Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 0.0e+00 1099.7 552 100.0
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.7e-244 848.6 513 83.0
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.0e-239 832.4 514 80.9
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.5e-234 816.2 559 74.2
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 3.0e-227 792.0 538 74.2
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 5.2e-227 791.2 519 76.7
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 2.0e-226 789.3 518 76.1
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 3.3e-226 788.5 559 70.7
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 1.7e-225 786.2 542 72.0
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 8.2e-225 783.9 504 76.8
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.1e-224 783.5 543 73.1
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.4e-224 782.3 538 73.8
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 7.0e-224 780.8 532 73.1
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 5.9e-223 777.7 511 75.9
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 1.0e-222 776.9 537 72.4
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.0e-222 776.9 551 69.7
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.7e-222 776.2 556 69.4
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.7e-222 776.2 511 73.8
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 2.2e-222 775.8 537 72.1
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 5.0e-222 774.6 556 69.8
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 3.2e-221 771.9 564 69.5
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 3.2e-221 771.9 543 70.9
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 5.5e-221 771.2 540 71.3
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.7e-220 768.8 516 73.1
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 3.6e-220 768.5 507 75.1
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 4.7e-220 768.1 519 73.2
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 8.0e-220 767.3 515 74.4
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 8.0e-220 767.3 543 71.3
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 1.8e-219 766.1 556 70.0
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 1.8e-219 766.1 504 76.0
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 2.3e-219 765.8 542 72.5
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 2.3e-219 765.8 533 72.2
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 6.8e-219 764.2 544 71.3
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 1.2e-218 763.5 534 72.1
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 4.4e-218 761.5 534 71.9
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 9.8e-218 760.4 517 73.9
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 3.7e-217 758.4 565 68.8
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 6.3e-217 757.7 514 72.4
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 1.4e-216 756.5 486 76.5
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 4.1e-216 755.0 505 74.5
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 2.0e-215 752.7 510 73.5
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 3.5e-215 751.9 547 69.5
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 4.5e-215 751.5 507 73.4
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 5.9e-215 751.1 530 70.6
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 1.0e-214 750.4 501 73.7
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.7e-214 749.6 507 72.8
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 1.7e-214 749.6 505 75.0
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.7e-214 749.6 528 71.2
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 2.2e-214 749.2 558 67.9
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 2.2e-214 749.2 503 75.1
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 2.2e-214 749.2 566 67.1
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 2.9e-214 748.8 512 73.6
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 2.9e-214 748.8 508 74.0
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 3.8e-214 748.4 513 73.7
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 3.8e-214 748.4 463 77.5
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 5.0e-214 748.0 509 73.1
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 6.5e-214 747.7 544 70.8
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 6.5e-214 747.7 540 69.1
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 8.5e-214 747.3 513 73.5
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 8.5e-214 747.3 535 69.3
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 1.1e-213 746.9 511 72.8
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 1.1e-213 746.9 557 67.5
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.1e-213 746.9 524 71.4
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 3.2e-213 745.3 566 66.8
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 3.2e-213 745.3 549 69.4
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 1.2e-212 743.4 497 74.8
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.2e-212 743.4 513 73.1
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 1.2e-212 743.4 515 73.2
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 2.1e-212 742.7 522 70.7
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 2.1e-212 742.7 533 70.4
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 2.7e-212 742.3 561 66.0
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 8.0e-212 740.7 542 68.5
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 1.0e-211 740.3 526 69.8
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.0e-211 740.3 551 67.3
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 1.4e-211 740.0 524 70.2
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 4.0e-211 738.4 556 66.4
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 6.8e-211 737.6 506 71.9
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.8e-211 737.6 477 75.5
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 8.8e-211 737.3 534 69.5
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 1.2e-210 736.9 454 78.6
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 1.1e-208 730.3 508 72.2
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.1e-208 730.3 488 73.8
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 1.4e-208 729.9 502 71.5
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 1.8e-208 729.6 491 73.7
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 1.7e-206 723.0 472 75.8
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 3.8e-206 721.8 496 71.8
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 1.1e-205 720.3 479 74.3
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 1.5e-205 719.9 554 67.1
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 2.5e-205 719.2 646 60.4
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 2.8e-204 715.7 447 77.4
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.8e-203 713.0 476 73.5
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 1.8e-203 713.0 507 70.4
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 2.3e-203 712.6 427 79.4
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 8.9e-203 710.7 516 69.0
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 5.7e-202 708.0 455 76.0
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 4.1e-200 701.8 498 69.5
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 1.2e-183 647.1 518 66.0
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 8.9e-179 630.9 371 81.9
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 5.8e-178 628.2 520 60.6
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 1.8e-171 606.7 414 71.3
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 2.4e-168 596.3 422 73.0
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 5.3e-163 578.6 386 76.4
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.1e-157 560.8 460 60.7
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.0e-150 537.7 397 68.3
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 1.0e-150 537.7 496 54.8
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 6.5e-145 518.5 435 58.4
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.0e-134 484.6 472 53.0
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 3.3e-117 426.4 435 50.8
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 3.6e-111 406.4 526 47.7
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 8.0e-111 405.2 570 41.9
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 2.8e-108 396.7 450 50.7
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 4.8e-108 396.0 474 48.7
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 1.1e-107 394.8 453 50.1
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 9.4e-104 381.7 481 44.5
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 1.2e-103 381.3 442 49.3
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.8e-100 369.4 549 45.0
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.1e-96 358.2 255 71.0
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.0e-94 351.7 546 43.6
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 3.3e-80 303.5 481 38.9
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 6.8e-78 295.8 176 79.0
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 8.1e-71 272.3 169 78.1
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 2.2e-52 211.1 207 56.5
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 1.4e-43 181.8 162 58.6
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 5.1e-41 173.3 138 63.8
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.8e-36 157.1 129 60.5
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.6e-31 141.7 83 80.7
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 2.0e-29 134.8 105 62.9
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 5.1e-25 120.2 125 48.8
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 6.3e-23 113.2 104 59.6
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.7e-17 93.2 58 79.3
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 3.4e-13 80.9 124 46.0
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 3.8e-12 77.4 137 40.9
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 3.6e-10 70.9 101 39.6
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 2.3e-09 68.2 77 50.6
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 2.3e-09 68.2 116 42.2
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 5.3e-06 57.0 38 68.4


User provided reference genes

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