Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22544 Beta vulgaris HOM05D007206 ORTHO05D009176 3.3e-83 311.6 150 100.0
AUR62043339 Chenopodium quinoa HOM05D007206 ORTHO05D009176 1.7e-47 193.0 161 60.2
Hund01087 Selenicereus undatus HOM05D007206 ORTHO05D009176 6.4e-47 191.0 171 55.6
Sc02g0001330 Simmondsia chinensis HOM05D007206 ORTHO05D009176 5.6e-43 177.9 159 54.1
AUR62022783 Chenopodium quinoa HOM05D007206 ORTHO05D009176 9.0e-41 170.6 161 53.4
Prupe.7G122800 Prunus persica HOM05D007206 ORTHO05D009176 4.2e-38 161.8 163 47.2
RcHm_v2.0_Chr3g0471351 Rosa chinensis HOM05D007206 ORTHO05D009176 4.2e-38 161.8 167 46.7
Sopen01g017760 Solanum pennellii HOM05D007206 ORTHO05D009176 4.2e-38 161.8 156 51.9
Hma1.2p1_0564F.1_g179170 Hydrangea macrophylla HOM05D007206 ORTHO05D009176 9.3e-38 160.6 158 49.4
Solyc09g008590.4 Solanum lycopersicum HOM05D007206 ORTHO05D009176 1.2e-37 160.2 156 51.3
Migut.J00478 Erythranthe guttata HOM05D007206 ORTHO05D009176 2.1e-37 159.5 158 50.6
Actinidia32469 Actinidia chinensis HOM05D007206 ORTHO05D009176 2.7e-37 159.1 153 49.0
Peaxi162Scf01195g00005 Petunia axillaris HOM05D007206 ORTHO05D009176 4.6e-37 158.3 142 54.9
SGA_v2.0_scaffold657G53380 Striga asiatica HOM05D007206 ORTHO05D009176 4.6e-37 158.3 133 56.4
PGSC0003DMG400012983 Solanum tuberosum HOM05D007206 ORTHO05D009176 1.0e-36 157.1 156 50.6
CAN.G1759.3 Capsicum annuum HOM05D007206 ORTHO05D009176 1.8e-36 156.4 133 57.9
Cc06_g04800 Coffea canephora HOM05D007206 ORTHO05D009176 2.3e-36 156.0 162 45.7
Haze_19480 Corylus avellana HOM05D007206 ORTHO05D009176 2.3e-36 156.0 158 50.0
FAN05G5006 Fragaria x ananassa HOM05D007206 ORTHO05D009176 3.0e-36 155.6 163 47.9
Ca_08938_v3 Cicer arietinum L. HOM05D007206 ORTHO05D009176 5.1e-36 154.8 164 48.8
Ca_30111_v3 Cicer arietinum L. HOM05D007206 ORTHO05D009176 5.1e-36 154.8 164 48.8
FAN05G2314 Fragaria x ananassa HOM05D007206 ORTHO05D009176 8.7e-36 154.1 163 47.2
QL07p041366 Quercus lobata HOM05D007206 ORTHO05D009176 8.7e-36 154.1 164 47.6
FvH4_6g17250 Fragaria vesca HOM05D007206 ORTHO05D009176 1.1e-35 153.7 163 48.5
ClCG10G019630 Citrullus lanatus HOM05D007206 ORTHO05D009176 1.5e-35 153.3 157 48.4
FAN14G2195 Fragaria x ananassa HOM05D007206 ORTHO05D009176 3.3e-35 152.1 163 47.9
Oeu017000.1 Olea europaea HOM05D007206 ORTHO05D009176 4.3e-35 151.8 142 53.5
Lj1g0012469 Lotus japonicus HOM05D007206 ORTHO05D009176 5.6e-35 151.4 163 46.0
Sed0016601 Sechium edule HOM05D007206 ORTHO05D009176 5.6e-35 151.4 140 49.3
Eucgr.K02418 Eucalyptus grandis HOM05D007206 ORTHO05D009176 1.3e-34 150.2 137 51.8
Glyma.19G188400 Glycine max HOM05D007206 ORTHO05D009176 1.3e-34 150.2 163 47.2
VMungo1383G0088 Vigna mungo HOM05D007206 ORTHO05D009176 1.3e-34 150.2 158 48.7
Lalb_Chr25g0288781 Lupinus albus HOM05D007206 ORTHO05D009176 1.6e-34 149.8 157 47.8
CSS0049694 Camellia sinensis var. sinensis HOM05D007206 ORTHO05D009176 2.1e-34 149.4 149 53.7
