Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22807 Beta vulgaris HOM05D006530 ORTHO05D008283 0.0e+00 1308.5 682 100.0
AUR62015107 Chenopodium quinoa HOM05D006530 ORTHO05D008283 1.7e-243 846.3 705 66.7
AUR62017570 Chenopodium quinoa HOM05D006530 ORTHO05D008283 5.8e-236 821.2 703 64.9
Hund24188 Selenicereus undatus HOM05D006530 ORTHO05D008283 5.3e-197 691.8 724 55.7
COL.COLO4_32787 Corchorus olitorius HOM05D006530 ORTHO05D008283 1.0e-176 624.4 702 51.7
Thecc.01G184900 Theobroma cacao HOM05D006530 ORTHO05D008283 2.8e-174 616.3 705 51.6
Duzib133G1057 Durio zibethinus HOM05D006530 ORTHO05D008283 1.1e-173 614.4 708 52.0
Atru.chr6.3294 Acer truncatum HOM05D006530 ORTHO05D008283 6.9e-173 611.7 713 50.5
Atru.chr6.3278 Acer truncatum HOM05D006530 ORTHO05D008283 3.4e-172 609.4 713 50.4
Hma1.2p1_0445F.1_g154110 Hydrangea macrophylla HOM05D006530 ORTHO05D008283 6.5e-171 605.1 682 51.8
Ciclev10014523m.g Citrus clementina HOM05D006530 ORTHO05D008283 5.1e-168 595.5 703 50.2
Gohir.A07G188400 Gossypium hirsutum HOM05D006530 ORTHO05D008283 7.4e-167 591.7 704 50.0
Gorai.001G218200 Gossypium raimondii HOM05D006530 ORTHO05D008283 7.4e-167 591.7 706 49.6
CSS0049970 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 3.1e-165 586.3 713 49.5
Haze_12746 Corylus avellana HOM05D006530 ORTHO05D008283 4.1e-165 585.9 686 51.2
Cfa014298 Carpinus fangiana HOM05D006530 ORTHO05D008283 6.9e-165 585.1 693 50.8
CSS0002282 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 1.5e-164 583.9 713 49.2
TWI18G1412 Tripterygium wilfordii HOM05D006530 ORTHO05D008283 3.2e-162 576.2 691 51.2
MD09G1117000 Malus domestica HOM05D006530 ORTHO05D008283 1.6e-161 573.9 698 50.3
Gohir.D07G195000 Gossypium hirsutum HOM05D006530 ORTHO05D008283 5.1e-160 568.9 712 48.5
MELO3C019717.2 Cucumis melo HOM05D006530 ORTHO05D008283 3.7e-158 562.8 731 46.8
Lalb_Chr08g0236491 Lupinus albus HOM05D006530 ORTHO05D008283 8.2e-158 561.6 689 47.6
Rhsim06G0169800 Rhododendron simsii HOM05D006530 ORTHO05D008283 1.1e-157 561.2 699 49.1
Aqoxy1G02869 Aquilegia oxysepala HOM05D006530 ORTHO05D008283 7.0e-157 558.5 739 47.1
Eucgr.K00730 Eucalyptus grandis HOM05D006530 ORTHO05D008283 7.7e-156 555.1 715 46.4
Cpa.g.sc132.47 Carica papaya HOM05D006530 ORTHO05D008283 1.0e-155 554.7 666 50.8
CsaV3_6G015570 Cucumis sativus L. HOM05D006530 ORTHO05D008283 1.0e-155 554.7 727 46.6
FvH4_6g41820 Fragaria vesca HOM05D006530 ORTHO05D008283 1.5e-154 550.8 706 48.2
Prupe.3G206900 Prunus persica HOM05D006530 ORTHO05D008283 1.5e-154 550.8 730 47.4
TAR624G0329 Trochodendron aralioides HOM05D006530 ORTHO05D008283 5.5e-154 548.9 759 45.7
