Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21934 Beta vulgaris HOM05D002549 ORTHO05D002755 1.0e-59 233.4 133 100.0
Ah.01g020790 Amaranthus hybridus HOM05D002015 ORTHO05D002395 5.9e-36 154.5 133 62.4
AUR62016372 Chenopodium quinoa HOM05D002030 ORTHO05D004391 1.0e-27 127.1 135 54.8
AUR62011553 Chenopodium quinoa HOM05D002549 ORTHO05D002755 6.1e-25 117.9 126 53.2
Sc10g0007150 Simmondsia chinensis HOM05D002549 ORTHO05D002755 6.3e-14 81.3 139 41.0
Sc10g0005750 Simmondsia chinensis HOM05D002549 ORTHO05D002755 2.7e-12 75.9 142 39.4
Lsat_1_v5_gn_5_132361 Lactuca sativa HOM05D002549 ORTHO05D002755 2.3e-11 72.8 125 39.2
arahy.Tifrunner.gnm1.ann1.62RLPM Arachis hypogaea HOM05D002549 ORTHO05D002755 2.9e-11 72.4 108 39.8
arahy.Tifrunner.gnm1.ann1.CZ6M1X Arachis hypogaea HOM05D002549 ORTHO05D002755 3.9e-11 72.0 113 40.7
ClCG06G010950 Citrullus lanatus HOM05D002549 ORTHO05D002755 4.3e-10 68.6 110 41.8
Gohir.A10G075800 Gossypium hirsutum HOM05D002549 ORTHO05D002755 5.6e-10 68.2 137 38.7
BcaC05g25481 Brassica carinata HOM05D002549 ORTHO05D002755 9.5e-10 67.4 149 36.9
SGA_v2.0_scaffold5G02666 Striga asiatica HOM05D002549 ORTHO05D002755 1.2e-09 67.0 123 35.0
Glyma.13G364000 Glycine max HOM05D002549 ORTHO05D002755 1.6e-09 66.6 126 38.1
RcHm_v2.0_Chr2g0136461 Rosa chinensis HOM05D002549 ORTHO05D002755 1.6e-09 66.6 140 39.3
ClCG07G012770 Citrullus lanatus HOM05D002549 ORTHO05D002755 2.1e-09 66.2 124 35.5
Gohir.D10G075600 Gossypium hirsutum HOM05D002549 ORTHO05D002755 2.8e-09 65.9 137 38.0
Manes.11G053601 Manihot esculenta HOM05D002549 ORTHO05D002755 2.8e-09 65.9 122 34.4
THA.LOC104812501 Tarenaya hassleriana HOM05D002549 ORTHO05D002755 2.8e-09 65.9 145 37.9
C05p13560 Brassica napus HOM05D002549 ORTHO05D002755 3.6e-09 65.5 131 36.6
Duzib160G0907 Durio zibethinus HOM05D002549 ORTHO05D002755 3.6e-09 65.5 125 36.0
Manes.04G115900 Manihot esculenta HOM05D002549 ORTHO05D002755 3.6e-09 65.5 119 31.9
Sp1g13750 Schrenkiella parvula HOM05D002549 ORTHO05D002755 3.6e-09 65.5 134 36.6
Gorai.011G081600 Gossypium raimondii HOM05D002549 ORTHO05D002755 6.1e-09 64.7 143 37.8
Psat5g301360 Pisum sativum HOM05D002549 ORTHO05D002755 8.0e-09 64.3 124 35.5
Sc18g0000680 Simmondsia chinensis HOM05D002549 ORTHO05D002755 8.0e-09 64.3 109 36.7
CsaV3_1G029830 Cucumis sativus L. HOM05D002549 ORTHO05D002755 1.0e-08 63.9 113 38.1
VMungo1080G1223 Vigna mungo HOM05D002549 ORTHO05D002755 1.0e-08 63.9 128 34.4
PGR031G0796 Punica granatum HOM05D002549 ORTHO05D002755 1.4e-08 63.5 110 39.1
Potri.003G062200 Populus trichocarpa HOM05D002549 ORTHO05D002755 1.8e-08 63.2 135 33.3
A06p11440 Brassica napus HOM05D002549 ORTHO05D002755 2.3e-08 62.8 131 39.7
