Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 0.0e+00 1299.3 703 100.0
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.0e-219 765.8 709 62.5
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 5.8e-199 698.4 709 59.1
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 3.2e-165 586.3 713 52.0
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 5.2e-139 499.2 777 44.7
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 4.5e-74 283.5 730 33.7
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 4.5e-74 283.5 730 33.7
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 5.8e-74 283.1 853 32.6
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.3e-73 282.0 745 34.0
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 6.0e-71 273.1 742 33.3
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.8e-70 271.6 750 33.1
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 8.7e-70 269.2 765 33.6
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 5.6e-69 266.5 910 30.5
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 3.6e-68 263.8 740 33.5
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 3.1e-67 260.8 777 33.3
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 3.1e-67 260.8 751 32.2
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 5.3e-67 260.0 763 32.0
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 1.2e-66 258.8 770 31.8
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 3.4e-66 257.3 766 33.2
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 7.6e-66 256.1 746 34.5
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 2.9e-65 254.2 781 33.2
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 3.8e-65 253.8 759 31.2
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.9e-64 251.5 776 31.4
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 2.4e-64 251.1 735 33.1
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 3.2e-64 250.8 757 33.9
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 1.6e-63 248.4 753 32.4
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 6.0e-63 246.5 836 31.3
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.3e-62 244.6 750 33.7
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 6.7e-62 243.0 843 30.5
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.5e-61 241.9 717 31.1
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 4.8e-60 236.9 732 32.1
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 6.2e-60 236.5 874 30.0
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.1e-59 235.7 750 32.5
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 1.8e-59 235.0 776 29.6
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.2e-58 232.3 919 28.8
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 2.0e-58 231.5 739 32.3
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.6e-58 231.1 844 30.9
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.5e-56 224.6 670 34.3
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 4.2e-56 223.8 665 34.7
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 7.1e-56 223.0 759 32.1
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.2e-55 222.2 671 33.7
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 4.6e-55 220.3 854 30.3
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 7.9e-55 219.5 745 29.8
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 1.0e-54 219.2 744 32.0
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 2.3e-54 218.0 746 30.2
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 5.1e-54 216.9 733 30.7
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 6.7e-54 216.5 704 30.5
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 8.7e-54 216.1 705 30.6
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 1.1e-53 215.7 817 29.5
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 1.9e-53 214.9 781 30.2
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 4.3e-53 213.8 696 30.9
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 9.6e-53 212.6 742 30.6
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.3e-52 212.2 767 30.2
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.3e-52 212.2 726 32.4
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.1e-52 211.5 758 30.7
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 6.3e-52 209.9 708 31.6
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 8.2e-52 209.5 680 30.4
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 3.1e-51 207.6 748 30.2
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 5.3e-51 206.8 703 31.3
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 2.0e-50 204.9 749 29.5
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 2.6e-50 204.5 838 29.1
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 4.5e-50 203.8 714 28.3
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 6.5e-49 199.9 737 31.5
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 1.9e-48 198.4 765 28.6
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 3.2e-48 197.6 742 30.3
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 9.3e-48 196.1 761 29.8
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 9.3e-48 196.1 769 27.8
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 2.7e-47 194.5 713 29.0
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 6.1e-47 193.4 665 32.0
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 7.9e-47 193.0 786 29.4
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 8.7e-46 189.5 949 27.7
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 3.3e-45 187.6 379 39.1
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 3.7e-44 184.1 778 28.0
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 1.8e-43 181.8 669 30.0
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.1e-43 181.0 743 28.5
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 4.1e-43 180.6 744 30.8
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 4.1e-43 180.6 635 31.7
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.4e-42 177.6 689 31.2
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 1.0e-41 176.0 750 28.9
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 5.0e-41 173.7 645 29.6
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 6.5e-41 173.3 734 30.4
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 6.5e-41 173.3 721 28.4
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 1.1e-40 172.6 783 28.0
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.9e-40 171.8 764 27.5
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 3.2e-40 171.0 364 36.8
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 4.2e-40 170.6 685 29.6
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 6.1e-39 166.8 869 26.8
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 7.9e-39 166.4 422 33.6
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 3.0e-38 164.5 459 33.8
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 8.8e-38 162.9 810 26.0
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 2.0e-37 161.8 656 28.8
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.0e-37 161.8 945 26.5
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 3.7e-36 157.5 685 28.3
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 6.3e-36 156.8 732 28.1
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.4e-35 155.6 786 27.6
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 9.1e-35 152.9 806 26.6
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.2e-34 152.5 712 27.7
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 5.9e-34 150.2 756 27.8
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 1.7e-33 148.7 735 28.3
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 2.9e-33 147.9 568 30.1
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 6.5e-33 146.7 939 26.1
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 6.5e-33 146.7 789 27.0
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 1.4e-32 145.6 629 26.6
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 2.5e-32 144.8 759 27.3
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 2.5e-32 144.8 736 28.4
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 4.2e-32 144.1 739 28.3
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 4.2e-32 144.1 735 26.4
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 6.1e-31 140.2 946 25.7
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 7.9e-31 139.8 768 28.3
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 3.9e-30 137.5 548 28.8
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 2.0e-29 135.2 752 26.2
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 3.3e-29 134.4 969 25.0
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 4.8e-28 130.6 683 27.8
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 9.1e-27 126.3 619 26.0
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 1.3e-25 122.5 745 26.3
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 1.7e-25 122.1 755 24.4
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 4.2e-24 117.5 798 26.3
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 4.7e-23 114.0 135 50.4
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 1.8e-22 112.1 747 25.8
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 1.8e-22 112.1 445 28.8
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 4.0e-22 110.9 119 52.1
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 5.7e-21 107.1 75 68.0
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 8.2e-20 103.2 130 47.7
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 2.4e-19 101.7 451 29.7
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 5.9e-18 97.1 630 26.0
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 3.8e-17 94.4 743 26.0
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 5.0e-17 94.0 574 27.5
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 8.5e-17 93.2 106 51.9
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.9e-16 92.0 274 31.4
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 7.2e-16 90.1 382 29.3
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 1.6e-15 89.0 127 40.9
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 4.0e-14 84.3 138 38.4
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 4.0e-14 84.3 123 44.7
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 8.8e-14 83.2 104 43.3
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 3.4e-13 81.3 654 26.0
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 9.8e-13 79.7 81 44.4
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 1.4e-11 75.9 112 40.2
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 1.2e-10 72.8 51 62.7
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 3.5e-10 71.2 84 40.5
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.9e-08 65.5 153 36.6
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 1.6e-07 62.4 116 39.7
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 1.8e-06 58.9 97 37.1


User provided reference genes

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