Medtr3g082840 Medicago truncatula HOM05D006530 ORTHO05D008283 7.2e-154 548.5 680 48.2
RcHm_v2.0_Chr2g0157621 Rosa chinensis HOM05D006530 ORTHO05D008283 7.2e-154 548.5 702 48.1
Nn1g03345 Nelumbo nucifera HOM05D006530 ORTHO05D008283 9.4e-154 548.1 726 46.0
PSO541G4152 Papaver somniferum HOM05D006530 ORTHO05D008283 2.1e-153 547.0 717 47.3
FAN09G3579 Fragaria x ananassa HOM05D006530 ORTHO05D008283 6.1e-153 545.4 697 47.9
DCAR_019250 Daucus carota HOM05D006530 ORTHO05D008283 3.0e-152 543.1 713 47.0
Potri.014G160400 Populus trichocarpa HOM05D006530 ORTHO05D008283 1.1e-151 541.2 715 46.0
Nitab4.5_0000622g0140 Nicotiana tabacum HOM05D006530 ORTHO05D008283 2.6e-151 540.0 700 48.6
THA.LOC104808864 Tarenaya hassleriana HOM05D006530 ORTHO05D008283 2.6e-151 540.0 690 47.1
Manes.12G056700 Manihot esculenta HOM05D006530 ORTHO05D008283 7.4e-151 538.5 825 42.2
Ca_16350_v3 Cicer arietinum L. HOM05D006530 ORTHO05D008283 6.3e-150 535.4 680 46.9
Psat5g104000 Pisum sativum HOM05D006530 ORTHO05D008283 1.8e-149 533.9 676 47.0
QL08p029933 Quercus lobata HOM05D006530 ORTHO05D008283 2.4e-149 533.5 736 46.2
Glyma.20G058500 Glycine max HOM05D006530 ORTHO05D008283 3.1e-149 533.1 687 47.0
Sabra14G0122100 Salix brachista HOM05D006530 ORTHO05D008283 5.3e-149 532.3 722 45.4
MSTRG.14123 Avicennia marina HOM05D006530 ORTHO05D008283 9.1e-149 531.6 683 47.9
PGR142G2443 Punica granatum HOM05D006530 ORTHO05D008283 9.1e-149 531.6 823 42.0
Lj1A785T50 Lonicera japonica HOM05D006530 ORTHO05D008283 1.6e-148 530.8 723 45.0
Sopen12g001950 Solanum pennellii HOM05D006530 ORTHO05D008283 1.7e-147 527.3 696 47.0
CANSAT64G1714 Cannabis sativa HOM05D006530 ORTHO05D008283 8.5e-147 525.0 715 45.5
Cc05_g02470 Coffea canephora HOM05D006530 ORTHO05D008283 8.5e-147 525.0 678 48.7
GSVIVG01030533001 Vitis vinifera HOM05D006530 ORTHO05D008283 1.5e-146 524.2 651 48.7
AT5G35690 Arabidopsis thaliana HOM05D006530 ORTHO05D008283 5.5e-146 522.3 687 45.9
Sp7g06570 Schrenkiella parvula HOM05D006530 ORTHO05D008283 1.2e-145 521.2 678 47.1
arahy.Tifrunner.gnm1.ann1.KP8KK1 Arachis hypogaea HOM05D006530 ORTHO05D008283 8.0e-145 518.5 677 45.9
arahy.Tifrunner.gnm1.ann1.B2HSRW Arachis hypogaea HOM05D006530 ORTHO05D008283 1.0e-144 518.1 680 45.6
Phvul.006G013400 Phaseolus vulgaris HOM05D006530 ORTHO05D008283 1.4e-144 517.7 683 46.1
SalBow3G0397 Salvia bowleyana HOM05D006530 ORTHO05D008283 1.4e-144 517.7 688 45.9
Aa31sc124G40 Aethionema arabicum HOM05D006530 ORTHO05D008283 1.8e-144 517.3 683 46.4
VMungo0540G0580 Vigna mungo HOM05D006530 ORTHO05D008283 1.8e-144 517.3 684 47.5
CAN.G931.8 Capsicum annuum HOM05D006530 ORTHO05D008283 3.0e-144 516.5 709 47.0
