Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 3.1e-76 288.5 160 100.0
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.7e-50 203.0 160 71.9
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 9.6e-41 170.6 162 64.2
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 9.9e-38 160.6 161 55.9
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 4.9e-37 158.3 160 57.5
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 6.4e-37 157.9 161 54.7
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 6.4e-37 157.9 156 57.7
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 1.1e-36 157.1 160 56.9
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 1.9e-36 156.4 161 58.4
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 4.2e-36 155.2 158 55.1
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 5.4e-36 154.8 162 57.4
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 1.2e-35 153.7 158 58.2
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 2.7e-35 152.5 150 60.0
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 7.8e-35 151.0 162 52.5
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 1.3e-34 150.2 155 54.2
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.3e-34 149.4 136 59.6
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.3e-34 149.4 136 59.6
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 3.9e-34 148.7 160 51.9
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 5.1e-34 148.3 160 53.8
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 6.6e-34 147.9 131 62.6
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.1e-33 147.1 136 57.4
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 1.9e-33 146.4 161 59.6
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 3.3e-33 145.6 161 56.5
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 5.6e-33 144.8 137 56.9
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 5.6e-33 144.8 160 56.9
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 5.6e-33 144.8 160 54.4
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 5.6e-33 144.8 100 75.0
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 9.6e-33 144.1 129 61.2
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.3e-32 143.7 157 52.9
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.3e-32 143.7 161 54.0
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.1e-32 142.9 166 56.6
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 2.1e-32 142.9 160 56.2
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 2.1e-32 142.9 160 51.2
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 2.8e-32 142.5 160 56.2
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.8e-32 142.5 160 49.4
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 4.8e-32 141.7 128 59.4
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 4.8e-32 141.7 156 53.8
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 6.2e-32 141.4 128 58.6
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 8.1e-32 141.0 167 53.3
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 8.1e-32 141.0 160 50.6
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 1.4e-31 140.2 152 52.6
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.4e-31 140.2 155 55.5
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 2.4e-31 139.4 165 53.3
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 3.1e-31 139.0 160 50.0
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 5.3e-31 138.3 124 59.7
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 5.3e-31 138.3 160 53.8
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 5.3e-31 138.3 159 47.8
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 5.3e-31 138.3 101 71.3
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 6.9e-31 137.9 161 49.7
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 6.9e-31 137.9 155 54.8
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 9.0e-31 137.5 165 55.8
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 7.6e-30 134.4 159 48.4
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.3e-29 133.7 138 55.1
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 1.7e-29 133.3 140 54.3
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 2.2e-29 132.9 157 49.0
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 2.9e-29 132.5 161 53.4
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 4.9e-29 131.7 138 54.3
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 4.9e-29 131.7 138 54.3
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 6.4e-29 131.3 138 54.3
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 6.4e-29 131.3 134 51.5
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 1.4e-28 130.2 159 53.5
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 1.9e-28 129.8 138 53.6
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 2.4e-28 129.4 137 52.6
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 2.4e-28 129.4 162 48.1
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 3.2e-28 129.0 138 54.3
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 5.4e-28 128.3 165 51.5
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 5.4e-28 128.3 154 48.7
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 7.1e-28 127.9 142 48.6
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 1.2e-27 127.1 190 43.2
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 2.1e-27 126.3 154 46.8
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 2.7e-27 125.9 164 47.0
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 2.7e-27 125.9 133 52.6
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 6.0e-27 124.8 166 48.8
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 6.0e-27 124.8 127 54.3
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 6.0e-27 124.8 199 42.2
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 1.0e-26 124.0 156 48.1
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.8e-26 123.2 136 50.7
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 2.3e-26 122.9 132 53.0
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 2.3e-26 122.9 153 47.1
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 6.7e-26 121.3 160 45.6
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 1.5e-25 120.2 133 48.9
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 9.6e-25 117.5 156 53.8
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 2.8e-24 115.9 128 50.8
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 3.7e-24 115.5 154 48.7
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 3.1e-23 112.5 127 49.6
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 6.9e-23 111.3 94 61.7
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 6.9e-23 111.3 159 44.0
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 6.9e-23 111.3 136 57.4
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.2e-22 110.5 127 49.6
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.2e-22 110.5 117 53.8
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 2.6e-22 109.4 163 46.0
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 3.4e-22 109.0 74 73.0
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 7.6e-22 107.8 158 44.9
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 2.2e-21 106.3 134 49.3
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 2.9e-21 105.9 164 43.9
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.9e-20 103.2 124 50.0
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 9.3e-20 100.9 117 50.4
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 1.2e-19 100.5 95 57.9
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 1.2e-19 100.5 160 39.4
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 1.2e-19 100.5 160 39.4
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 2.3e-18 96.3 163 47.2
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 3.0e-18 95.9 149 41.6
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 2.5e-17 92.8 94 54.3
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 3.7e-16 89.0 147 39.5
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 6.2e-16 88.2 98 53.1
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 8.2e-16 87.8 97 53.6
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 6.9e-15 84.7 104 43.3
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 2.0e-14 83.2 121 45.5
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 2.6e-14 82.8 117 41.0
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 2.6e-14 82.8 132 41.7
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 5.8e-14 81.6 112 50.9
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 1.3e-13 80.5 140 44.3
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 1.3e-13 80.5 113 48.7
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 1.7e-13 80.1 171 42.7
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 6.5e-13 78.2 88 52.3
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 1.1e-12 77.4 109 45.0
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 2.5e-12 76.3 163 36.2
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 4.2e-12 75.5 86 46.5
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 5.5e-12 75.1 55 65.5
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 5.5e-12 75.1 131 40.5
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 5.5e-12 75.1 119 47.9
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 7.1e-12 74.7 89 49.4
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 7.1e-12 74.7 136 44.9
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 2.1e-11 73.2 74 50.0
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 2.7e-11 72.8 109 43.1
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 2.3e-10 69.7 90 42.2
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 6.7e-10 68.2 106 43.4
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 8.7e-10 67.8 118 46.6
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 1.1e-09 67.4 122 35.2
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 1.3e-08 63.9 154 31.2
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 7.7e-06 54.7 93 40.9


User provided reference genes

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