Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22585 Beta vulgaris HOM05D000030 ORTHO05D007344 7.1e-113 410.6 206 100.0
EL10Ac8g19377 Beta vulgaris HOM05D000030 ORTHO05D000009 7.2e-49 198.0 228 50.0
EL10Ac2g03260 Beta vulgaris HOM05D000030 ORTHO05D000009 3.6e-48 195.7 216 51.4
SHI01642 Sapria himalayana HOM05D000030 ORTHO05D007344 5.2e-39 165.2 222 44.6
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-36 154.8 210 43.3
SHI06427 Sapria himalayana HOM05D000030 ORTHO05D000009 5.7e-30 135.2 178 46.6
EL10As2g23188 Beta vulgaris HOM05D000030 ORTHO05D000009 8.3e-29 131.3 73 86.3
EL10Ac5g11759 Beta vulgaris HOM05D000030 ORTHO05D000009 4.1e-28 129.0 73 84.9
COL.COLO4_10262 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.9e-25 120.2 210 38.1
Duzib268G1450 Durio zibethinus HOM05D000030 ORTHO05D000009 4.3e-25 119.0 143 46.2
Duzib168G0986 Durio zibethinus HOM05D000030 ORTHO05D000009 5.6e-25 118.6 194 38.7
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 7.3e-25 118.2 218 38.5
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.6e-24 117.1 218 38.1
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 1.6e-24 117.1 218 38.1
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 2.1e-24 116.7 222 37.4
AUR62015261 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.8e-23 113.6 92 59.8
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 2.3e-23 113.2 218 38.1
Duzib068G1361 Durio zibethinus HOM05D000030 ORTHO05D000009 4.0e-23 112.5 219 37.0
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.2e-22 110.9 230 35.7
EL10Ac5g11471 Beta vulgaris HOM05D000030 ORTHO05D000009 1.5e-22 110.5 190 40.5
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-22 110.5 174 40.8
Duzib068G0099 Durio zibethinus HOM05D000030 ORTHO05D000009 4.4e-22 109.0 191 38.7
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 8.3e-21 104.8 215 37.2
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.1e-20 104.4 218 35.3
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.4e-20 103.2 206 34.5
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 1.6e-19 100.5 224 34.4
COL.COLO4_35574 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.0e-18 97.8 208 35.6
Duzib187G1152 Durio zibethinus HOM05D000030 ORTHO05D000009 2.3e-18 96.7 73 60.3
Cc11_g13060 Coffea canephora HOM05D000030 ORTHO05D000009 5.0e-18 95.5 203 35.0
EL10Ac8g19947 Beta vulgaris HOM05D000030 ORTHO05D000031 2.5e-17 93.2 54 85.2
Duzib264G0918 Durio zibethinus HOM05D000030 ORTHO05D007344 3.3e-17 92.8 191 35.1
EL10Ac8g19439 Beta vulgaris HOM05D000030 ORTHO05D007344 2.1e-16 90.1 165 36.4
ECA238G4412 Erigeron canadensis HOM05D000030 ORTHO05D000009 4.7e-16 89.0 209 32.5
SHI18041 Sapria himalayana HOM05D000030 ORTHO05D000009 8.0e-16 88.2 206 32.5
TWI73G0883 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 5.2e-15 85.5 168 32.7
ECA238G0867 Erigeron canadensis HOM05D000030 ORTHO05D000009 6.8e-15 85.1 176 34.1
Psat4g138840 Pisum sativum HOM05D000030 ORTHO05D007344 8.9e-15 84.7 187 33.2
Psat6g215600 Pisum sativum HOM05D000030 ORTHO05D000009 8.9e-15 84.7 186 32.8
ECA248G2624 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.2e-14 84.3 209 31.1
TWI81G1001 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.2e-14 84.3 168 32.7
MSTRG.4308 Avicennia marina HOM05D000030 ORTHO05D000009 9.8e-14 81.3 101 43.6
EL10Ac4g08561 Beta vulgaris HOM05D000030 ORTHO05D000009 1.3e-13 80.9 50 78.0
TWI79G0114 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.3e-13 80.9 153 34.6
SGA_v2.0_scaffold23G10207 Striga asiatica HOM05D024920 ORTHO05D023790 8.3e-13 78.2 173 34.7
TWI77G0682 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.9e-12 77.0 142 34.5
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-11 73.9 227 30.0
