Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22637 Beta vulgaris HOM05D004072 ORTHO05D005933 0.0e+00 1418.3 703 100.0
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 0.0e+00 1381.3 728 95.1
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 0.0e+00 1186.0 739 79.8
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 0.0e+00 1174.8 761 77.7
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 0.0e+00 1169.5 742 79.0
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 0.0e+00 1120.5 739 74.3
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 7.6e-308 1060.1 742 69.9
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.1e-303 1046.2 729 69.8
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 4.3e-303 1044.3 741 68.8
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 7.3e-303 1043.5 742 68.5
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 9.6e-303 1043.1 742 68.9
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 2.8e-302 1041.6 744 68.5
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 3.6e-302 1041.2 740 68.9
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 8.1e-302 1040.0 729 69.1
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 9.0e-301 1036.6 742 68.9
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.2e-300 1036.2 729 69.0
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 2.6e-300 1035.0 742 68.6
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 3.4e-300 1034.6 742 68.9
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 2.9e-299 1031.6 740 68.6
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 3.8e-299 1031.2 742 68.1
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 4.9e-299 1030.8 742 68.6
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 6.4e-299 1030.4 742 68.2
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 2.4e-298 1028.5 742 68.6
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 5.4e-298 1027.3 729 68.9
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 7.1e-298 1026.9 742 67.4
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.2e-297 1026.2 742 68.2
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 6.0e-297 1023.8 742 68.1
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 6.0e-297 1023.8 741 68.2
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 1.0e-296 1023.1 741 67.9
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 1.0e-296 1023.1 742 67.7
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 1.8e-296 1022.3 742 67.8
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 3.9e-296 1021.1 742 67.9
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 3.1e-293 1011.5 742 67.0
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 3.1e-293 1011.5 743 67.0
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 5.3e-293 1010.7 740 67.0
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 1.2e-292 1009.6 743 66.9
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 5.8e-292 1007.3 742 66.6
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 1.0e-291 1006.5 740 66.4
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 1.3e-291 1006.1 742 66.3
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 1.3e-291 1006.1 743 67.2
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 3.8e-291 1004.6 742 66.3
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 1.1e-290 1003.0 741 65.9
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 3.2e-290 1001.5 741 66.3
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 2.1e-289 998.8 742 65.6
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 6.0e-289 997.3 742 65.1
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 7.9e-289 996.9 741 64.5
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 7.9e-289 996.9 742 66.3
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 1.0e-288 996.5 741 64.5
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 1.3e-288 996.1 742 66.0
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 2.3e-288 995.3 742 65.6
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 1.9e-287 992.3 742 65.4
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 1.9e-287 992.3 761 64.5
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 4.3e-287 991.1 742 65.2
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 8.2e-286 986.9 732 65.4
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 1.1e-285 986.5 742 65.2
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 4.0e-285 984.6 742 65.0
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 1.0e-283 979.9 741 64.2
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 2.9e-283 978.4 742 65.8
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 3.8e-283 978.0 742 65.9
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 5.0e-283 977.6 742 64.7
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 1.4e-282 976.1 710 66.2
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 5.5e-282 974.2 742 65.0
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 4.6e-281 971.1 742 64.6
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.3e-280 969.5 732 64.6
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 3.0e-280 968.4 744 64.0
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 4.3e-279 964.5 742 64.3
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 4.3e-279 964.5 740 64.9
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 5.7e-279 964.1 726 63.4
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 9.7e-279 963.4 742 63.9
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 2.2e-278 962.2 745 64.7
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 4.8e-278 961.1 741 64.1
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 8.2e-278 960.3 703 67.1
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 1.4e-277 959.5 742 63.6
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 1.4e-277 959.5 743 64.6
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 1.8e-277 959.1 742 64.0
