Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 5.4e-44 180.6 94 100.0
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 5.1e-34 147.5 94 79.8
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 5.1e-34 147.5 94 79.8
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 2.6e-30 135.2 94 78.7
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 1.3e-24 116.3 95 66.3
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 4.8e-24 114.4 96 65.6
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.4e-23 112.8 94 64.9
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.8e-23 112.5 94 66.0
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 2.4e-23 112.1 94 67.0
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 2.4e-23 112.1 94 67.0
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 5.3e-23 110.9 94 60.6
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 6.9e-23 110.5 94 62.8
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 1.5e-22 109.4 94 64.9
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 1.5e-22 109.4 94 64.9
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.5e-22 109.4 95 63.2
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 2.0e-22 109.0 96 62.5
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.0e-22 109.0 92 62.0
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 3.4e-22 108.2 101 62.4
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 7.6e-22 107.1 94 61.7
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 7.6e-22 107.1 94 61.7
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 1.0e-21 106.7 94 63.8
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 1.3e-21 106.3 96 61.5
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 1.3e-21 106.3 99 59.6
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.3e-21 106.3 94 62.8
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 1.7e-21 105.9 96 60.4
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.7e-21 105.9 94 62.8
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.2e-21 105.5 94 62.8
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.9e-21 105.1 92 60.9
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 3.8e-21 104.8 95 62.1
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 4.9e-21 104.4 95 61.1
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 6.5e-21 104.0 69 73.9
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 6.5e-21 104.0 94 60.6
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 6.5e-21 104.0 94 61.7
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 1.1e-20 103.2 99 58.6
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.1e-20 103.2 94 61.7
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 1.1e-20 103.2 100 58.0
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.4e-20 102.8 94 63.8
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.9e-20 102.4 93 58.1
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.9e-20 102.4 92 59.8
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 2.5e-20 102.1 94 58.5
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 2.5e-20 102.1 92 62.0
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 2.5e-20 102.1 91 60.4
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.5e-20 102.1 92 59.8
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 2.5e-20 102.1 94 58.5
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 3.2e-20 101.7 99 56.6
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 4.2e-20 101.3 100 61.0
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 4.2e-20 101.3 100 56.0
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 4.2e-20 101.3 99 56.6
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 4.2e-20 101.3 104 59.6
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 5.5e-20 100.9 92 60.9
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.5e-20 100.9 92 60.9
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 7.1e-20 100.5 96 61.5
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 7.1e-20 100.5 92 59.8
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 7.1e-20 100.5 99 59.6
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 7.1e-20 100.5 92 62.0
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 7.1e-20 100.5 69 71.0
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 9.3e-20 100.1 96 61.5
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 9.3e-20 100.1 96 61.5
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 9.3e-20 100.1 94 61.7
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 9.3e-20 100.1 54 85.2
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 9.3e-20 100.1 54 85.2
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 9.3e-20 100.1 67 71.6
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.6e-19 99.4 94 60.6
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.6e-19 99.4 71 69.0
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 2.1e-19 99.0 93 57.0
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 2.7e-19 98.6 88 59.1
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 2.7e-19 98.6 94 57.4
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 3.5e-19 98.2 93 60.2
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 3.5e-19 98.2 54 85.2
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 3.5e-19 98.2 53 84.9
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 4.6e-19 97.8 95 58.9
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 4.6e-19 97.8 95 58.9
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 4.6e-19 97.8 94 58.5
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 7.9e-19 97.1 94 59.6
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 1.0e-18 96.7 95 55.8
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.3e-18 96.3 55 81.8
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 1.3e-18 96.3 69 68.1
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.8e-18 95.9 91 59.3
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 2.3e-18 95.5 83 65.1
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 3.0e-18 95.1 94 54.3
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 5.1e-18 94.4 69 65.2
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 8.7e-18 93.6 64 67.2
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 1.1e-17 93.2 92 57.6
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.1e-17 93.2 94 54.3
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 1.9e-17 92.4 94 53.2
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 7.4e-17 90.5 83 65.1
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 3.7e-16 88.2 82 59.8
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 3.7e-16 88.2 82 61.0
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 3.7e-16 88.2 82 62.2
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.4e-15 86.3 86 61.6
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.4e-15 86.3 81 60.5
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 6.9e-15 84.0 104 51.9
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 9.0e-15 83.6 83 62.7
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 1.0e-13 80.1 79 58.2
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 2.2e-13 79.0 78 56.4
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.9e-12 75.9 41 85.4
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.9e-12 75.9 50 76.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 2.5e-12 75.5 84 52.4
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 2.5e-12 75.5 80 55.0
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 9.4e-12 73.6 59 66.1
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 9.4e-12 73.6 41 80.5
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 2.7e-11 72.0 47 74.5
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 2.7e-11 72.0 72 55.6
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 2.7e-11 72.0 77 53.2
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 4.6e-11 71.2 50 74.0
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 4.6e-11 71.2 64 54.7
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.0e-10 70.1 78 48.7
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 3.0e-10 68.6 77 46.8
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 5.1e-10 67.8 79 54.4
Pp3c2_9610 Physcomitrium patens HOM05D007135 ORTHO05D008880 4.8e-08 61.2 79 48.1
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.5e-06 56.2 37 78.4
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.5e-06 56.2 37 78.4
Mapoly0090s0033 Marchantia polymorpha HOM05D007135 ORTHO05D008880 7.7e-06 53.9 86 39.5


User provided reference genes

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