BolC5t30093H Brassica oleracea HOM05D002549 ORTHO05D002755 2.3e-08 62.8 146 37.7
BraA06t24322Z Brassica rapa HOM05D002549 ORTHO05D002755 2.3e-08 62.8 131 39.7
MELO3C023405.2 Cucumis melo HOM05D002549 ORTHO05D002755 2.3e-08 62.8 108 36.1
Sabra01G0139600 Salix brachista HOM05D002549 ORTHO05D002755 2.3e-08 62.8 113 36.3
AL1G27510 Arabidopsis lyrata HOM05D002549 ORTHO05D002755 3.1e-08 62.4 149 36.2
MELO3C026647.2 Cucumis melo HOM05D002549 ORTHO05D002755 3.1e-08 62.4 108 38.0
Duzib235G0326 Durio zibethinus HOM05D002549 ORTHO05D002755 3.1e-08 62.4 139 33.8
Thhalv10009053m.g Eutrema salsugineum HOM05D002549 ORTHO05D002755 3.1e-08 62.4 152 34.2
Gorai.009G130500 Gossypium raimondii HOM05D002549 ORTHO05D002755 3.1e-08 62.4 135 34.8
SGA_v2.0_scaffold37G14785 Striga asiatica HOM05D002549 ORTHO05D002755 3.1e-08 62.4 124 35.5
Phvul.005G175700 Phaseolus vulgaris HOM05D002549 ORTHO05D002755 4.0e-08 62.0 113 34.5
Sed0016403 Sechium edule HOM05D002549 ORTHO05D002755 4.0e-08 62.0 124 33.9
CiPaw.01G245100 Carya illinoinensis HOM05D002549 ORTHO05D002755 5.2e-08 61.6 125 36.8
Aa31LG7G160 Aethionema arabicum HOM05D002549 ORTHO05D002755 6.8e-08 61.2 140 35.0
Haze_16521 Corylus avellana HOM05D002549 ORTHO05D002755 6.8e-08 61.2 122 33.6
Gohir.D05G126500 Gossypium hirsutum HOM05D002549 ORTHO05D002755 6.8e-08 61.2 135 34.8
Thecc.06G070600 Theobroma cacao HOM05D002549 ORTHO05D002755 8.9e-08 60.8 138 36.2
MSTRG.11120 Avicennia marina HOM05D002549 ORTHO05D002755 1.2e-07 60.5 127 34.6
CsaV3_7G032570 Cucumis sativus L. HOM05D002549 ORTHO05D002755 1.2e-07 60.5 108 35.2
CiPaw.03G242300 Carya illinoinensis HOM05D002549 ORTHO05D002755 1.5e-07 60.1 111 32.4
Ca_01073_v3 Cicer arietinum L. HOM05D002549 ORTHO05D002755 1.5e-07 60.1 134 38.8
CsaV3_4G001430 Cucumis sativus L. HOM05D002549 ORTHO05D002755 1.5e-07 60.1 124 39.5
Hma1.2p1_0515F.1_g170200 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 1.5e-07 60.1 124 33.1
Medtr2g103380 Medicago truncatula HOM05D002549 ORTHO05D002755 1.5e-07 60.1 121 42.1
PSO455G0279 Papaver somniferum HOM05D002549 ORTHO05D002755 1.5e-07 60.1 118 33.9
TPR.G8449 Trifolium pratense HOM05D002549 ORTHO05D002755 1.5e-07 60.1 112 34.8
CARHR074300 Cardamine hirsuta HOM05D002549 ORTHO05D002755 2.0e-07 59.7 127 31.5
MELO3C017897.2 Cucumis melo HOM05D002549 ORTHO05D002755 2.0e-07 59.7 124 37.9
Peaxi162Scf00641g00003 Petunia axillaris HOM05D002549 ORTHO05D002755 2.0e-07 59.7 123 29.3
TAR626G1731 Trochodendron aralioides HOM05D002549 ORTHO05D002755 2.0e-07 59.7 117 36.8
EL10Ac8g18620 Beta vulgaris HOM05D002549 ORTHO05D002755 2.6e-07 59.3 108 36.1
Gohir.A05G125500 Gossypium hirsutum HOM05D002549 ORTHO05D002755 2.6e-07 59.3 135 34.8
