Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22439 Beta vulgaris HOM05D008595 ORTHO05D010945 3.4e-133 478.4 255 100.0
EL10Ac3g06126 Beta vulgaris HOM05D008595 ORTHO05D010945 2.1e-50 203.4 174 66.1
EL10Ac5g11498 Beta vulgaris HOM05D008595 ORTHO05D010945 1.8e-49 200.3 140 75.0
EL10Ac3g06761 Beta vulgaris HOM05D008595 ORTHO05D010945 4.0e-49 199.1 129 79.1
EL10Ac3g06763 Beta vulgaris HOM05D008595 ORTHO05D010945 4.0e-49 199.1 129 79.1
EL10Ac7g16685 Beta vulgaris HOM05D008595 ORTHO05D010945 4.0e-49 199.1 126 80.2
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 4.0e-49 199.1 126 80.2
EL10Ac8g19509 Beta vulgaris HOM05D008595 ORTHO05D010945 5.2e-49 198.7 136 75.0
EL10Ac3g06466 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-48 197.6 138 74.6
EL10Ac5g11789 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-48 197.6 126 80.2
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-48 197.6 126 80.2
EL10Ac2g03126 Beta vulgaris HOM05D008595 ORTHO05D010945 3.4e-48 196.1 126 79.4
EL10Ac6g14350 Beta vulgaris HOM05D008595 ORTHO05D010945 3.4e-48 196.1 126 79.4
EL10Ac5g11888 Beta vulgaris HOM05D008595 ORTHO05D009929 7.6e-48 194.9 126 79.4
EL10Ac1g01792 Beta vulgaris HOM05D008595 ORTHO05D010945 1.3e-47 194.1 131 77.1
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 1.7e-47 193.7 126 79.4
EL10Ac5g11379 Beta vulgaris HOM05D008595 ORTHO05D010945 6.4e-47 191.8 126 78.6
EL10Ac4g08588 Beta vulgaris HOM05D008595 ORTHO05D010945 1.4e-46 190.7 129 75.2
EL10Ac5g11465 Beta vulgaris HOM05D008595 ORTHO05D010945 2.4e-46 189.9 131 75.6
EL10Ac8g19368 Beta vulgaris HOM05D008595 ORTHO05D010945 1.6e-45 187.2 164 64.6
EL10Ac6g14179 Beta vulgaris HOM05D008595 ORTHO05D010945 1.7e-44 183.7 131 73.3
EL10Ac8g19872 Beta vulgaris HOM05D008595 ORTHO05D010945 6.6e-44 181.8 176 60.8
EL10Ac5g10887 Beta vulgaris HOM05D008595 ORTHO05D010945 8.6e-44 181.4 126 76.2
EL10Ac8g19685 Beta vulgaris HOM05D008595 ORTHO05D010945 1.5e-43 180.6 121 77.7
EL10Ac5g11817 Beta vulgaris HOM05D008595 ORTHO05D010945 1.9e-43 180.3 126 76.2
EL10Ac5g11348 Beta vulgaris HOM05D008595 ORTHO05D010945 5.6e-43 178.7 126 75.4
EL10Ac9g20868 Beta vulgaris HOM05D008595 ORTHO05D010945 5.6e-43 178.7 126 75.4
EL10Ac1g02242 Beta vulgaris HOM05D008595 ORTHO05D010945 8.1e-42 174.9 126 73.8
EL10Ac5g11175 Beta vulgaris HOM05D008595 ORTHO05D010945 1.1e-41 174.5 126 74.6
EL10Ac1g01935 Beta vulgaris HOM05D008595 ORTHO05D010945 5.3e-33 145.6 166 54.8
EL10As20g24215 Beta vulgaris HOM05D008595 ORTHO05D010945 7.9e-29 131.7 129 58.1
AUR62030100 Chenopodium quinoa HOM05D008595 ORTHO05D010945 1.8e-25 120.6 129 51.2
AUR62040876 Chenopodium quinoa HOM05D008595 ORTHO05D010945 6.0e-21 105.5 142 47.2
