Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 7.7e-65 250.4 129 100.0
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 2.2e-35 152.5 176 52.3
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 3.1e-26 122.1 102 64.7
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 2.9e-24 115.5 135 50.4
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 1.5e-23 113.2 99 62.6
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 1.9e-23 112.8 110 58.2
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 4.3e-23 111.7 98 58.2
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 7.3e-23 110.9 109 60.6
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 9.5e-23 110.5 94 61.7
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 9.5e-23 110.5 119 52.9
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 1.2e-22 110.2 93 62.4
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 1.2e-22 110.2 89 62.9
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.6e-22 109.8 94 61.7
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 2.1e-22 109.4 109 59.6
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 2.1e-22 109.4 94 61.7
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 2.1e-22 109.4 95 61.1
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 6.1e-22 107.8 94 63.8
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 1.0e-21 107.1 104 60.6
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 2.3e-21 105.9 108 56.5
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 4.0e-21 105.1 92 58.7
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 5.2e-21 104.8 125 51.2
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 5.2e-21 104.8 119 47.1
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 5.2e-21 104.8 92 58.7
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 6.8e-21 104.4 101 55.4
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 6.8e-21 104.4 113 54.9
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 8.9e-21 104.0 120 52.5
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 2.0e-20 102.8 121 50.4
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 2.0e-20 102.8 119 49.6
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 2.6e-20 102.4 120 52.5
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 3.4e-20 102.1 90 58.9
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 3.4e-20 102.1 119 49.6
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 4.4e-20 101.7 127 47.2
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 4.4e-20 101.7 109 51.4
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 7.5e-20 100.9 99 53.5
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 7.5e-20 100.9 92 56.5
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 1.3e-19 100.1 96 59.4
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.2e-19 99.4 97 53.6
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 2.2e-19 99.4 76 65.8
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 2.2e-19 99.4 100 58.0
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 2.9e-19 99.0 93 55.9
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 3.7e-19 98.6 108 50.9
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 4.9e-19 98.2 106 50.0
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 6.4e-19 97.8 99 53.5
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 6.4e-19 97.8 90 54.4
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 6.4e-19 97.8 75 65.3
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 1.4e-18 96.7 97 52.6
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.4e-18 96.7 104 51.0
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 1.8e-18 96.3 123 45.5
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 2.4e-18 95.9 94 54.3
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 3.2e-18 95.5 120 45.0
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 4.1e-18 95.1 81 59.3
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 4.1e-18 95.1 99 52.5
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 5.4e-18 94.7 117 49.6
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 5.4e-18 94.7 69 65.2
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 5.4e-18 94.7 124 46.8
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 9.2e-18 94.0 93 51.6
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 9.2e-18 94.0 100 48.0
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 9.2e-18 94.0 104 51.0
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 1.2e-17 93.6 109 49.5
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 2.7e-17 92.4 87 57.5
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 2.7e-17 92.4 113 46.9
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 5.9e-17 91.3 123 44.7
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 5.9e-17 91.3 89 55.1
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 1.0e-16 90.5 105 48.6
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 1.3e-16 90.1 109 47.7
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 1.3e-16 90.1 87 56.3
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 1.7e-16 89.7 101 50.5
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 1.7e-16 89.7 99 49.5
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 3.0e-16 89.0 93 58.1
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 3.0e-16 89.0 110 45.5
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 3.9e-16 88.6 92 53.3
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 5.0e-16 88.2 93 51.6
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 6.6e-16 87.8 93 55.9
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 6.6e-16 87.8 87 55.2
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 6.6e-16 87.8 94 51.1
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 8.6e-16 87.4 125 43.2
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 8.6e-16 87.4 87 54.0
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 8.6e-16 87.4 133 42.9
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 1.5e-15 86.7 76 53.9
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 1.5e-15 86.7 87 48.3
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 4.3e-15 85.1 101 48.5
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 7.3e-15 84.3 101 47.5
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 7.3e-15 84.3 59 72.9
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 7.3e-15 84.3 99 44.4
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 1.2e-14 83.6 74 56.8
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 3.6e-14 82.0 67 64.2
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 1.1e-13 80.5 83 48.2
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 2.3e-13 79.3 114 43.0
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 2.3e-13 79.3 66 57.6
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 6.8e-13 77.8 75 49.3
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 8.9e-13 77.4 73 49.3
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 1.2e-12 77.0 79 51.9
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 1.2e-12 77.0 99 46.5
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 2.0e-12 76.3 79 51.9
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 3.4e-12 75.5 113 45.1
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 3.4e-12 75.5 69 49.3
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 4.4e-12 75.1 100 47.0
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 2.4e-10 69.3 131 37.4
ATR0763G267 Amborella trichopoda HOM05D007217 ORTHO05D009092 9.2e-10 67.4 90 45.6
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 2.7e-09 65.9 92 40.2
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 2.7e-09 65.9 127 37.0
C02p14430 Brassica napus HOM05D007217 ORTHO05D009092 3.5e-09 65.5 77 44.2
BolC2t07567H Brassica oleracea HOM05D007217 ORTHO05D009092 3.5e-09 65.5 77 44.2
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 3.5e-09 65.5 92 45.7
Zm00001eb228930 Zea mays HOM05D007217 ORTHO05D009092 7.8e-09 64.3 81 46.9
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 1.1e-07 60.5 111 35.1


User provided reference genes

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