QL05p027977 Quercus lobata HOM05D002549 ORTHO05D002755 2.6e-07 59.3 107 36.4
Actinidia07432 Actinidia chinensis HOM05D002549 ORTHO05D002755 3.4e-07 58.9 121 34.7
BolC8t52044H Brassica oleracea HOM05D002549 ORTHO05D002755 3.4e-07 58.9 133 33.8
AUR62011092 Chenopodium quinoa HOM05D002549 ORTHO05D002755 3.4e-07 58.9 111 36.9
Hma1.2p1_0007F.1_g005060 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 3.4e-07 58.9 116 32.8
Hma1.2p1_0018F.1_g012630 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 3.4e-07 58.9 107 35.5
PSO170G1992 Papaver somniferum HOM05D002549 ORTHO05D002755 3.4e-07 58.9 118 32.2
unitig_0.g363 Utricularia gibba HOM05D002549 ORTHO05D002755 3.4e-07 58.9 113 32.7
AT1G15400 Arabidopsis thaliana HOM05D002549 ORTHO05D002755 4.4e-07 58.5 148 35.1
MSTRG.22728 Avicennia marina HOM05D002549 ORTHO05D002755 4.4e-07 58.5 123 34.1
BcaC07g41502 Brassica carinata HOM05D002549 ORTHO05D002755 4.4e-07 58.5 134 35.1
C08p44980 Brassica napus HOM05D002549 ORTHO05D002755 4.4e-07 58.5 134 35.1
CAN.G377.7 Capsicum annuum HOM05D002549 ORTHO05D002755 4.4e-07 58.5 116 34.5
Glyma.07G031900 Glycine max HOM05D002549 ORTHO05D002755 4.4e-07 58.5 123 32.5
Carub.0001s1518 Capsella rubella HOM05D002549 ORTHO05D002755 5.8e-07 58.2 141 36.9
CARHR015940 Cardamine hirsuta HOM05D002549 ORTHO05D002755 5.8e-07 58.2 147 34.0
Dinv30577 Davidia involucrata HOM05D002549 ORTHO05D002755 5.8e-07 58.2 117 36.8
Potri.001G172100 Populus trichocarpa HOM05D002549 ORTHO05D002755 7.5e-07 57.8 122 30.3
Sp5g35620 Schrenkiella parvula HOM05D002549 ORTHO05D002755 7.5e-07 57.8 133 33.1
TWI75G0818 Tripterygium wilfordii HOM05D002549 ORTHO05D002755 7.5e-07 57.8 122 33.6
TAR383G0202 Trochodendron aralioides HOM05D002549 ORTHO05D002755 7.5e-07 57.8 113 32.7
TAR625G1243 Trochodendron aralioides HOM05D002549 ORTHO05D002755 7.5e-07 57.8 123 35.8
unitig_0.g1122 Utricularia gibba HOM05D002549 ORTHO05D002755 7.5e-07 57.8 111 35.1
Actinidia26401 Actinidia chinensis HOM05D002549 ORTHO05D002755 9.8e-07 57.4 113 36.3
Migut.D01057 Erythranthe guttata HOM05D002549 ORTHO05D002755 9.8e-07 57.4 131 30.5
Haze_25611 Corylus avellana HOM05D002549 ORTHO05D002755 1.3e-06 57.0 124 30.6
Thhalv10019690m.g Eutrema salsugineum HOM05D002549 ORTHO05D002755 1.3e-06 57.0 136 33.1
Eucgr.J03053 Eucalyptus grandis HOM05D002549 ORTHO05D002755 1.7e-06 56.6 127 33.1
Rhsim12G0192900 Rhododendron simsii HOM05D002549 ORTHO05D002755 1.7e-06 56.6 122 35.2
Ah.14g080260 Amaranthus hybridus HOM05D002549 ORTHO05D002755 2.2e-06 56.2 107 35.5
CANSAT56G3753 Cannabis sativa HOM05D002549 ORTHO05D002755 2.2e-06 56.2 122 32.8