EL10Ac6g14559 Beta vulgaris HOM05D008595 ORTHO05D010945 8.7e-20 101.7 81 65.4
EL10Ac4g10190 Beta vulgaris HOM05D002345 ORTHO05D002391 1.9e-19 100.5 61 83.6
AUR62035501 Chenopodium quinoa HOM05D008595 ORTHO05D010945 2.8e-18 96.7 76 60.5
EL10Ac1g01494 Beta vulgaris HOM05D008595 ORTHO05D010945 3.1e-17 93.2 82 57.3
AUR62000161 Chenopodium quinoa HOM05D002345 ORTHO05D002391 4.5e-16 89.4 129 49.6
AUR62039852 Chenopodium quinoa HOM05D002345 ORTHO05D002391 1.3e-15 87.8 129 48.1
Hund21997 Selenicereus undatus HOM05D002345 ORTHO05D002391 6.0e-13 79.0 61 65.6
Hund07458 Selenicereus undatus HOM05D002345 ORTHO05D002391 1.8e-12 77.4 61 67.2
EL10Ac6g14558 Beta vulgaris HOM05D003539 ORTHO05D004111 2.5e-11 73.6 47 78.7
Sc16g0011240 Simmondsia chinensis HOM05D002345 ORTHO05D002391 3.3e-11 73.2 58 69.0
Hund10114 Selenicereus undatus HOM05D002345 ORTHO05D002391 5.7e-11 72.4 61 60.7
Ah.06g193830 Amaranthus hybridus HOM05D002345 ORTHO05D002391 4.8e-10 69.3 60 61.7
AUR62010869 Chenopodium quinoa HOM05D008595 ORTHO05D010945 8.2e-10 68.6 71 62.0
Haze_23182 Corylus avellana HOM05D002345 ORTHO05D002391 2.4e-09 67.0 62 58.1
Prupe.4G255700 Prunus persica HOM05D002345 ORTHO05D002391 3.1e-09 66.6 62 59.7
GSVIVG01031545001 Vitis vinifera HOM05D002345 ORTHO05D002391 5.3e-09 65.9 62 61.3
vmacro04122 Vaccinium macrocarpon HOM05D002345 ORTHO05D002391 6.9e-09 65.5 61 57.4
CSS0033129 Camellia sinensis var. sinensis HOM05D002345 ORTHO05D002391 9.0e-09 65.1 58 58.6
Manes.06G161700 Manihot esculenta HOM05D002345 ORTHO05D002391 1.2e-08 64.7 59 62.7
MD03G1171100 Malus domestica HOM05D002345 ORTHO05D002391 1.5e-08 64.3 62 58.1
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 1.5e-08 64.3 61 57.4
EL10Ac6g14177 Beta vulgaris HOM05D008595 ORTHO05D010945 2.0e-08 63.9 43 69.8
CiPaw.13G154100 Carya illinoinensis HOM05D002345 ORTHO05D002391 2.0e-08 63.9 62 58.1
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-08 63.5 137 34.3
CANSAT54G0547 Cannabis sativa HOM05D002345 ORTHO05D002391 3.4e-08 63.2 67 55.2
Gohir.A13G217200 Gossypium hirsutum HOM05D002345 ORTHO05D002391 3.4e-08 63.2 56 58.9
Dinv36221 Davidia involucrata HOM05D002345 ORTHO05D002391 4.5e-08 62.8 61 57.4
Migut.N02348 Erythranthe guttata HOM05D002345 ORTHO05D002391 4.5e-08 62.8 65 52.3
Eucgr.J00737 Eucalyptus grandis HOM05D002345 ORTHO05D002391 4.5e-08 62.8 66 53.0
Actinidia16350 Actinidia chinensis HOM05D002345 ORTHO05D002391 5.8e-08 62.4 58 56.9
FvH4_3g28360 Fragaria vesca HOM05D002345 ORTHO05D002391 5.8e-08 62.4 62 58.1
Hma1.2p1_1537F.1_g289515 Hydrangea macrophylla HOM05D002345 ORTHO05D002391 7.6e-08 62.0 58 56.9
FAN21G1575 Fragaria x ananassa HOM05D002345 ORTHO05D002391 1.0e-07 61.6 62 56.5
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 1.0e-07 61.6 134 31.3
