Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 2.9e-56 221.5 98 100.0
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 9.4e-31 136.7 69 82.6
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.6e-30 134.8 69 81.2
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 2.3e-29 132.1 71 78.9
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 8.8e-29 130.2 72 73.6
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 4.4e-28 127.9 72 69.4
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 4.4e-28 127.9 70 74.3
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 7.4e-28 127.1 70 72.9
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 9.7e-28 126.7 72 72.2
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 9.7e-28 126.7 72 69.4
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 1.7e-27 125.9 75 65.3
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 1.7e-27 125.9 72 69.4
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 2.2e-27 125.6 72 68.1
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 2.8e-27 125.2 72 66.7
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 2.8e-27 125.2 75 64.0
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 2.8e-27 125.2 72 72.2
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 3.7e-27 124.8 70 71.4
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 4.8e-27 124.4 72 68.1
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 4.8e-27 124.4 72 66.7
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 1.1e-26 123.2 76 67.1
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.4e-26 122.9 76 65.8
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.4e-26 122.9 68 70.6
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 1.8e-26 122.5 72 68.1
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.8e-26 122.5 72 66.7
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 3.1e-26 121.7 72 68.1
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 3.1e-26 121.7 72 65.3
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 3.1e-26 121.7 68 70.6
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 4.1e-26 121.3 72 68.1
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 4.1e-26 121.3 72 69.4
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.3e-26 120.9 72 65.3
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.3e-26 120.9 72 65.3
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 5.3e-26 120.9 72 65.3
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 7.0e-26 120.6 71 66.2
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 7.0e-26 120.6 71 66.2
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 9.1e-26 120.2 71 66.2
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 9.1e-26 120.2 70 67.1
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 9.1e-26 120.2 69 68.1
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.5e-25 119.4 72 65.3
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.5e-25 119.4 72 65.3
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 2.0e-25 119.0 72 66.7
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 2.0e-25 119.0 69 69.6
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 2.0e-25 119.0 72 63.9
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 2.0e-25 119.0 72 65.3
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.6e-25 118.6 71 64.8
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.6e-25 118.6 70 65.7
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 3.5e-25 118.2 70 67.1
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.5e-25 117.9 70 68.6
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 4.5e-25 117.9 72 62.5
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 4.5e-25 117.9 72 62.5
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 5.9e-25 117.5 71 64.8
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 5.9e-25 117.5 70 64.3
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 7.7e-25 117.1 69 65.2
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 7.7e-25 117.1 72 63.9
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 1.0e-24 116.7 72 65.3
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.7e-24 115.9 71 63.4
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.7e-24 115.9 69 66.7
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 2.2e-24 115.5 72 63.9
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 2.9e-24 115.2 70 64.3
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 3.8e-24 114.8 72 61.1
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 5.0e-24 114.4 72 65.3
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 6.5e-24 114.0 72 62.5
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 6.5e-24 114.0 72 61.1
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 8.5e-24 113.6 72 61.1
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 8.5e-24 113.6 72 66.7
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 8.5e-24 113.6 70 67.1
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.1e-23 113.2 72 62.5
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 1.5e-23 112.8 70 62.9
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.9e-23 112.5 72 61.1
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.9e-23 112.5 72 61.1
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 1.9e-23 112.5 73 61.6
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 2.5e-23 112.1 72 58.3
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 2.5e-23 112.1 72 59.7
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 3.2e-23 111.7 72 56.9
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 3.2e-23 111.7 72 61.1
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 3.2e-23 111.7 70 61.4
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 4.2e-23 111.3 70 62.9
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 5.5e-23 110.9 72 59.7
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 5.5e-23 110.9 70 64.3
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 1.2e-22 109.8 72 59.7
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.6e-22 109.4 71 66.2
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 2.1e-22 109.0 72 61.1
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 2.7e-22 108.6 72 59.7
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 2.7e-22 108.6 72 56.9
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 6.1e-22 107.5 69 58.0
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 8.0e-22 107.1 72 58.3
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 8.0e-22 107.1 70 58.6
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 5.2e-21 104.4 72 55.6
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 8.8e-21 103.6 68 58.8
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 1.1e-20 103.2 70 54.3
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 1.1e-20 103.2 70 54.3
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 1.1e-20 103.2 70 54.3
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 1.1e-20 103.2 70 54.3
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 1.1e-20 103.2 70 54.3
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 1.1e-20 103.2 70 54.3
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 1.1e-20 103.2 72 56.9
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 1.1e-20 103.2 70 52.9
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 1.5e-20 102.8 72 55.6
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.5e-20 102.8 71 59.2
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 4.4e-20 101.3 71 57.7
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 5.7e-20 100.9 70 54.3
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 5.7e-20 100.9 69 58.0
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 5.7e-20 100.9 72 54.2
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 2.8e-19 98.6 72 56.9
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 6.3e-19 97.4 71 54.9
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.8e-18 95.9 72 52.8
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 3.5e-17 91.7 71 53.5
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.0e-16 90.1 70 52.9
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 2.9e-16 88.6 71 49.3
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 2.5e-15 85.5 44 72.7
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 9.4e-15 83.6 47 68.1
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 2.1e-14 82.4 73 45.2
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 4.7e-14 81.3 70 50.0
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 8.0e-14 80.5 80 42.5
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.4e-13 79.7 74 47.3


User provided reference genes

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