.9
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 3.2e-06 55.5 68 30.9
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.2e-06 55.5 68 30.9
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 3.2e-06 55.5 71 36.6
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 4.2e-06 55.1 74 36.5
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 5.5e-06 54.7 74 32.4
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 5.5e-06 54.7 62 37.1
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 5.5e-06 54.7 70 41.4
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 5.5e-06 54.7 85 34.1
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 5.5e-06 54.7 71 36.6
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 5.5e-06 54.7 71 38.0
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 5.5e-06 54.7 69 31.9
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 7.1e-06 54.3 70 37.1
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 7.1e-06 54.3 71 36.6
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 9.3e-06 53.9 71 35.2


User provided reference genes

Program Settings