QL01p003745 Quercus lobata HOM05D002345 ORTHO05D002391 1.7e-07 60.8 62 58.1
MSTRG.12456 Avicennia marina HOM05D002345 ORTHO05D002391 2.2e-07 60.5 65 49.2
Ciclev10014072m.g Citrus clementina HOM05D002345 ORTHO05D002391 2.2e-07 60.5 59 59.3
Duzib150G0243 Durio zibethinus HOM05D002345 ORTHO05D002391 2.2e-07 60.5 62 54.8
Gohir.D13G220800 Gossypium hirsutum HOM05D002345 ORTHO05D002391 2.2e-07 60.5 56 57.1
Gorai.013G251800 Gossypium raimondii HOM05D002345 ORTHO05D002391 2.2e-07 60.5 56 57.1
Manes.14G005100 Manihot esculenta HOM05D002345 ORTHO05D002391 2.2e-07 60.5 59 57.6
Potri.001G255000 Populus trichocarpa HOM05D002345 ORTHO05D002391 2.2e-07 60.5 59 57.6
FAN16G0559 Fragaria x ananassa HOM05D002345 ORTHO05D002391 2.9e-07 60.1 62 54.8
PGR119G0483 Punica granatum HOM05D002345 ORTHO05D002391 3.8e-07 59.7 62 54.8
Solyc11g065260.3 Solanum lycopersicum HOM05D002345 ORTHO05D002391 3.8e-07 59.7 61 47.5
Sopen11g025010 Solanum pennellii HOM05D002345 ORTHO05D002391 3.8e-07 59.7 61 47.5
Ah.04g151410 Amaranthus hybridus HOM05D002345 ORTHO05D002391 5.0e-07 59.3 61 54.1
arahy.Tifrunner.gnm1.ann1.D7XUPH Arachis hypogaea HOM05D002345 ORTHO05D002391 5.0e-07 59.3 62 50.0
FAN11G2479 Fragaria x ananassa HOM05D002345 ORTHO05D002391 5.0e-07 59.3 62 56.5
SGA_v2.0_scaffold42G16079 Striga asiatica HOM05D002345 ORTHO05D002391 5.0e-07 59.3 65 49.2
Potri.009G050200 Populus trichocarpa HOM05D002345 ORTHO05D002391 6.5e-07 58.9 59 55.9
RcHm_v2.0_Chr5g0053371 Rosa chinensis HOM05D002345 ORTHO05D002391 6.5e-07 58.9 62 54.8
AUR62026110 Chenopodium quinoa HOM05D002345 ORTHO05D002391 8.4e-07 58.5 61 54.1
Sabra09G0036800 Salix brachista HOM05D002345 ORTHO05D002391 8.4e-07 58.5 59 55.9
Thecc.09G240500 Theobroma cacao HOM05D002345 ORTHO05D002391 8.4e-07 58.5 62 54.8
TAR623G1330 Trochodendron aralioides HOM05D002345 ORTHO05D002391 8.4e-07 58.5 62 54.8
Thhalv10016164m.g Eutrema salsugineum HOM05D002345 ORTHO05D002391 1.1e-06 58.2 62 53.2
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 1.1e-06 58.2 146 28.8
ClCG02G023110 Citrullus lanatus HOM05D002345 ORTHO05D002391 1.4e-06 57.8 61 50.8
PSO384G2553 Papaver somniferum HOM05D002345 ORTHO05D002391 1.4e-06 57.8 62 54.8
AT5G12430 Arabidopsis thaliana HOM05D002345 ORTHO05D002391 1.9e-06 57.4 61 54.1
AUR62024519 Chenopodium quinoa HOM05D002345 ORTHO05D002391 1.9e-06 57.4 61 52.5
DCAR_023772 Daucus carota HOM05D002345 ORTHO05D002391 1.9e-06 57.4 61 49.2
Lalb_Chr01g0001141 Lupinus albus HOM05D002345 ORTHO05D002391 1.9e-06 57.4 62 50.0
Nn7g36421 Nelumbo nucifera HOM05D002345 ORTHO05D002391 1.9e-06 57.4 61 55.7
Aa31LG1G23560 Aethionema arabicum HOM05D002345 ORTHO05D002391 2.5e-06 57.0 61 50.8