Glyma.03G188300 Glycine max HOM05D007206 ORTHO05D009176 2.1e-34 149.4 153 47.1
SalBow3G1834 Salvia bowleyana HOM05D007206 ORTHO05D009176 2.1e-34 149.4 139 51.1
CiPaw.09G005300 Carya illinoinensis HOM05D007206 ORTHO05D009176 4.8e-34 148.3 166 45.8
Lsat_1_v5_gn_6_28201 Lactuca sativa HOM05D007206 ORTHO05D009176 4.8e-34 148.3 160 48.1
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 6.2e-34 147.9 150 50.0
Manes.09G048990 Manihot esculenta HOM05D007206 ORTHO05D009176 6.2e-34 147.9 167 44.9
Aqoxy1G01032 Aquilegia oxysepala HOM05D007206 ORTHO05D009176 8.1e-34 147.5 160 46.2
MELO3C009409.2 Cucumis melo HOM05D007206 ORTHO05D009176 2.4e-33 146.0 133 51.1
CsaV3_3G036450 Cucumis sativus L. HOM05D007206 ORTHO05D009176 2.4e-33 146.0 133 51.1
HanXRQChr13g0400551 Helianthus annuus HOM05D007206 ORTHO05D009176 2.4e-33 146.0 133 50.4
Sabra06G0093700 Salix brachista HOM05D007206 ORTHO05D009176 2.4e-33 146.0 159 45.9
ECA233G5177 Erigeron canadensis HOM05D007206 ORTHO05D009176 4.0e-33 145.2 133 51.9
PSO063G5977 Papaver somniferum HOM05D007206 ORTHO05D009176 5.3e-33 144.8 166 44.6
Potri.006G119100 Populus trichocarpa HOM05D007206 ORTHO05D009176 5.3e-33 144.8 162 45.7
TPR.G31671 Trifolium pratense HOM05D007206 ORTHO05D009176 1.2e-32 143.7 164 45.7
Duzib093G2029 Durio zibethinus HOM05D007206 ORTHO05D009176 1.5e-32 143.3 157 45.9
Medtr7g102770 Medicago truncatula HOM05D007206 ORTHO05D009176 2.0e-32 142.9 168 46.4
Phvul.001G183600 Phaseolus vulgaris HOM05D007206 ORTHO05D009176 9.9e-32 140.6 158 46.2
Thecc.05G075700 Theobroma cacao HOM05D007206 ORTHO05D009176 2.2e-31 139.4 159 41.5
Lj2C124T14 Lonicera japonica HOM05D007206 ORTHO05D009176 3.8e-31 138.7 145 48.3
MD14G1096900 Malus domestica HOM05D007206 ORTHO05D009176 4.9e-31 138.3 166 41.0
DCAR_017648 Daucus carota HOM05D007206 ORTHO05D009176 6.4e-31 137.9 166 43.4
MBI18_g24930_MAGBIO Magnolia biondii HOM05D007206 ORTHO05D009176 6.4e-31 137.9 143 45.5
THA.LOC104826925 Tarenaya hassleriana HOM05D007206 ORTHO05D009176 1.4e-30 136.7 167 43.7
MD12G1102700 Malus domestica HOM05D007206 ORTHO05D009176 4.2e-30 135.2 174 40.2
C03p43430 Brassica napus HOM05D007206 ORTHO05D009176 7.1e-30 134.4 138 46.4
TWI77G0103 Tripterygium wilfordii HOM05D007206 ORTHO05D009176 7.1e-30 134.4 157 42.7
BcaC01g04253 Brassica carinata HOM05D007206 ORTHO05D009176 9.3e-30 134.0 138 46.4
BolC3t16614H Brassica oleracea HOM05D007206 ORTHO05D009176 9.3e-30 134.0 138 46.4
HPP92_008498 Vanilla planifolia HOM05D007206 ORTHO05D009176 9.3e-30 134.0 148 45.3
ATR0580G453 Amborella trichopoda HOM05D007206 ORTHO05D009176 1.2e-29 133.7 141 47.5
Psat0s4599g0080 Pisum sativum HOM05D007206 ORTHO05D009176 1.6e-29 133.3 165 44.2
AT3G09925 Arabidopsis thaliana HOM05D007206 ORTHO05D009176 2.7e-29 132.5 155 45.2
BraA03t12750Z Brassica rapa HOM05D007206 ORTHO05D009176 3.5e-29 132.1 138 45.7
COL.COLO4_22256 Corchorus olitorius HOM05D007206 ORTHO05D009176 4.6e-29 131.7 165 43.0
