Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 2.7e-183 645.2 322 100.0
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 7.1e-160 567.4 321 88.2
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 4.3e-157 558.1 350 81.7
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 3.1e-131 472.2 289 79.6
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 5.5e-128 461.5 312 72.1
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 4.6e-127 458.4 310 72.6
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 3.0e-126 455.7 254 89.0
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.3e-125 452.2 320 74.1
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 4.3e-125 451.8 312 70.5
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 4.3e-125 451.8 310 71.3
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 7.4e-125 451.1 310 71.6
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 4.8e-124 448.4 312 71.5
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.8e-124 448.4 312 71.5
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 6.3e-124 448.0 310 71.3
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 2.4e-123 446.0 310 72.3
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 4.1e-123 445.3 312 69.9
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 6.9e-123 444.5 310 71.3
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 9.0e-123 444.1 329 67.8
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 9.0e-123 444.1 310 70.6
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 4.5e-122 441.8 310 71.0
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.3e-121 440.3 312 69.2
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.3e-121 440.3 312 68.6
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.2e-121 439.5 310 68.4
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 2.9e-121 439.1 310 69.0
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 2.9e-121 439.1 318 69.5
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 5.0e-121 438.3 312 69.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 6.5e-121 438.0 312 68.3
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 8.4e-121 437.6 312 67.9
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.4e-120 436.8 316 67.7
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 9.3e-120 434.1 327 68.5
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 9.3e-120 434.1 315 68.6
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 3.5e-119 432.2 315 68.9
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 7.9e-119 431.0 310 67.7
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.3e-118 430.3 312 66.7
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 3.0e-118 429.1 312 67.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 3.9e-118 428.7 311 68.5
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 3.9e-118 428.7 325 64.3
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 5.1e-118 428.3 312 67.3
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 6.7e-118 427.9 322 66.5
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.1e-117 427.2 311 68.2
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.1e-117 427.2 313 69.3
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.9e-117 426.4 315 65.7
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.9e-117 426.4 310 66.1
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 5.7e-117 424.9 313 67.4
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 9.7e-117 424.1 318 66.7
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.6e-116 423.3 311 67.8
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.6e-116 423.3 322 64.6
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.2e-116 422.9 315 67.0
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 4.8e-116 421.8 311 66.2
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.1e-115 420.6 311 66.6
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.1e-115 420.6 311 65.9
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.4e-115 420.2 311 66.2
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.8e-115 419.9 311 65.6
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 2.4e-115 419.5 309 67.6
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 3.1e-115 419.1 311 65.6
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 4.1e-115 418.7 289 70.2
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 2.6e-114 416.0 314 65.3
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.5e-114 415.2 308 67.2
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.0e-113 414.1 312 66.0
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.0e-113 414.1 312 66.0
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.3e-113 413.7 312 65.7
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.9e-112 409.8 312 64.1
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 3.2e-112 409.1 311 65.9
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 4.6e-111 405.2 330 62.4
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 4.6e-111 405.2 290 69.0
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 4.6e-111 405.2 288 70.8
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 7.9e-111 404.4 312 64.1
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.8e-110 403.3 336 62.2
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 5.1e-110 401.7 310 64.8
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.1e-109 400.6 314 63.1
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 4.3e-109 398.7 318 64.5
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 5.7e-109 398.3 318 63.8
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 3.7e-108 395.6 318 63.5
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.4e-107 393.7 318 63.5
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.4e-107 393.7 323 62.8
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 5.3e-107 391.7 309 64.7
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 6.9e-107 391.3 269 71.0
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.9e-105 386.0 310 64.2
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 3.2e-104 382.5 312 62.5
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.6e-103 380.2 312 59.9
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 7.9e-103 377.9 313 59.7
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 6.7e-102 374.8 309 60.5
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.1e-101 374.0 313 58.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 5.7e-101 371.7 275 68.4
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.8e-99 366.7 309 59.5
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.2e-90 337.4 309 52.1
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.0e-89 334.3 315 55.2
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 2.9e-89 332.8 290 55.2
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.5e-88 330.5 237 70.0
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 5.5e-88 328.6 234 67.9
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 3.6e-87 325.9 309 55.7
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 8.3e-76 288.1 324 46.3
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 2.4e-75 286.6 321 48.0
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.2e-75 284.6 317 45.7
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.6e-74 283.9 223 62.3
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.5e-74 282.7 320 45.0
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.5e-74 282.7 320 45.0
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.1e-71 271.9 320 45.0
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 8.9e-70 268.1 260 52.7
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 2.6e-69 266.5 316 48.7
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.4e-69 266.2 327 44.3
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.5e-69 265.0 309 43.7
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-68 263.8 320 43.4
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.4e-67 260.8 306 44.1
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 6.8e-62 241.9 327 41.6
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 7.5e-61 238.4 310 43.9
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 2.7e-50 203.4 309 41.1
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 8.6e-49 198.4 213 47.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 2.6e-37 160.2 140 58.6
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.5e-26 123.2 115 53.9
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 2.8e-23 113.6 110 52.7


User provided reference genes

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