Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21645 Beta vulgaris HOM05D009695 ORTHO05D007271 1.8e-50 202.2 99 100.0
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.0e-29 133.3 91 71.4
Ah.01g018870 Amaranthus hybridus HOM05D009695 ORTHO05D007271 1.2e-20 103.2 98 59.2
Cpa.g.sc53.122 Carica papaya HOM05D009695 ORTHO05D007271 2.4e-10 68.9 98 44.9
CiPaw.02G172600 Carya illinoinensis HOM05D019773 ORTHO05D007271 2.4e-10 68.9 104 43.3
BcaB01g00155 Brassica carinata HOM05D009695 ORTHO05D007271 7.1e-10 67.4 93 43.0
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 7.1e-10 67.4 86 43.0
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 1.6e-09 66.2 101 41.6
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 2.1e-09 65.9 95 43.2
DCAR_019088 Daucus carota HOM05D009695 ORTHO05D007271 2.7e-09 65.5 102 39.2
Manes.07G095300 Manihot esculenta HOM05D009695 ORTHO05D007271 2.7e-09 65.5 97 44.3
CiPaw.01G269700 Carya illinoinensis HOM05D007861 ORTHO05D007271 7.8e-09 63.9 101 40.6
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 7.8e-09 63.9 97 39.2
Rhsim03G0116500 Rhododendron simsii HOM05D009695 ORTHO05D007271 7.8e-09 63.9 77 44.2
BcaC07g39776 Brassica carinata HOM05D009695 ORTHO05D007271 1.3e-08 63.2 102 39.2
C08p30020 Brassica napus HOM05D009695 ORTHO05D007271 1.3e-08 63.2 102 39.2
BolC8t50611H Brassica oleracea HOM05D009695 ORTHO05D007271 1.3e-08 63.2 102 39.2
Carub.0005s2144 Capsella rubella HOM05D009695 ORTHO05D007271 2.3e-08 62.4 105 40.0
Haze_16853 Corylus avellana HOM05D009695 ORTHO05D007271 2.3e-08 62.4 94 43.6
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 5.1e-08 61.2 94 38.3
MBI18_g25264_MAGBIO Magnolia biondii HOM05D022601 ORTHO05D023448 6.6e-08 60.8 100 40.0
Potri.010G226200 Populus trichocarpa HOM05D007861 ORTHO05D007271 6.6e-08 60.8 95 41.1
FAN06G4130 Fragaria x ananassa HOM05D019773 ORTHO05D007271 8.6e-08 60.5 98 37.8
A09p47770 Brassica napus HOM05D009695 ORTHO05D007271 1.1e-07 60.1 95 42.1
Sabra10G0174600 Salix brachista HOM05D007861 ORTHO05D007271 1.1e-07 60.1 94 39.4
Ciclev10033954m.g Citrus clementina HOM05D007861 ORTHO05D007271 1.9e-07 59.3 98 38.8
BolC4t25308H Brassica oleracea HOM05D000064 ORTHO05D006783 2.5e-07 58.9 81 43.2
Prupe.2G209700 Prunus persica HOM05D019773 ORTHO05D007271 3.3e-07 58.5 101 35.6
Sed0017526 Sechium edule HOM05D007861 ORTHO05D007271 4.3e-07 58.2 100 35.0
Prupe.6G107700 Prunus persica HOM05D007861 ORTHO05D007271 9.5e-07 57.0 84 38.1
RcHm_v2.0_Chr1g0362761 Rosa chinensis HOM05D019773 ORTHO05D007271 1.2e-06 56.6 94 37.2
COL.COLO4_10198 Corchorus olitorius HOM05D009695 ORTHO05D007271 1.6e-06 56.2 73 39.7
QL08p054789 Quercus lobata HOM05D009695 ORTHO05D007271 1.6e-06 56.2 104 35.6
TPR.G10289 Trifolium pratense HOM05D007861 ORTHO05D007271 1.6e-06 56.2 98 39.8
AL5G35930 Arabidopsis lyrata HOM05D009695 ORTHO05D007271 2.1e-06 55.8 92 41.3
CARHR164810 Cardamine hirsuta HOM05D009695 ORTHO05D007271 2.1e-06 55.8 93 35.5
C04p37450 Brassica napus HOM05D000064 ORTHO05D006783 2.8e-06 55.5 67 46.3
Psat6g181720 Pisum sativum HOM05D007861 ORTHO05D007271 2.8e-06 55.5 71 40.8
BraA09t40235Z Brassica rapa HOM05D000215 ORTHO05D001676 3.6e-06 55.1 90 42.2
Cfa001682 Carpinus fangiana HOM05D009695 ORTHO05D007271 4.7e-06 54.7 96 39.6
FAN03G2059 Fragaria x ananassa HOM05D019773 ORTHO05D007271 6.2e-06 54.3 93 37.6
FAN10G2337 Fragaria x ananassa HOM05D019773 ORTHO05D007271 6.2e-06 54.3 93 37.6
MELO3C026916.2 Cucumis melo HOM05D007861 ORTHO05D007271 8.1e-06 53.9 98 35.7
Thhalv10011102m.g Eutrema salsugineum HOM05D009695 ORTHO05D007271 8.1e-06 53.9 76 39.5
Medtr1g094250 Medicago truncatula HOM05D007861 ORTHO05D007271 8.1e-06 53.9 96 36.5


User provided reference genes

Program Settings