Solyc12g005980.2 Solanum lycopersicum HOM05D006530 ORTHO05D008283 4.0e-144 516.2 696 47.0
PGSC0003DMG400013890 Solanum tuberosum HOM05D006530 ORTHO05D008283 4.0e-144 516.2 704 46.9
Lj6g0023666 Lotus japonicus HOM05D006530 ORTHO05D008283 2.6e-143 513.5 690 46.1
Carub.0007s3142 Capsella rubella HOM05D006530 ORTHO05D008283 9.7e-143 511.5 682 45.6
ECA236G0541 Erigeron canadensis HOM05D006530 ORTHO05D008283 1.7e-142 510.8 690 46.8
Peaxi162Scf00047g02037 Petunia axillaris HOM05D006530 ORTHO05D008283 4.8e-142 509.2 714 46.2
BcaC02g09488 Brassica carinata HOM05D006530 ORTHO05D008283 5.3e-141 505.8 668 45.8
Os08g0500800 Oryza sativa ssp. japonica HOM05D006530 ORTHO05D008283 9.1e-141 505.0 728 43.5
AL7G44540 Arabidopsis lyrata HOM05D006530 ORTHO05D008283 1.2e-140 504.6 693 45.6
CARHR217000 Cardamine hirsuta HOM05D006530 ORTHO05D008283 1.2e-140 504.6 679 44.3
BolC4t25914H Brassica oleracea HOM05D006530 ORTHO05D008283 5.9e-140 502.3 668 45.7
HanXRQChr16g0508331 Helianthus annuus HOM05D006530 ORTHO05D008283 5.9e-140 502.3 682 45.6
Nitab4.5_0005875g0040 Nicotiana tabacum HOM05D006530 ORTHO05D008283 7.7e-140 501.9 687 45.9
Zm00001eb034180 Zea mays HOM05D006530 ORTHO05D008283 7.7e-140 501.9 716 43.4
C04p43360 Brassica napus HOM05D006530 ORTHO05D008283 1.3e-139 501.1 668 45.5
Sed0022132 Sechium edule HOM05D006530 ORTHO05D008283 4.2e-138 496.1 853 39.3
A04p09880 Brassica napus HOM05D006530 ORTHO05D008283 9.4e-138 495.0 671 44.9
BraA04t16650Z Brassica rapa HOM05D006530 ORTHO05D008283 9.4e-138 495.0 671 44.9
SalBow1G8616 Salvia bowleyana HOM05D006530 ORTHO05D008283 9.4e-138 495.0 742 43.4
Migut.H01255 Erythranthe guttata HOM05D006530 ORTHO05D008283 2.1e-137 493.8 693 45.0
vmacro12144 Vaccinium macrocarpon HOM05D006530 ORTHO05D008283 1.8e-136 490.7 814 42.6
Thhalv10003827m.g Eutrema salsugineum HOM05D006530 ORTHO05D008283 2.3e-136 490.3 669 45.1
Dinv08706 Davidia involucrata HOM05D006530 ORTHO05D008283 4.4e-135 486.1 632 47.2
BcaB06g26968 Brassica carinata HOM05D006530 ORTHO05D008283 1.2e-132 478.0 670 43.3
CiPaw.03G274100 Carya illinoinensis HOM05D006530 ORTHO05D008283 4.5e-132 476.1 624 48.1
FAN14G2540 Fragaria x ananassa HOM05D006530 ORTHO05D008283 3.8e-131 473.0 706 44.5
unitig_26.g9922 Utricularia gibba HOM05D006530 ORTHO05D008283 5.0e-131 472.6 673 43.8
Oeu061995.2 Olea europaea HOM05D006530 ORTHO05D008283 1.2e-129 468.0 798 41.0
Sc20g0005070 Simmondsia chinensis HOM05D006530 ORTHO05D008283 1.2e-129 468.0 631 46.8
Lsat_1_v5_gn_7_94721 Lactuca sativa HOM05D006530 ORTHO05D008283 2.0e-127 460.7 684 43.4
ATR1128G020 Amborella trichopoda HOM05D006530 ORTHO05D008283 4.4e-127 459.5 823 38.0
