Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 9.7e-62 240.0 121 100.0
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.8e-37 158.7 100 81.0
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-34 149.8 100 77.0
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-34 149.8 100 77.0
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-34 149.8 100 77.0
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 6.4e-29 131.0 89 74.2
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 6.4e-29 131.0 111 64.9
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 8.3e-29 130.6 97 70.1
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 1.4e-28 129.8 87 74.7
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 7.0e-28 127.5 89 74.2
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 7.0e-28 127.5 100 67.0
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 9.2e-28 127.1 86 73.3
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 1.2e-27 126.7 85 72.9
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 1.2e-27 126.7 87 70.1
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.0e-27 125.9 86 69.8
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 2.0e-27 125.9 87 74.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 2.7e-27 125.6 88 70.5
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 3.5e-27 125.2 89 68.5
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 4.6e-27 124.8 87 72.4
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 5.9e-27 124.4 129 56.6
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 5.9e-27 124.4 97 63.9
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 7.8e-27 124.0 99 68.7
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 7.8e-27 124.0 88 70.5
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 7.8e-27 124.0 87 73.6
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.3e-26 123.2 85 75.3
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.3e-26 123.2 93 65.6
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.3e-26 123.2 89 68.5
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.7e-26 122.9 85 70.6
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 2.3e-26 122.5 87 67.8
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 2.3e-26 122.5 99 67.7
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.3e-26 122.5 93 65.6
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 3.0e-26 122.1 86 73.3
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.6e-26 120.9 114 60.5
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 8.6e-26 120.6 84 73.8
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 8.6e-26 120.6 97 66.0
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 8.6e-26 120.6 84 71.4
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 8.6e-26 120.6 114 59.6
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 1.5e-25 119.8 97 66.0
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.5e-25 119.8 92 65.2
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.9e-25 119.4 86 70.9
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.9e-25 119.4 109 59.6
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 2.5e-25 119.0 97 64.9
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.3e-25 118.6 84 70.2
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.3e-25 118.6 83 72.3
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 3.3e-25 118.6 87 69.0
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 3.3e-25 118.6 86 67.4
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 3.3e-25 118.6 112 58.9
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 4.3e-25 118.2 87 70.1
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 5.6e-25 117.9 109 58.7
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 1.6e-24 116.3 87 70.1
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 1.6e-24 116.3 85 67.1
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 2.8e-24 115.5 88 68.2
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 4.7e-24 114.8 105 58.1
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.0e-23 113.6 130 48.5
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.0e-23 113.6 87 66.7
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 3.1e-23 112.1 83 68.7
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 3.1e-23 112.1 86 67.4
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 3.1e-23 112.1 83 68.7
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 5.2e-23 111.3 85 64.7
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 6.8e-23 110.9 86 66.3
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 8.9e-23 110.5 83 63.9
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 3.4e-22 108.6 88 65.9
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 9.8e-22 107.1 93 55.9
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.7e-21 106.3 86 65.1
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 2.2e-21 105.9 81 65.4
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 2.9e-21 105.5 81 61.7
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.9e-21 105.5 84 63.1
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 4.9e-21 104.8 85 63.5
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.4e-20 103.2 100 60.0
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.4e-20 103.2 94 59.6
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.2e-19 100.1 85 55.3
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 1.6e-19 99.8 85 55.3
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 2.0e-19 99.4 88 62.5
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 6.0e-19 97.8 85 54.1
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 6.0e-19 97.8 85 54.1
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 7.8e-19 97.4 85 55.3
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 7.8e-19 97.4 86 54.7
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 1.3e-18 96.7 85 54.1
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 3.9e-18 95.1 85 52.9
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 3.9e-18 95.1 85 52.9
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 5.0e-18 94.7 92 51.1
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 8.6e-18 94.0 85 52.9
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.5e-17 93.2 76 56.6
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 1.5e-17 93.2 98 48.0
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.9e-17 92.8 84 54.8
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 7.3e-17 90.9 101 50.5
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.6e-16 89.7 85 51.8
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 2.1e-16 89.4 83 49.4
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 2.8e-16 89.0 85 49.4
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 2.8e-16 89.0 89 52.8
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.8e-15 86.3 84 47.6
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 3.1e-15 85.5 83 51.8
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 4.0e-15 85.1 85 55.3
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 9.8e-14 80.5 84 46.4
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 2.2e-13 79.3 79 50.6
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 1.9e-12 76.3 72 52.8
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.5e-09 66.6 63 50.8
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 1.4e-07 60.1 43 62.8
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 1.4e-07 60.1 84 38.1
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 4.0e-07 58.5 48 66.7
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 1.2e-06 57.0 47 61.7
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 3.4e-06 55.5 30 80.0
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 5.8e-06 54.7 101 36.6


User provided reference genes

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