AL3G21200 Arabidopsis lyrata HOM05D007206 ORTHO05D009176 1.0e-28 130.6 155 43.9
Sp3g08280 Schrenkiella parvula HOM05D007206 ORTHO05D009176 1.3e-28 130.2 138 44.2
Ciclev10006960m.g Citrus clementina HOM05D007206 ORTHO05D009176 3.0e-28 129.0 163 44.8
CARHR084450 Cardamine hirsuta HOM05D007206 ORTHO05D009176 3.9e-28 128.6 138 46.4
Cpa.g.sc5.124 Carica papaya HOM05D007206 ORTHO05D009176 3.9e-28 128.6 157 40.8
A03p35770 Brassica napus HOM05D007206 ORTHO05D009176 5.1e-28 128.3 139 44.6
Atru.chr8.1702 Acer truncatum HOM05D007206 ORTHO05D009176 8.7e-28 127.5 164 42.7
BcaB03g11581 Brassica carinata HOM05D007206 ORTHO05D009176 8.7e-28 127.5 130 46.9
Carub.0003s0903 Capsella rubella HOM05D007206 ORTHO05D009176 2.5e-27 125.9 155 41.9
Aa31LG3G2410 Aethionema arabicum HOM05D007206 ORTHO05D009176 5.6e-27 124.8 136 44.1
Gohir.D01G129600 Gossypium hirsutum HOM05D007206 ORTHO05D009176 9.6e-27 124.0 154 40.3
Sed0006266 Sechium edule HOM05D007206 ORTHO05D009176 1.3e-26 123.6 151 41.1
C05p58110 Brassica napus HOM05D007206 ORTHO05D009176 2.8e-26 122.5 155 41.9
BolC5t34468H Brassica oleracea HOM05D007206 ORTHO05D009176 2.8e-26 122.5 155 41.9
Thhalv10021649m.g Eutrema salsugineum HOM05D007206 ORTHO05D009176 3.7e-26 122.1 139 41.7
A05p39080 Brassica napus HOM05D007206 ORTHO05D009176 4.8e-26 121.7 155 41.3
BraA05t22700Z Brassica rapa HOM05D007206 ORTHO05D009176 4.8e-26 121.7 155 41.3
Gorai.002G160400 Gossypium raimondii HOM05D007206 ORTHO05D009176 6.2e-26 121.3 154 39.6
Dinv35836 Davidia involucrata HOM05D007206 ORTHO05D009176 1.2e-21 107.1 87 55.2
CANSAT80G1624 Cannabis sativa HOM05D007206 ORTHO05D009176 2.1e-21 106.3 138 40.6
arahy.Tifrunner.gnm1.ann1.06CJ1U Arachis hypogaea HOM05D007206 ORTHO05D009176 3.0e-20 102.4 90 53.3
PSO339G4243 Papaver somniferum HOM05D007206 ORTHO05D009176 1.1e-19 100.5 160 36.9
arahy.Tifrunner.gnm1.ann1.A01TPE Arachis hypogaea HOM05D007206 ORTHO05D009176 3.3e-19 99.0 90 51.1
PSO063G3127 Papaver somniferum HOM05D007206 ORTHO05D009176 3.3e-19 99.0 160 36.9
DCAR_017650 Daucus carota HOM05D007206 ORTHO05D009176 1.8e-17 93.2 128 34.4
Os10g0546100 Oryza sativa ssp. japonica HOM05D007206 ORTHO05D009176 1.8e-17 93.2 126 39.7
BcaC05g29720 Brassica carinata HOM05D007206 ORTHO05D009176 3.8e-15 85.5 139 34.5
Zm00001eb022730 Zea mays HOM05D007206 ORTHO05D009176 1.9e-14 83.2 155 33.5
Eucgr.F02194 Eucalyptus grandis HOM05D007206 ORTHO05D009176 7.2e-14 81.3 75 53.3
FAN09G1747 Fragaria x ananassa HOM05D007206 ORTHO05D022624 8.8e-12 74.3 82 41.5
SMO241G0012 Selaginella moellendorffii HOM05D007206 ORTHO05D009176 2.4e-09 66.2 120 34.2
Lalb_Chr01g0018511 Lupinus albus HOM05D007206 ORTHO05D009176 1.2e-08 63.9 54 55.6
GSVIVG01033715001 Vitis vinifera HOM05D007206 ORTHO05D009176 1.4e-06 57.0 54 44.4
GSVIVG01033719001 Vitis vinifera HOM05D007206 ORTHO05D009176 1.4e-06 57.0 54 44.4


User provided reference genes

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