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 2.0e-11 73.6 227 30.0
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.5e-11 72.8 190 33.7
SHI00319 Sapria himalayana HOM05D000030 ORTHO05D007344 1.7e-10 70.5 153 30.7
Nn5g27274 Nelumbo nucifera HOM05D000030 ORTHO05D007344 2.3e-10 70.1 65 49.2
SHI16798 Sapria himalayana HOM05D000030 ORTHO05D000009 2.3e-10 70.1 146 32.9
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 3.0e-10 69.7 216 30.6
Nn1g08489 Nelumbo nucifera HOM05D000030 ORTHO05D000009 3.9e-10 69.3 65 47.7
SHI06335 Sapria himalayana HOM05D000030 ORTHO05D000009 3.9e-10 69.3 50 60.0
EL10Ac8g20319 Beta vulgaris HOM05D000030 ORTHO05D000009 5.0e-10 68.9 73 53.4
Ah.02g114490 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.6e-10 68.6 183 29.5
TWI56G0896 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 6.6e-10 68.6 165 31.5
QL93p1872_0051 Quercus lobata HOM05D000030 ORTHO05D000009 8.6e-10 68.2 207 28.5
Lj6g0002297 Lotus japonicus HOM05D000030 ORTHO05D000009 1.1e-09 67.8 178 33.1
CiPaw.12G065500 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.5e-09 67.4 214 29.0
Duzib235G0836 Durio zibethinus HOM05D000030 ORTHO05D000009 1.5e-09 67.4 43 62.8
SHI15418 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-09 67.4 136 33.1
SHI16790 Sapria himalayana HOM05D000030 ORTHO05D007344 1.5e-09 67.4 146 32.2
EL10Ac8g20320 Beta vulgaris HOM05D019187 ORTHO05D007344 1.9e-09 67.0 60 46.7
AUR62043822 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-09 67.0 134 33.6
PSO384G4517 Papaver somniferum HOM05D000030 ORTHO05D013719 1.9e-09 67.0 145 31.7
Atru.chr2.1547 Acer truncatum HOM05D000030 ORTHO05D000009 2.5e-09 66.6 144 33.3
Nn7g37772 Nelumbo nucifera HOM05D000030 ORTHO05D007344 2.5e-09 66.6 65 47.7
AUR62038393 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.3e-09 65.1 133 33.1
PSO063G4958 Papaver somniferum HOM05D000030 ORTHO05D000009 7.3e-09 65.1 217 29.0
Ah.13g065590 Amaranthus hybridus HOM05D000030 ORTHO05D000009 9.5e-09 64.7 188 29.8
Atru.chr5.1563 Acer truncatum HOM05D000030 ORTHO05D000009 1.6e-08 63.9 163 30.1
Ah.13g065680 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.1e-08 63.5 188 29.3
SHI23085 Sapria himalayana HOM05D000030 ORTHO05D007344 2.8e-08 63.2 145 29.7
AUR62006169 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-08 62.8 134 32.8
COL.COLO4_20093 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.6e-08 62.8 168 28.0
Hma1.2p1_0608F.1_g188290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.6e-08 62.8 130 33.1
SHI46971 Sapria himalayana HOM05D000030 ORTHO05D007344 3.6e-08 62.8 148 29.1
COL.COLO4_19731 Corchorus olitorius HOM05D000030 ORTHO05D000009 4.7e-08 62.4 173 32.9
Gohir.A02G007050 Gossypium hirsutum HOM05D000030 ORTHO05D000009 6.2e-08 62.0 161 27.3
Gohir.D02G006650 Gossypium hirsutum HOM05D000030 ORTHO05D000009 6.2e-08 62.0 161 27.3
Hund12077 Selenicereus undatus HOM05D000030 ORTHO05D000009 6.2e-08 62.0 178 28.7
Gorai.005G007800 Gossypium raimondii HOM05D000030 ORTHO05D000009 8.1e-08 61.6 161 27.3
CiPaw.03G205900 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.4e-07 60.8 145 31.0
COL.COLO4_37070 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.4e-07 60.8 161 28.0
Duzib151G0841 Durio zibethinus HOM05D000030 ORTHO05D000009 1.4e-07 60.8 161 26.1
FvH4_1g28482 Fragaria vesca HOM05D000030 ORTHO05D000009 1.4e-07 60.8 156 32.1
FvH4_3g33584 Fragaria vesca HOM05D000030 ORTHO05D000009 1.4e-07 60.8 153 32.0
Os01g0698300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 1.4e-07 60.8 188 26.1
SHI03791 Sapria himalayana HOM05D000030 ORTHO05D007344 1.4e-07 60.8 146 29.5
Oeu056385.1 Olea europaea HOM05D000030 ORTHO05D000009 1.8e-07 60.5 143 30.8
SHI45501 Sapria himalayana HOM05D000030 ORTHO05D007344 1.8e-07 60.5 127 30.7