arahy.Tifrunner.gnm1.ann1.XW46IK Arachis hypogaea HOM05D002345 ORTHO05D002391 2.5e-06 57.0 62 48.4
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-06 57.0 173 29.5
TAR633G1899 Trochodendron aralioides HOM05D002345 ORTHO05D002391 2.5e-06 57.0 59 55.9
FAN25G1021 Fragaria x ananassa HOM05D002345 ORTHO05D002391 3.2e-06 56.6 62 53.2
MD15G1435100 Malus domestica HOM05D008595 ORTHO05D000669 3.2e-06 56.6 143 28.0
Sed0010554 Sechium edule HOM05D002345 ORTHO05D002391 3.2e-06 56.6 67 46.3
TWI23G0801 Tripterygium wilfordii HOM05D002345 ORTHO05D002391 3.2e-06 56.6 59 55.9
CARHR200670 Cardamine hirsuta HOM05D002345 ORTHO05D002391 4.2e-06 56.2 62 53.2
Hma1.2p1_2169F.1_g315930 Hydrangea macrophylla HOM05D002345 ORTHO05D002391 4.2e-06 56.2 62 53.2
PSO339G4712 Papaver somniferum HOM05D002345 ORTHO05D002391 4.2e-06 56.2 62 54.8
Sp6g31200 Schrenkiella parvula HOM05D002345 ORTHO05D002391 4.2e-06 56.2 62 51.6
Sc13g0001560 Simmondsia chinensis HOM05D002345 ORTHO05D002391 4.2e-06 56.2 61 52.5
AL6G23250 Arabidopsis lyrata HOM05D002345 ORTHO05D002391 5.5e-06 55.8 62 54.8
C04p02780 Brassica napus HOM05D002345 ORTHO05D002391 5.5e-06 55.8 63 50.8
C09p64460 Brassica napus HOM05D002345 ORTHO05D002391 5.5e-06 55.8 62 50.0
BolC4t21918H Brassica oleracea HOM05D002345 ORTHO05D002391 5.5e-06 55.8 63 50.8
BolC9t59281H Brassica oleracea HOM05D002345 ORTHO05D002391 5.5e-06 55.8 62 50.0
Haze_19782 Corylus avellana HOM05D002345 ORTHO05D002391 5.5e-06 55.8 58 51.7
Nitab4.5_0005230g0040 Nicotiana tabacum HOM05D002345 ORTHO05D002391 5.5e-06 55.8 61 45.9
Peaxi162Scf00004g03717 Petunia axillaris HOM05D002345 ORTHO05D002391 5.5e-06 55.8 61 45.9
MELO3C014576.2 Cucumis melo HOM05D002345 ORTHO05D002391 7.2e-06 55.5 61 49.2
Glyma.12G021400 Glycine max HOM05D002345 ORTHO05D002391 7.2e-06 55.5 62 48.4
Sabra16G0157100 Salix brachista HOM05D002345 ORTHO05D002391 7.2e-06 55.5 59 54.2
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.2e-06 55.5 118 31.4
AT2G41520 Arabidopsis thaliana HOM05D002345 ORTHO05D002391 9.3e-06 55.1 61 49.2
BcaNung04069 Brassica carinata HOM05D002345 ORTHO05D002391 9.3e-06 55.1 63 50.8
A05p02340 Brassica napus HOM05D002345 ORTHO05D002391 9.3e-06 55.1 63 54.0
BraA05t19228Z Brassica rapa HOM05D002345 ORTHO05D002391 9.3e-06 55.1 63 54.0
Carub.0006s1094 Capsella rubella HOM05D002345 ORTHO05D002391 9.3e-06 55.1 62 51.6
CAN.G71.12 Capsicum annuum HOM05D002345 ORTHO05D002391 9.3e-06 55.1 63 46.0
Cfa016771 Carpinus fangiana HOM05D002345 ORTHO05D002391 9.3e-06 55.1 58 53.4
COL.COLO4_36472 Corchorus olitorius HOM05D002345 ORTHO05D002391 9.3e-06 55.1 56 57.1
Glyma.11G095300 Glycine max HOM05D002345 ORTHO05D002391 9.3e-06 55.1 62 48.4


User provided reference genes

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