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 4.1e-277 958.0 783 61.9
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 5.3e-277 957.6 742 63.9
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 9.0e-277 956.8 742 64.0
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 2.0e-276 955.7 684 69.4
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 4.5e-276 954.5 742 63.6
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 7.7e-276 953.7 742 63.6
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 8.5e-275 950.3 737 63.8
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 9.4e-274 946.8 742 63.9
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 3.6e-273 944.9 731 64.0
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 1.0e-272 943.3 772 61.4
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.2e-268 929.9 870 55.7
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 3.8e-267 924.9 742 63.1
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 1.6e-257 892.9 649 67.0
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 4.4e-255 884.8 738 61.9
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 5.3e-253 877.9 739 59.1
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 1.2e-247 860.1 753 57.4
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 2.0e-247 859.4 1163 42.9
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 7.5e-247 857.4 615 69.9
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 9.1e-245 850.5 742 56.2
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 3.6e-233 812.0 731 58.0
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 4.4e-231 805.1 679 59.4
TPR.G28617 Trifolium pratense HOM05D004072 ORTHO05D005933 2.0e-228 796.2 600 65.7
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 4.4e-223 778.5 742 53.8
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 2.9e-222 775.8 759 52.2
CDE02G3068 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 1.4e-221 773.5 632 59.7
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.9e-221 773.1 759 52.0
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 4.1e-221 771.9 741 52.4
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 5.4e-221 771.5 742 52.6
Potri.011G090150 Populus trichocarpa HOM05D004072 ORTHO05D005933 5.2e-216 755.0 550 68.7
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 2.6e-207 726.1 708 53.0
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 2.4e-176 623.2 742 49.2
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 6.9e-160 568.5 604 49.2
Cpa.g.sc17.88 Carica papaya HOM05D004072 ORTHO05D005933 5.9e-159 565.5 424 66.3
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 3.2e-149 533.1 472 54.9
Os07g0148800 Oryza sativa ssp. japonica HOM05D004072 ORTHO05D005933 3.8e-134 483.0 376 64.9
RcHm_v2.0_Chr1g0313161 Rosa chinensis HOM05D004072 ORTHO05D005933 8.5e-126 455.3 329 70.2
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 2.9e-113 413.7 411 50.4
CBR_g58028 Chara braunii HOM05D004072 ORTHO05D005933 8.6e-94 349.0 424 42.9
Medtr8g464200 Medicago truncatula HOM05D004072 ORTHO05D005933 7.1e-88 329.3 588 36.7
RcHm_v2.0_Chr5g0015771 Rosa chinensis HOM05D004072 ORTHO05D005933 1.2e-79 302.0 336 54.5
Cpa.g.sc17.87 Carica papaya HOM05D004072 ORTHO05D005933 6.4e-73 279.6 205 62.4
CSS0044654 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.1e-64 252.3 176 65.3
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 2.1e-63 248.1 259 46.7
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 4.6e-63 246.9 191 61.3
Ca_19908_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 1.8e-59 235.0 176 61.4
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 9.3e-56 222.6 157 64.3
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 7.6e-50 203.0 146 62.3
QL05p053334 Quercus lobata HOM05D004072 ORTHO05D005933 1.7e-41 175.3 98 85.7
PGSC0003DMG400021174 Solanum tuberosum HOM05D004072 ORTHO05D005933 2.9e-41 174.5 99 83.8
CBR_g34929 Chara braunii HOM05D004072 ORTHO05D005933 1.9e-40 171.8 202 42.6
CBR_g34931 Chara braunii HOM05D000019 ORTHO05D001702 3.6e-31 141.0 112 56.2
Atru.chr2.7 Acer truncatum HOM05D004072 ORTHO05D005933 1.8e-30 138.7 219 42.5
Lsat_1_v5_gn_1_88400 Lactuca sativa HOM05D004072 ORTHO05D005933 1.1e-29 136.0 128 50.0
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 7.4e-29 133.3 142 44.4
HanXRQChr09g0247891 Helianthus annuus HOM05D004072 ORTHO05D005933 2.9e-25 121.3 88 63.6
Cc09_g08270 Coffea canephora HOM05D004072 ORTHO05D005933 8.5e-25 119.8 73 79.5
MELO3C003358.2 Cucumis melo HOM05D004072 ORTHO05D005933 6.1e-23 113.6 135 47.4
Cc09_g08260 Coffea canephora HOM05D004072 ORTHO05D005933 7.5e-21 106.7 75 73.3
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 9.7e-21 106.3 256 30.1
vmacro01040 Vaccinium macrocarpon HOM05D000902 ORTHO05D000832 3.1e-19 101.3 192 37.5
Cpa.g.sc17.85 Carica papaya HOM05D004072 ORTHO05D005933 1.3e-17 95.9 251 26.3
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 6.5e-17 93.6 278 27.7
RcHm_v2.0_Chr1g0313151 Rosa chinensis HOM05D004072 ORTHO05D005933 8.5e-17 93.2 57 77.2
PGSC0003DMG400002279 Solanum tuberosum HOM05D004072 ORTHO05D005933 4.4e-13 80.9 50 78.0
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 3.7e-12 77.8 52 71.2
Lsat_1_v5_gn_6_30620 Lactuca sativa HOM05D000062 ORTHO05D013119 1.4e-11 75.9 139 35.3
Lsat_1_v5_gn_7_40200 Lactuca sativa HOM05D000062 ORTHO05D013119 3.8e-09 67.8 135 35.6
Lsat_1_v5_gn_6_117121 Lactuca sativa HOM05D004072 ORTHO05D001686 2.5e-08 65.1 38 73.7
Lj1A1163T37 Lonicera japonica HOM05D004072 ORTHO05D019491 5.5e-08 63.9 92 39.1
Actinidia04621 Actinidia chinensis HOM05D004072 ORTHO05D005933 7.2e-08 63.5 43 60.5
Lsat_1_v5_gn_9_121081 Lactuca sativa HOM05D004072 ORTHO05D001686 1.2e-07 62.8 35 77.1
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 8.8e-06 56.6 41 70.7
CSS0027246 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 8.8e-06 56.6 147 28.6


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