Hund25215 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.8e-07 60.5 178 28.7
TWI60G0371 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.8e-07 60.5 218 27.5
Oeu057693.1 Olea europaea HOM05D000030 ORTHO05D000009 2.3e-07 60.1 164 28.7
PSO478G3458 Papaver somniferum HOM05D000030 ORTHO05D000009 2.3e-07 60.1 139 30.9
RcHm_v2.0_Chr2g0138901 Rosa chinensis HOM05D000030 ORTHO05D000009 2.3e-07 60.1 158 30.4
CiPaw.14G091800 Carya illinoinensis HOM05D000030 ORTHO05D000009 3.1e-07 59.7 177 27.7
MBI16_g11019_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 3.1e-07 59.7 139 31.7
SGA_v2.0_scaffold34G13773 Striga asiatica HOM05D000030 ORTHO05D000009 3.1e-07 59.7 210 27.6
AUR62023658 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.0e-07 59.3 139 30.2
Oeu000293.1 Olea europaea HOM05D000030 ORTHO05D000009 4.0e-07 59.3 143 30.1
Oeu036151.1 Olea europaea HOM05D000030 ORTHO05D000009 4.0e-07 59.3 165 29.1
Rhsim02G0160600 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.0e-07 59.3 138 32.6
Rhsim08G0115000 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.0e-07 59.3 138 32.6
Hund12550 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.0e-07 59.3 178 28.7
AUR62041921 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.2e-07 58.9 122 32.8
TPR.G22336 Trifolium pratense HOM05D000030 ORTHO05D000009 5.2e-07 58.9 103 36.9
Ah.15g100040 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.8e-07 58.5 167 24.6
AUR62039582 Chenopodium quinoa HOM05D066824 ORTHO05D007344 6.8e-07 58.5 137 32.8
Oeu018261.1 Olea europaea HOM05D000030 ORTHO05D000009 6.8e-07 58.5 147 28.6
Hund19887 Selenicereus undatus HOM05D000030 ORTHO05D000009 6.8e-07 58.5 164 29.3
Hma1.2p1_0982F.1_g243880 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.9e-07 58.2 145 29.7
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 8.9e-07 58.2 148 29.7
CSS0005417 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-06 57.8 162 27.8
CSS0008208 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-06 57.8 162 27.8
CSS0013193 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-06 57.8 162 27.8
AUR62044584 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.8 139 30.2
PSO478G0147 Papaver somniferum HOM05D000030 ORTHO05D000009 1.2e-06 57.8 177 28.8
Hund21780 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.2e-06 57.8 178 27.5
Hund31090 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.2e-06 57.8 178 27.5
CSS0020749 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 57.4 162 27.8
CSS0030850 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 57.4 162 27.8
CSS0034406 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 57.4 162 27.8
CSS0036583 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 57.4 162 27.8
CSS0040089 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 57.4 162 27.8
CSS0045392 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 57.4 162 27.8
CSS0047846 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 57.4 162 27.8
CANSAT25G2753 Cannabis sativa HOM05D000030 ORTHO05D000009 1.5e-06 57.4 180 28.9
Duzib205G1162 Durio zibethinus HOM05D000030 ORTHO05D000009 1.5e-06 57.4 41 63.4
MBI17_g24529_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 1.5e-06 57.4 152 29.6
PSO675G2294 Papaver somniferum HOM05D000030 ORTHO05D000009 1.5e-06 57.4 179 27.9
QL12p011615 Quercus lobata HOM05D000030 ORTHO05D000009 1.5e-06 57.4 174 27.6
SHI00423 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-06 57.4 204 28.4
Atru.chr1.2186 Acer truncatum HOM05D000030 ORTHO05D000009 2.0e-06 57.0 125 31.2
Atru.chr13.1352 Acer truncatum HOM05D000030 ORTHO05D000009 2.0e-06 57.0 131 32.8
Ah.08g218550 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.0e-06 57.0 197 25.9
CSS0048834 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.0e-06 57.0 162 27.8
