Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.4e-58 229.9 167 100.0
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 2.5e-31 139.4 166 49.4
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 1.6e-30 136.7 70 90.0
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 2.0e-28 129.8 105 60.0
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 2.0e-28 129.8 69 84.1
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 2.6e-28 129.4 103 61.2
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 3.3e-28 129.0 71 84.5
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 5.7e-28 128.3 69 84.1
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 7.4e-28 127.9 71 78.9
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 1.3e-27 127.1 105 58.1
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 1.7e-27 126.7 71 81.7
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 2.2e-27 126.3 71 81.7
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 2.8e-27 125.9 69 81.2
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 2.8e-27 125.9 71 80.3
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.8e-27 125.9 71 80.3
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 4.8e-27 125.2 72 79.2
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 4.8e-27 125.2 72 79.2
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 6.3e-27 124.8 72 76.4
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 8.2e-27 124.4 71 74.6
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 8.2e-27 124.4 71 74.6
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 8.2e-27 124.4 71 80.3
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 8.2e-27 124.4 71 80.3
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 8.2e-27 124.4 71 80.3
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.1e-26 124.0 71 77.5
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 1.1e-26 124.0 71 78.9
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.4e-26 123.6 101 56.4
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.4e-26 123.6 101 56.4
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.4e-26 123.6 101 56.4
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.4e-26 123.6 101 56.4
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.4e-26 123.6 101 56.4
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.8e-26 123.2 103 57.3
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 2.4e-26 122.9 71 73.2
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 2.4e-26 122.9 101 56.4
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.4e-26 122.9 69 76.8
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 2.4e-26 122.9 71 78.9
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.4e-26 122.9 71 76.1
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 3.1e-26 122.5 71 77.5
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.1e-26 122.5 71 77.5
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 3.1e-26 122.5 71 77.5
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 4.1e-26 122.1 71 73.2
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 4.1e-26 122.1 72 75.0
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 5.3e-26 121.7 101 55.4
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 5.3e-26 121.7 70 75.7
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 6.9e-26 121.3 70 77.1
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 6.9e-26 121.3 108 63.9
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 6.9e-26 121.3 69 79.7
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 6.9e-26 121.3 68 79.4
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 9.1e-26 120.9 71 73.2
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 9.1e-26 120.9 71 71.8
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.2e-25 120.6 71 74.6
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 1.2e-25 120.6 68 77.9
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 2.0e-25 119.8 102 55.9
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 2.0e-25 119.8 71 76.1
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.0e-25 119.8 71 74.6
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 2.0e-25 119.8 71 77.5
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 2.6e-25 119.4 71 77.5
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.4e-25 119.0 71 77.5
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 3.4e-25 119.0 71 71.8
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 4.5e-25 118.6 68 75.0
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 4.5e-25 118.6 68 75.0
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.5e-25 118.6 71 77.5
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 5.9e-25 118.2 71 71.8
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.9e-25 118.2 71 71.8
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.9e-25 118.2 71 71.8
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.9e-25 118.2 71 71.8
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 5.9e-25 118.2 71 74.6
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.0e-24 117.5 71 74.6
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.0e-24 117.5 72 70.8
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.3e-24 117.1 68 76.5
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.7e-24 116.7 69 73.9
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 2.2e-24 116.3 71 73.2
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.2e-24 116.3 68 76.5
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 2.2e-24 116.3 68 76.5
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 2.2e-24 116.3 70 70.0
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.9e-24 115.9 104 56.7
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 2.9e-24 115.9 71 73.2
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.8e-24 115.5 68 75.0
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.8e-24 115.5 68 75.0
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 3.8e-24 115.5 71 71.8
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 5.0e-24 115.2 70 74.3
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 8.5e-24 114.4 70 74.3
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 1.1e-23 114.0 68 70.6
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 1.1e-23 114.0 69 72.5
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.9e-23 113.2 69 71.0
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 4.2e-23 112.1 70 72.9
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.6e-22 110.2 67 73.1
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 1.6e-22 110.2 67 73.1
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 6.1e-22 108.2 93 68.8
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.0e-21 105.9 93 67.7
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 6.7e-21 104.8 64 76.6
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 2.6e-20 102.8 70 62.9
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 2.2e-19 99.8 69 71.0
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 1.8e-18 96.7 72 59.7
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 2.4e-18 96.3 70 61.4
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.6e-17 93.6 68 58.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.0e-16 90.9 58 69.0
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 1.3e-16 90.5 59 66.1
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.2e-14 84.0 48 72.9
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 8.0e-14 81.3 56 58.9


User provided reference genes

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