Cpa.g.sc10.229 Carica papaya HOM05D002549 ORTHO05D002755 2.2e-06 56.2 129 36.4
Migut.I00796 Erythranthe guttata HOM05D002549 ORTHO05D002755 2.2e-06 56.2 125 32.0
Glyma.08G210800 Glycine max HOM05D002549 ORTHO05D002755 2.2e-06 56.2 114 32.5
SalBow2G0396 Salvia bowleyana HOM05D002549 ORTHO05D002755 2.2e-06 56.2 123 38.2
PGSC0003DMG400020666 Solanum tuberosum HOM05D002549 ORTHO05D002755 2.2e-06 56.2 116 36.2
A09p61420 Brassica napus HOM05D002549 ORTHO05D002755 2.9e-06 55.8 134 32.1
BraA09t41513Z Brassica rapa HOM05D002549 ORTHO05D002755 2.9e-06 55.8 134 32.1
Hma1.2p1_0665F.1_g199110 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 2.9e-06 55.8 109 36.7
PGR102G2540 Punica granatum HOM05D002549 ORTHO05D002755 2.9e-06 55.8 135 30.4
Sed0002433 Sechium edule HOM05D002549 ORTHO05D002755 2.9e-06 55.8 121 36.4
Sed0003846 Sechium edule HOM05D002549 ORTHO05D002755 2.9e-06 55.8 107 33.6
BcaB05g25290 Brassica carinata HOM05D002549 ORTHO05D002755 3.7e-06 55.5 124 33.1
AUR62033481 Chenopodium quinoa HOM05D002549 ORTHO05D002755 3.7e-06 55.5 102 37.3
ClCG09G002760 Citrullus lanatus HOM05D002549 ORTHO05D002755 3.7e-06 55.5 118 35.6
Glyma.15G009900 Glycine max HOM05D002549 ORTHO05D002755 3.7e-06 55.5 107 36.4
Lalb_Chr25g0279471 Lupinus albus HOM05D002549 ORTHO05D002755 3.7e-06 55.5 126 31.7
CiPaw.02G155200 Carya illinoinensis HOM05D002549 ORTHO05D002755 4.9e-06 55.1 132 31.1
Peaxi162Scf00984g00014 Petunia axillaris HOM05D002549 ORTHO05D002755 4.9e-06 55.1 127 30.7
Sed0007083 Sechium edule HOM05D002549 ORTHO05D002755 4.9e-06 55.1 121 32.2
Sed0026525 Sechium edule HOM05D002549 ORTHO05D002755 4.9e-06 55.1 124 33.9
CSS0010325 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 6.4e-06 54.7 121 31.4
CSS0036416 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 6.4e-06 54.7 121 31.4
MBI01_g37816_MAGBIO Magnolia biondii HOM05D002549 ORTHO05D002755 6.4e-06 54.7 108 32.4
Nn8g39394 Nelumbo nucifera HOM05D002549 ORTHO05D002755 6.4e-06 54.7 116 36.2
Sopen12g002570 Solanum pennellii HOM05D002549 ORTHO05D002755 6.4e-06 54.7 111 35.1
arahy.Tifrunner.gnm1.ann1.5SAJ1T Arachis hypogaea HOM05D002549 ORTHO05D002755 8.3e-06 54.3 124 37.9
arahy.Tifrunner.gnm1.ann1.D7QLLZ Arachis hypogaea HOM05D002549 ORTHO05D002755 8.3e-06 54.3 124 37.9
A02p23750 Brassica napus HOM05D002549 ORTHO05D002755 8.3e-06 54.3 127 33.9
Ciclev10009953m.g Citrus clementina HOM05D002549 ORTHO05D002755 8.3e-06 54.3 111 36.0
Lj3g0000921 Lotus japonicus HOM05D002549 ORTHO05D002755 8.3e-06 54.3 124 29.8
MD02G1035000 Malus domestica HOM05D002549 ORTHO05D002755 8.3e-06 54.3 123 29.3


User provided reference genes

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