PSO067G0052 Papaver somniferum HOM05D000030 ORTHO05D000009 2.0e-06 57.0 177 28.8
Rhsim07G0157200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-06 57.0 136 31.6
SHI07178 Sapria himalayana HOM05D000105 ORTHO05D000009 2.0e-06 57.0 172 30.2
SHI12385 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-06 57.0 172 30.2
SHI39414 Sapria himalayana HOM05D000030 ORTHO05D007344 2.0e-06 57.0 71 39.4
SHI42305 Sapria himalayana HOM05D000030 ORTHO05D007344 2.0e-06 57.0 71 39.4
Hund22431 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.0e-06 57.0 178 28.1
Ah.02g123320 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.6e-06 56.6 186 26.9
Ah.11g040900 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.6e-06 56.6 168 24.4
PSO135G0777 Papaver somniferum HOM05D000030 ORTHO05D000009 2.6e-06 56.6 177 28.8
RcHm_v2.0_Chr3g0493121 Rosa chinensis HOM05D000030 ORTHO05D000023 2.6e-06 56.6 220 28.2
SHI38150 Sapria himalayana HOM05D000030 ORTHO05D000009 2.6e-06 56.6 172 30.2
Hund15614 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.6e-06 56.6 164 28.0
Hund29994 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.6e-06 56.6 178 27.0
Hund30778 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.6e-06 56.6 178 27.0
SGA_v2.0_scaffold8G04240 Striga asiatica HOM05D000030 ORTHO05D000009 2.6e-06 56.6 208 26.0
Aqoxy3G01656 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 3.4e-06 56.2 127 30.7
CSS0027790 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.4e-06 56.2 165 27.3
AUR62037889 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 56.2 139 29.5
SHI20466 Sapria himalayana HOM05D000030 ORTHO05D000009 3.4e-06 56.2 172 30.2
Thecc.04G159700 Theobroma cacao HOM05D000030 ORTHO05D000009 3.4e-06 56.2 161 26.1
CSS0048268 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.4e-06 55.8 162 27.2
AUR62027940 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.4e-06 55.8 139 29.5
Dinv10810 Davidia involucrata HOM05D000030 ORTHO05D000009 4.4e-06 55.8 142 29.6
MBI18_g15001_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 4.4e-06 55.8 152 27.6
Nn5g27667 Nelumbo nucifera HOM05D000030 ORTHO05D000009 4.4e-06 55.8 166 27.1
SHI29029 Sapria himalayana HOM05D000030 ORTHO05D000009 4.4e-06 55.8 64 42.2
SHI37740 Sapria himalayana HOM05D000030 ORTHO05D007344 4.4e-06 55.8 98 35.7
SHI54494 Sapria himalayana HOM05D000030 ORTHO05D007344 4.4e-06 55.8 70 40.0
Hund17417 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.4e-06 55.8 178 28.7
CSS0001939 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.8e-06 55.5 165 27.3
AUR62027935 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.8e-06 55.5 171 25.7
PSO541G2409 Papaver somniferum HOM05D000030 ORTHO05D000009 5.8e-06 55.5 168 26.8
SHI54847 Sapria himalayana HOM05D000030 ORTHO05D007344 5.8e-06 55.5 71 38.0
Hund24110 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.8e-06 55.5 178 26.4
Sopen08g019750 Solanum pennellii HOM05D000030 ORTHO05D000009 5.8e-06 55.5 124 27.4
CANSAT01G1043 Cannabis sativa HOM05D000030 ORTHO05D000009 7.5e-06 55.1 168 28.6
Hma1.2p1_1093F.1_g256040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.5e-06 55.1 153 30.7
CANSAT64G2844 Cannabis sativa HOM05D000030 ORTHO05D000023 9.9e-06 54.7 180 27.8
PSO478G1203 Papaver somniferum HOM05D000030 ORTHO05D000009 9.9e-06 54.7 179 27.9
PSO675G2696 Papaver somniferum HOM05D000030 ORTHO05D000009 9.9e-06 54.7 168 26.8
SHI39170 Sapria himalayana HOM05D000030 ORTHO05D007344 9.9e-06 54.7 70 38.6
SHI44739 Sapria himalayana HOM05D000030 ORTHO05D007344 9.9e-06 54.7 78 35.9
Hund01835 Selenicereus undatus HOM05D000030 ORTHO05D000009 9.9e-06 54.7 178 25.8


User provided reference genes

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