HPP92_018405 Vanilla planifolia HOM05D006530 ORTHO05D008283 1.7e-126 457.6 688 41.7
CDE10G0969 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 3.7e-126 456.4 789 38.1
Actinidia09758 Actinidia chinensis HOM05D006530 ORTHO05D008283 4.7e-121 439.5 729 41.0
FAN02G4367 Fragaria x ananassa HOM05D006530 ORTHO05D008283 3.1e-112 410.2 380 58.4
Pp3c20_8530 Physcomitrium patens HOM05D006530 ORTHO05D008283 1.5e-111 407.9 715 39.4
CDE10G0956 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 4.3e-98 363.2 789 34.3
ATR1001G009 Amborella trichopoda HOM05D006530 ORTHO05D008283 5.8e-95 352.8 313 55.9
SEGI_28144 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 3.0e-91 340.5 353 53.0
AagrBONN_evm.TU.Sc2ySwM_228.92 Anthoceros agrestis HOM05D006530 ORTHO05D008283 4.3e-90 336.7 753 33.3
BcaB06g26965 Brassica carinata HOM05D006530 ORTHO05D008283 3.4e-87 327.0 574 38.5
Mapoly0071s0087 Marchantia polymorpha HOM05D006530 ORTHO05D008283 1.8e-80 304.7 454 42.1
SGA_v2.0_scaffold49G18363 Striga asiatica HOM05D006530 ORTHO05D008283 9.0e-80 302.4 680 31.5
TPR.G22470 Trifolium pratense HOM05D006530 ORTHO05D008283 4.6e-76 290.0 200 68.5
TPR.G7490 Trifolium pratense HOM05D006530 ORTHO05D008283 6.2e-65 253.1 476 37.8
ClCG02G018190 Citrullus lanatus HOM05D006530 ORTHO05D008283 6.1e-52 209.9 697 29.8
MD17G1108500 Malus domestica HOM05D006530 ORTHO05D008283 3.1e-40 171.0 670 27.5
FAN03G2558 Fragaria x ananassa HOM05D006530 ORTHO05D008283 4.5e-39 167.2 146 56.2
MCO07G103 Micromonas commoda HOM05D006530 ORTHO05D008283 5.5e-37 160.2 307 34.5
Cre16.g684000 Chlamydomonas reinhardtii HOM05D006530 ORTHO05D008283 1.2e-36 159.1 335 31.9
FAN15G1469 Fragaria x ananassa HOM05D006530 ORTHO05D008283 7.7e-31 139.8 119 57.1
FAN27G2805 Fragaria x ananassa HOM05D006530 ORTHO05D008283 7.7e-31 139.8 119 57.1
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 2.2e-30 138.3 118 56.8
SEGI_11846 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 4.0e-27 127.5 118 52.5
BcaB06g26964 Brassica carinata HOM05D006530 ORTHO05D008283 8.3e-17 93.2 81 54.3
SGA_v2.0_scaffold112G31585 Striga asiatica HOM05D006530 ORTHO05D008283 4.1e-16 90.9 93 51.6
SHI10239 Sapria himalayana HOM05D006530 ORTHO05D008283 2.0e-15 88.6 97 46.4
Cfa025683 Carpinus fangiana HOM05D006530 ORTHO05D008283 5.9e-15 87.0 355 25.9
Lj6g0015704 Lotus japonicus HOM05D003423 ORTHO05D003910 1.7e-06 58.9 256 26.6
SHI10236 Sapria himalayana HOM05D006530 ORTHO05D008283 2.3e-06 58.5 73 43.8
MBI19_g29441_MAGBIO Magnolia biondii HOM05D006530 ORTHO05D008283 3.9e-06 57.8 94 38.3


User provided reference genes

Program Settings