Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22588 Beta vulgaris HOM05D000176 ORTHO05D000106 1.5e-177 625.9 297 100.0
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 5.8e-124 448.0 383 63.2
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 1.4e-98 363.6 306 63.7
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 3.0e-96 355.9 287 66.6
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-94 348.2 278 64.7
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-94 348.2 278 64.7
EL10Ac5g11701 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-77 293.9 358 50.8
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 3.9e-64 249.2 165 72.1
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 4.9e-22 109.4 382 27.5
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 6.3e-22 109.0 382 27.5
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 8.3e-22 108.6 382 27.7
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.3e-19 101.3 248 31.0
EL10Ac9g20843 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-18 97.4 110 53.6
EL10Ac4g09261 Beta vulgaris HOM05D000176 ORTHO05D000106 5.6e-18 95.9 134 50.7
EL10Ac1g00589 Beta vulgaris HOM05D000176 ORTHO05D000106 7.3e-18 95.5 332 28.6
EL10Ac3g07230 Beta vulgaris HOM05D000176 ORTHO05D000106 7.3e-18 95.5 332 28.6
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 7.3e-18 95.5 283 28.6
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 7.3e-18 95.5 303 28.7
EL10Ac2g04591 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-17 94.7 332 28.6
EL10Ac6g14750 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-17 94.7 332 28.6
EL10Ac6g15299 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-17 94.7 332 28.6
EL10Ac5g11477 Beta vulgaris HOM05D000176 ORTHO05D000106 2.8e-17 93.6 332 28.3
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 8.0e-17 92.0 245 31.0
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-16 90.5 214 32.2
EL10Ac4g09361 Beta vulgaris HOM05D000176 ORTHO05D000106 3.1e-16 90.1 319 28.5
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-16 89.7 212 30.2
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 5.2e-16 89.4 253 30.4
EL10Ac2g02456 Beta vulgaris HOM05D000176 ORTHO05D000106 2.0e-15 87.4 334 27.8
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-15 87.4 268 30.2
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 3.4e-15 86.7 253 29.6
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-14 83.6 230 33.0
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-14 83.6 227 29.5
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-14 83.6 212 31.1
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-14 82.4 248 27.8
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 8.3e-14 82.0 284 27.1
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 8.3e-14 82.0 303 27.4
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 8.3e-14 82.0 249 26.5
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.1e-13 81.6 250 28.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-13 81.6 180 35.0
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-13 81.3 209 29.2
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-13 81.3 264 29.5
EL10Ac6g14325 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-13 80.9 249 29.7
EL10Ac9g20851 Beta vulgaris HOM05D000176 ORTHO05D012560 1.9e-13 80.9 263 27.8
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-13 80.9 248 27.4
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-13 79.7 250 28.4
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.4e-13 79.3 268 28.7
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 7.0e-13 79.0 243 29.2
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 9.2e-13 78.6 216 33.3
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.6e-12 77.8 269 27.9
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-12 77.8 210 28.6
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-12 77.4 272 27.9
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 2.7e-12 77.0 206 30.1
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.7e-12 77.0 265 28.7
EL10Ac5g11692 Beta vulgaris HOM05D000176 ORTHO05D000106 3.5e-12 76.6 257 28.8
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-12 76.3 211 29.9
EL10Ac2g04872 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-12 75.9 158 34.8
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 7.8e-12 75.5 269 28.3
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.8e-12 75.5 289 28.0
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.3e-11 73.9 265 28.3
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-11 73.2 273 28.2
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-11 72.8 236 28.4
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.6e-11 72.4 288 26.4
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 8.6e-11 72.0 217 28.1
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.9e-10 70.9 262 26.3
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.5e-10 70.5 264 26.9
EL10Ac4g08722 Beta vulgaris HOM05D000176 ORTHO05D012560 4.3e-10 69.7 155 34.8
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.3e-10 69.7 269 26.8
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-10 69.7 247 25.9
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 5.6e-10 69.3 187 27.8
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 7.3e-10 68.9 281 24.9
EL10Ac1g00132 Beta vulgaris HOM05D000176 ORTHO05D000106 9.5e-10 68.6 257 27.6
EL10Ac8g19525 Beta vulgaris HOM05D000176 ORTHO05D000106 9.5e-10 68.6 257 27.6
EL10Ac8g20250 Beta vulgaris HOM05D000176 ORTHO05D000106 9.5e-10 68.6 257 27.6
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-10 68.6 160 33.1
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 67.8 249 26.1
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 3.6e-09 66.6 191 27.7
EL10Ac4g09308 Beta vulgaris HOM05D000176 ORTHO05D000106 4.7e-09 66.2 148 35.8
MELO3C027673.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.2e-09 65.9 130 33.8
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-09 65.9 276 25.7
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-09 65.9 215 28.8
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-09 65.5 114 32.5
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-09 65.5 232 27.2
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.4e-08 64.7 182 30.2
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-08 64.3 203 28.1
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-08 64.3 226 26.5
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-08 64.3 122 39.3
EL10Ac5g11558 Beta vulgaris HOM05D000176 ORTHO05D012560 4.0e-08 63.2 207 28.5
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-08 63.2 136 32.4
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-08 62.8 227 26.4
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-08 62.8 122 32.0
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-08 62.8 141 32.6
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-08 62.4 312 23.4
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-08 62.4 222 28.4
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.8e-08 62.4 235 25.5
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 8.9e-08 62.0 204 28.9
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 8.9e-08 62.0 159 30.8
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.9e-08 62.0 149 34.2
Ca_02570_v3 Cicer arietinum L. HOM05D001569 ORTHO05D002183 1.5e-07 61.2 209 29.7
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.5e-07 61.2 248 25.8
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-07 61.2 124 33.1
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 2.6e-07 60.5 144 25.7
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-07 60.1 235 24.3
Ciclev10025397m.g Citrus clementina HOM05D000176 ORTHO05D000106 3.4e-07 60.1 208 27.4
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.4e-07 59.7 189 28.6
EL10Ac9g20755 Beta vulgaris HOM05D000176 ORTHO05D000106 5.8e-07 59.3 257 26.8
EL10Ac7g17693 Beta vulgaris HOM05D000176 ORTHO05D000106 9.8e-07 58.5 142 33.1
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.8e-07 58.5 294 25.2
Lj7A594T54 Lonicera japonica HOM05D000176 ORTHO05D000106 9.8e-07 58.5 113 37.2
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 9.8e-07 58.5 148 33.1
EL10Ac1g01877 Beta vulgaris HOM05D018751 ORTHO05D012560 1.3e-06 58.2 119 31.1
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.3e-06 58.2 241 27.4
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 58.2 216 26.9
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.3e-06 58.2 122 30.3
EL10Ac4g08453 Beta vulgaris HOM05D000176 ORTHO05D000106 1.7e-06 57.8 144 33.3
EL10Ac4g08454 Beta vulgaris HOM05D000176 ORTHO05D000106 1.7e-06 57.8 144 33.3
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-06 57.8 277 24.2
MELO3C027159.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.7e-06 57.8 215 27.4
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 1.7e-06 57.8 310 25.5
EL10Ac5g11730 Beta vulgaris HOM05D000176 ORTHO05D000106 2.9e-06 57.0 156 32.1
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 2.9e-06 57.0 111 27.9
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-06 56.6 170 32.4
Solyc08g016802.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.7e-06 56.6 128 34.4
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-06 56.2 104 32.7
CSS0038560 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.4e-06 55.8 140 30.0
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 8.3e-06 55.5 118 28.8
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 8.3e-06 55.5 155 28.4


User provided reference genes

Program Settings