Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 2.4e-68 261.9 124 100.0
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 4.5e-62 241.1 124 91.1
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 6.5e-61 237.3 123 91.1
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 2.1e-59 232.3 123 87.8
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 2.1e-59 232.3 124 87.1
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 2.7e-59 231.9 123 88.6
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 2.3e-58 228.8 123 86.2
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 2.3e-58 228.8 121 88.4
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 2.3e-58 228.8 122 86.1
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 3.0e-58 228.4 123 87.0
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 3.0e-58 228.4 124 85.5
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 3.9e-58 228.0 123 86.2
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 8.7e-58 226.9 124 83.9
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 8.7e-58 226.9 123 85.4
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.5e-57 226.1 124 84.7
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.5e-57 226.1 124 84.7
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.5e-57 226.1 124 84.7
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 1.5e-57 226.1 124 84.7
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 1.9e-57 225.7 123 85.4
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 1.9e-57 225.7 124 86.3
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 2.5e-57 225.3 123 83.7
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.5e-57 225.3 124 84.7
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 3.3e-57 224.9 124 84.7
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 5.7e-57 224.2 119 89.1
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 5.7e-57 224.2 123 83.7
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 7.4e-57 223.8 120 85.0
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 7.4e-57 223.8 123 83.7
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 9.6e-57 223.4 123 85.4
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 9.6e-57 223.4 124 83.9
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 9.6e-57 223.4 124 83.9
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 2.1e-56 222.2 123 82.1
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 2.8e-56 221.9 124 82.3
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 2.8e-56 221.9 124 82.3
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 3.7e-56 221.5 123 82.9
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 8.2e-56 220.3 124 82.3
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 8.2e-56 220.3 124 81.5
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 1.1e-55 219.9 123 82.1
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 1.1e-55 219.9 123 82.1
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 1.4e-55 219.5 122 83.6
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 1.4e-55 219.5 124 83.9
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 1.8e-55 219.2 123 82.9
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 2.4e-55 218.8 123 82.1
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 3.1e-55 218.4 124 81.5
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 4.1e-55 218.0 123 80.5
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 5.3e-55 217.6 123 80.5
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 6.9e-55 217.2 124 80.6
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 9.0e-55 216.9 124 79.8
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 9.0e-55 216.9 124 79.8
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 1.2e-54 216.5 124 80.6
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 1.2e-54 216.5 124 81.5
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 1.2e-54 216.5 123 82.1
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 1.5e-54 216.1 124 80.6
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 2.0e-54 215.7 123 80.5
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 4.5e-54 214.5 123 78.9
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 5.8e-54 214.2 114 86.8
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 5.8e-54 214.2 123 80.5
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 5.8e-54 214.2 123 78.0
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 5.8e-54 214.2 115 84.3
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 5.8e-54 214.2 122 80.3
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 5.8e-54 214.2 123 79.7
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 7.6e-54 213.8 124 79.8
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 1.3e-53 213.0 123 80.5
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 2.2e-53 212.2 123 78.0
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 2.2e-53 212.2 131 77.9
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 3.8e-53 211.5 124 77.4
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 3.8e-53 211.5 123 78.9
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 3.8e-53 211.5 115 84.3
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 6.5e-53 210.7 121 79.3
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 6.5e-53 210.7 123 79.7
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 6.5e-53 210.7 123 78.9
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 8.4e-53 210.3 120 79.2
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 8.4e-53 210.3 110 89.1
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 1.1e-52 209.9 115 80.9
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 3.2e-52 208.4 123 78.9
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 4.2e-52 208.0 123 74.8
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 7.2e-52 207.2 123 78.9
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 9.3e-52 206.8 122 77.9
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 1.2e-51 206.5 123 78.0
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 1.2e-51 206.5 122 77.9
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 2.1e-51 205.7 124 78.2
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 2.1e-51 205.7 136 72.1
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 7.9e-51 203.8 123 77.2
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 7.9e-51 203.8 123 76.4
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 7.9e-51 203.8 122 78.7
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 7.9e-51 203.8 122 78.7
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 1.3e-50 203.0 123 74.0
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 2.3e-50 202.2 124 77.4
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 2.3e-50 202.2 124 77.4
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 2.3e-50 202.2 124 76.6
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 5.1e-50 201.1 139 69.8
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 5.1e-50 201.1 124 75.8
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 4.3e-49 198.0 104 88.5
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 4.3e-49 198.0 105 85.7
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 9.7e-49 196.8 106 84.9
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 3.7e-48 194.9 107 82.2
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 4.8e-48 194.5 106 85.8
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 4.8e-48 194.5 106 85.8
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 4.8e-48 194.5 123 70.7
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 4.8e-48 194.5 107 84.1
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 4.8e-48 194.5 118 74.6
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 6.3e-48 194.1 113 78.8
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 3.1e-47 191.8 105 81.9
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 3.1e-47 191.8 105 83.8
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 5.3e-47 191.0 106 81.1
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 9.0e-47 190.3 107 81.3
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 2.0e-46 189.1 131 70.2
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 1.0e-45 186.8 107 79.4
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 1.3e-45 186.4 106 78.3
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 1.3e-45 186.4 123 71.5
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 1.7e-45 186.0 107 79.4
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 8.5e-45 183.7 107 80.4
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 1.1e-44 183.3 119 72.3
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 3.2e-44 181.8 112 74.1
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 5.5e-44 181.0 104 77.9
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 2.1e-43 179.1 106 78.3
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 2.7e-43 178.7 104 76.9
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 2.7e-43 178.7 86 95.3
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 6.1e-43 177.6 106 77.4
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 3.3e-41 171.8 106 75.5
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 3.3e-41 171.8 106 75.5
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 3.3e-41 171.8 106 75.5
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 2.8e-40 168.7 123 68.3
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 2.6e-33 145.6 107 65.4
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 1.2e-30 136.7 111 54.1
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 2.2e-29 132.5 66 86.4
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 2.9e-29 132.1 123 55.3
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 3.2e-28 128.6 95 61.1
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 9.4e-28 127.1 109 52.3
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 5.7e-25 117.9 65 83.1
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 9.1e-23 110.5 57 89.5
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 1.2e-22 110.2 69 75.4
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 1.0e-21 107.1 70 72.9
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 4.8e-16 88.2 77 51.9
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 4.5e-14 81.6 50 62.0
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 1.0e-13 80.5 44 75.0
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 1.8e-10 69.7 50 68.0


User provided reference genes

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