Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 2.3e-34 148.3 71 100.0
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 7.0e-28 126.7 66 92.4
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.7e-27 124.8 67 88.1
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 7.8e-27 123.2 67 86.6
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 5.0e-26 120.6 67 88.1
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 8.6e-26 119.8 74 83.8
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 4.3e-25 117.5 76 77.6
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 7.3e-25 116.7 75 81.3
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 1.6e-24 115.5 75 80.0
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 2.8e-24 114.8 74 81.1
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 4.7e-24 114.0 74 78.4
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.4e-23 112.5 76 75.0
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.4e-23 112.5 74 78.4
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.8e-23 112.1 76 75.0
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 2.3e-23 111.7 74 73.0
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.3e-23 111.7 74 77.0
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.3e-23 111.7 74 77.0
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.3e-23 111.7 74 77.0
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 2.3e-23 111.7 74 77.0
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 2.3e-23 111.7 74 78.4
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 3.1e-23 111.3 74 75.7
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 4.0e-23 110.9 72 75.0
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 4.0e-23 110.9 76 73.7
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 4.0e-23 110.9 76 73.7
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 5.2e-23 110.5 74 78.4
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 5.2e-23 110.5 74 78.4
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.8e-23 110.2 76 73.7
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 8.9e-23 109.8 73 74.0
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 8.9e-23 109.8 74 77.0
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 8.9e-23 109.8 78 70.5
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 1.2e-22 109.4 72 76.4
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.2e-22 109.4 74 74.3
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.2e-22 109.4 72 75.0
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.5e-22 109.0 67 80.6
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.5e-22 109.0 74 74.3
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.5e-22 109.0 74 75.7
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.5e-22 109.0 73 76.7
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.5e-22 109.0 73 74.0
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 2.0e-22 108.6 72 73.6
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 2.0e-22 108.6 72 73.6
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 2.0e-22 108.6 74 75.7
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 2.0e-22 108.6 73 72.6
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 2.0e-22 108.6 73 72.6
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 2.6e-22 108.2 72 73.6
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 3.4e-22 107.8 72 72.2
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 3.4e-22 107.8 76 72.4
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 3.4e-22 107.8 74 74.3
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 3.4e-22 107.8 74 75.7
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 3.4e-22 107.8 73 75.3
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 4.4e-22 107.5 75 73.3
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 4.4e-22 107.5 72 72.2
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 4.4e-22 107.5 73 74.0
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 5.8e-22 107.1 72 72.2
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 5.8e-22 107.1 72 72.2
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 5.8e-22 107.1 74 71.6
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 7.5e-22 106.7 75 72.0
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 7.5e-22 106.7 75 72.0
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 7.5e-22 106.7 72 70.8
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 7.5e-22 106.7 72 70.8
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 7.5e-22 106.7 72 70.8
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 7.5e-22 106.7 74 74.3
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 7.5e-22 106.7 74 73.0
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 7.5e-22 106.7 76 71.1
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 9.8e-22 106.3 72 72.2
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 9.8e-22 106.3 67 74.6
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 9.8e-22 106.3 75 70.7
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 9.8e-22 106.3 75 69.3
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 1.3e-21 105.9 72 73.6
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 1.3e-21 105.9 75 72.0
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.3e-21 105.9 75 73.3
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 1.7e-21 105.5 72 70.8
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 1.7e-21 105.5 75 72.0
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.7e-21 105.5 74 68.9
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 1.7e-21 105.5 74 73.0
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 2.2e-21 105.1 74 73.0
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 2.2e-21 105.1 73 71.2
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 2.2e-21 105.1 74 73.0
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 2.9e-21 104.8 71 70.4
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 3.7e-21 104.4 76 68.4
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 3.7e-21 104.4 73 72.6
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 4.9e-21 104.0 72 70.8
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 4.9e-21 104.0 72 70.8
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 4.9e-21 104.0 74 68.9
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 4.9e-21 104.0 75 70.7
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 6.4e-21 103.6 72 69.4
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 6.4e-21 103.6 74 70.3
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 8.3e-21 103.2 71 70.4
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 8.3e-21 103.2 76 69.7
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 8.3e-21 103.2 73 71.2
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.3e-21 103.2 76 69.7
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.3e-21 103.2 76 69.7
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 8.3e-21 103.2 74 70.3
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 8.3e-21 103.2 74 70.3
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 8.3e-21 103.2 75 69.3
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.1e-20 102.8 75 72.0
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 1.4e-20 102.4 74 67.6
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 1.9e-20 102.1 72 69.4
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 1.9e-20 102.1 73 69.9
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 2.4e-20 101.7 69 76.8
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 2.4e-20 101.7 74 70.3
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 2.4e-20 101.7 74 71.6
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.4e-20 101.7 75 69.3
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 3.2e-20 101.3 74 70.3
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 3.2e-20 101.3 73 69.9
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 4.1e-20 100.9 77 67.5
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 5.4e-20 100.5 74 70.3
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 5.4e-20 100.5 75 65.3
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 7.0e-20 100.1 75 68.0
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 7.0e-20 100.1 75 66.7
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 2.1e-19 98.6 75 68.0
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.1e-19 98.6 75 65.3
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 6.0e-19 97.1 73 65.8
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.3e-18 95.9 75 65.3
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 3.3e-17 91.3 75 61.3
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.3e-17 90.9 71 63.4
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 9.5e-17 89.7 68 61.8
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 3.6e-16 87.8 83 56.6
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 4.7e-16 87.4 75 64.0
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 3.5e-11 71.2 39 87.2
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.2e-06 56.2 86 39.5


User provided reference genes

Program Settings