Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.2e-106 389.8 198 100.0
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.4e-56 222.2 140 84.3
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.4e-56 222.2 140 84.3
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 6.5e-47 191.4 134 77.6
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.5e-43 180.3 134 72.4
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 4.3e-43 178.7 147 68.0
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 6.9e-41 171.4 140 67.9
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 3.4e-40 169.1 143 69.2
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 5.9e-40 168.3 134 64.2
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 5.9e-40 168.3 149 65.8
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.3e-39 167.2 142 66.2
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.7e-39 166.8 136 66.9
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.2e-39 166.4 137 66.4
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 2.2e-39 166.4 146 65.1
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 3.8e-39 165.6 137 66.4
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 6.5e-39 164.9 149 64.4
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 8.5e-39 164.5 141 66.0
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.1e-38 164.1 146 61.6
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 1.1e-38 164.1 143 64.3
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 4.2e-38 162.2 151 61.6
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 5.5e-38 161.8 144 61.8
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 7.2e-38 161.4 152 61.2
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 9.4e-38 161.0 141 64.5
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 9.4e-38 161.0 142 64.1
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 9.4e-38 161.0 141 63.8
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 9.4e-38 161.0 141 63.8
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.6e-37 160.2 138 65.2
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.6e-37 160.2 142 62.7
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 2.1e-37 159.8 147 62.6
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 3.6e-37 159.1 146 61.6
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 6.1e-37 158.3 141 63.1
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.4e-36 157.1 139 64.7
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.8e-36 156.8 143 62.2
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.8e-36 156.8 135 63.7
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 2.3e-36 156.4 152 60.5
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 3.0e-36 156.0 139 63.3
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 5.1e-36 155.2 151 60.3
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 6.7e-36 154.8 143 60.1
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.7e-36 154.8 135 63.7
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 6.7e-36 154.8 134 61.9
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 6.7e-36 154.8 145 59.3
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 6.7e-36 154.8 134 64.9
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 6.7e-36 154.8 143 60.8
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 6.7e-36 154.8 143 60.8
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 8.8e-36 154.5 134 62.7
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 8.8e-36 154.5 134 64.2
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 8.8e-36 154.5 134 64.2
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.1e-35 154.1 137 65.0
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.5e-35 153.7 124 68.5
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 2.0e-35 153.3 156 59.6
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.0e-35 153.3 135 64.4
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 2.0e-35 153.3 148 61.5
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 2.0e-35 153.3 134 60.4
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 2.6e-35 152.9 138 63.8
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 3.3e-35 152.5 134 61.9
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 4.4e-35 152.1 134 64.2
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 5.7e-35 151.8 133 60.9
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 5.7e-35 151.8 134 61.2
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 7.4e-35 151.4 134 61.9
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 9.7e-35 151.0 134 59.7
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.3e-34 150.6 148 58.1
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 1.3e-34 150.6 155 56.1
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 1.3e-34 150.6 135 63.0
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 1.3e-34 150.6 150 58.0
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 1.7e-34 150.2 134 61.2
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 1.7e-34 150.2 136 58.1
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.2e-34 149.8 135 62.2
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 2.2e-34 149.8 135 62.2
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 2.8e-34 149.4 153 56.9
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.8e-34 149.4 144 59.7
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 4.8e-34 148.7 137 62.0
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 4.8e-34 148.7 139 61.2
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 4.8e-34 148.7 135 60.0
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 4.8e-34 148.7 131 64.9
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 6.3e-34 148.3 150 58.0
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 8.2e-34 147.9 143 58.0
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 8.2e-34 147.9 143 58.0
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 1.4e-33 147.1 134 58.2
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 2.4e-33 146.4 134 59.7
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 4.1e-33 145.6 134 61.2
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 7.0e-33 144.8 136 58.8
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 7.0e-33 144.8 136 57.4
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.2e-32 144.1 123 66.7
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.6e-32 143.7 123 65.0
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 2.0e-32 143.3 145 57.2
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.6e-32 142.9 146 58.9
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 4.5e-32 142.1 134 57.5
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 5.9e-32 141.7 155 53.5
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 7.7e-32 141.4 136 58.8
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.1e-30 137.5 136 56.6
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.5e-30 137.1 137 62.8
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 7.2e-30 134.8 148 52.0
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.2e-29 134.0 132 53.8
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 2.1e-29 133.3 135 54.8
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 1.4e-28 130.6 147 53.7
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.8e-28 130.2 133 52.6
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 2.3e-28 129.8 133 54.1
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 2.3e-28 129.8 133 54.1
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 5.2e-28 128.6 135 54.1
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 8.8e-28 127.9 137 56.2
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 8.8e-28 127.9 133 54.1
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 4.4e-27 125.6 133 54.9
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 3.7e-26 122.5 131 51.9
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 4.8e-26 122.1 131 56.5
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 4.8e-26 122.1 131 56.5
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 4.8e-26 122.1 131 56.5
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 4.8e-26 122.1 131 56.5
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 4.8e-26 122.1 149 51.7
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 5.3e-25 118.6 129 52.7
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 7.0e-25 118.2 135 48.9
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 7.7e-24 114.8 134 47.0
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 5.0e-23 112.1 149 49.0
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 6.5e-23 111.7 139 45.3
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 1.9e-22 110.2 117 53.8
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 2.7e-21 106.3 145 46.2
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 3.6e-21 105.9 127 50.4
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 1.8e-20 103.6 146 45.2
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.2e-19 100.9 113 48.7
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 5.7e-19 98.6 112 52.7
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 6.3e-18 95.1 126 49.2
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.1e-17 94.4 132 40.9
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 1.7e-15 87.0 133 42.1
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 2.7e-13 79.7 81 53.1
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 2.0e-11 73.6 64 62.5
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 4.4e-11 72.4 63 63.5
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.3e-10 70.9 100 42.0
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 2.2e-10 70.1 133 35.3
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.6e-08 63.9 64 54.7
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 1.6e-08 63.9 44 72.7
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 5.9e-08 62.0 46 56.5
Cre01.g031250 Chlamydomonas reinhardtii HOM05D006047 ORTHO05D007353 8.6e-07 58.2 133 33.1
Zm00001eb181930 Zea mays HOM05D001107 ORTHO05D007353 2.5e-06 56.6 44 70.5
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 5.6e-06 55.5 132 31.8
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 5.6e-06 55.5 132 31.8
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 5.6e-06 55.5 132 31.8
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 5.6e-06 55.5 132 31.8
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 5.6e-06 55.5 132 31.8
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 7.3e-06 55.1 132 31.8


User provided reference genes

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