Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 6.3e-285 983.4 490 100.0
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.3e-217 758.4 437 86.3
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.4e-207 726.5 442 80.3
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.5e-198 696.4 423 79.2
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 8.4e-197 690.6 500 68.6
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.1e-196 690.3 452 75.2
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 7.1e-196 687.6 468 71.6
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 9.3e-196 687.2 456 74.3
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 6.0e-195 684.5 475 71.6
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 7.9e-195 684.1 445 74.6
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.0e-194 683.7 439 76.1
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 3.9e-194 681.8 479 70.8
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 1.1e-193 680.2 479 69.7
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.6e-192 676.4 479 70.8
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 2.1e-192 676.0 453 73.5
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.8e-192 675.6 452 73.5
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 2.8e-192 675.6 455 73.4
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 4.8e-192 674.9 433 75.8
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.1e-191 673.7 445 74.2
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.4e-191 673.3 493 69.4
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.4e-191 672.5 452 72.8
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.1e-191 672.2 491 72.5
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 3.1e-191 672.2 448 74.3
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 4.0e-191 671.8 423 76.6
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 5.3e-191 671.4 423 77.1
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 6.9e-191 671.0 425 76.5
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 3.4e-190 668.7 466 72.1
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 7.6e-190 667.5 452 71.2
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 7.6e-190 667.5 463 70.8
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.0e-189 667.2 455 73.6
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.3e-189 666.8 475 70.9
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 2.2e-189 666.0 498 69.1
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.9e-189 665.6 457 72.0
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 1.4e-188 663.3 463 70.8
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 2.5e-188 662.5 428 75.2
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 2.5e-188 662.5 421 76.0
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 3.2e-188 662.1 457 72.2
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 5.5e-188 661.4 422 75.6
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 7.1e-188 661.0 455 72.1
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 7.1e-188 661.0 446 72.4
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.6e-187 659.8 424 75.0
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.0e-186 657.1 424 75.2
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 3.0e-186 655.6 423 74.7
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 5.1e-186 654.8 465 69.9
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 6.7e-186 654.4 422 75.1
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 2.5e-185 652.5 479 69.1
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 4.3e-185 651.7 424 74.5
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 5.7e-185 651.4 458 69.9
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 8.2e-184 647.5 438 72.8
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 3.1e-183 645.6 425 73.2
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 6.9e-183 644.4 421 74.8
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.5e-182 643.3 476 67.4
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 5.9e-182 641.3 473 66.8
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 1.0e-181 640.6 473 66.6
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 1.7e-181 639.8 478 65.7
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 3.8e-181 638.6 487 66.1
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 5.0e-181 638.3 436 70.6
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 6.5e-181 637.9 477 65.8
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.4e-180 636.7 425 71.1
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 1.9e-180 636.3 477 65.6
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 5.5e-180 634.8 425 71.5
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 9.4e-180 634.0 488 65.8
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 8.8e-178 627.5 434 71.2
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 1.4e-175 620.2 467 66.4
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 2.4e-175 619.4 441 71.4
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 2.6e-174 615.9 449 68.2
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 3.4e-174 615.5 456 67.5
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 3.4e-174 615.5 384 77.3
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 7.7e-174 614.4 382 78.0
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 1.9e-172 609.8 482 65.6
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 4.2e-172 608.6 386 76.2
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 1.2e-171 607.1 385 76.4
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.4e-167 593.6 445 66.7
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 3.1e-167 592.4 384 73.7
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 1.5e-166 590.1 422 70.1
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.7e-165 586.6 386 73.6
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 3.8e-165 585.5 441 69.2
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 3.2e-164 582.4 380 72.9
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 1.2e-163 580.5 410 70.0
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.6e-161 572.8 439 65.6
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 8.2e-160 567.8 464 62.3
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 1.0e-157 560.8 407 68.1
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 8.0e-155 551.2 429 63.6
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 6.3e-152 541.6 344 77.0
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 3.5e-150 535.8 432 60.0
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.3e-149 533.9 434 59.4
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 9.4e-148 527.7 469 59.7
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 4.4e-145 518.8 353 71.1
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.1e-143 514.2 315 79.4
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 3.9e-133 479.2 328 69.8
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.2e-126 457.6 425 55.8
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 3.2e-119 433.0 461 49.7
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 3.9e-117 426.0 456 51.3
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 3.2e-103 379.8 246 73.6
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.2e-102 377.9 244 71.7
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 5.3e-98 362.5 439 46.0
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 3.5e-86 323.2 263 58.9
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 3.9e-85 319.7 293 59.7
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 1.5e-84 317.8 293 59.7
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.7e-80 304.3 204 69.1
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 1.9e-76 290.8 225 66.2
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 1.4e-66 258.1 213 63.4
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 2.7e-62 243.8 440 38.6
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.3e-60 236.5 179 63.7
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 4.8e-59 233.0 305 48.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 5.5e-55 219.5 186 59.1
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 1.3e-35 155.2 93 77.4
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.7e-35 153.7 116 61.2
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.2e-30 138.7 85 78.8
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.4e-29 135.2 89 73.0
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 5.0e-16 90.1 58 70.7
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 7.0e-10 69.7 42 73.8


User provided reference genes

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