Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 1.8e-90 335.9 172 100.0
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 6.7e-48 194.5 162 67.9
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 8.2e-30 134.4 121 69.4
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 4.5e-28 128.6 147 50.3
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 5.9e-28 128.3 121 55.4
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.9e-27 125.9 123 53.7
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 2.9e-27 125.9 123 53.7
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 2.9e-27 125.9 151 55.6
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 2.9e-27 125.9 125 53.6
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 2.9e-27 125.9 128 54.7
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 8.5e-27 124.4 137 50.4
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 2.5e-26 122.9 151 46.4
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 2.5e-26 122.9 145 50.3
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 2.5e-26 122.9 120 54.2
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 2.5e-26 122.9 136 51.5
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 3.2e-26 122.5 123 53.7
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 3.2e-26 122.5 123 53.7
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 3.2e-26 122.5 125 55.2
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 4.2e-26 122.1 122 57.4
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 5.5e-26 121.7 120 51.7
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 7.2e-26 121.3 120 51.7
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 9.3e-26 120.9 145 49.7
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 9.3e-26 120.9 120 58.3
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 9.3e-26 120.9 142 52.1
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 1.6e-25 120.2 133 50.4
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.6e-25 120.2 124 55.6
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 1.6e-25 120.2 152 46.1
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 2.1e-25 119.8 124 54.0
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 4.6e-25 118.6 123 52.8
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 4.6e-25 118.6 124 58.1
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 7.9e-25 117.9 129 51.2
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 1.3e-24 117.1 130 51.5
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 1.3e-24 117.1 144 53.5
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 1.3e-24 117.1 125 48.0
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 3.0e-24 115.9 120 53.3
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 3.0e-24 115.9 123 55.3
Ah.01g023270 Amaranthus hybridus HOM05D003374 ORTHO05D009470 3.9e-24 115.5 148 48.6
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 5.1e-24 115.2 128 53.1
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 6.7e-24 114.8 94 60.6
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 1.9e-23 113.2 139 46.8
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 1.9e-23 113.2 139 46.8
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 1.9e-23 113.2 124 48.4
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 3.3e-23 112.5 128 47.7
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 3.3e-23 112.5 120 51.7
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 5.7e-23 111.7 142 47.2
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 5.7e-23 111.7 128 49.2
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 7.4e-23 111.3 111 53.2
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 9.7e-23 110.9 121 49.6
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.3e-22 110.5 129 49.6
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 1.3e-22 110.5 118 52.5
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 1.3e-22 110.5 121 52.9
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 1.7e-22 110.2 152 42.8
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.7e-22 110.2 107 55.1
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 1.7e-22 110.2 121 50.4
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 2.2e-22 109.8 115 56.5
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 2.2e-22 109.8 124 51.6
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.8e-22 109.4 136 47.8
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 3.7e-22 109.0 120 52.5
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 6.3e-22 108.2 135 46.7
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 6.3e-22 108.2 162 40.7
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 1.1e-21 107.5 152 42.1
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 1.4e-21 107.1 169 42.0
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 1.8e-21 106.7 109 56.0
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 1.8e-21 106.7 143 47.6
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 2.4e-21 106.3 103 57.3
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 2.4e-21 106.3 136 44.9
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 4.1e-21 105.5 118 47.5
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 4.1e-21 105.5 135 43.0
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 4.1e-21 105.5 120 48.3
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 1.2e-20 104.0 152 42.1
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 2.0e-20 103.2 136 44.1
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 2.0e-20 103.2 164 40.2
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 2.0e-20 103.2 105 55.2
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 2.6e-20 102.8 131 46.6
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 4.5e-20 102.1 136 44.1
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 1.0e-19 100.9 131 46.6
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 5.0e-19 98.6 132 43.9
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 6.5e-19 98.2 132 43.2
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 6.5e-19 98.2 132 43.2
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 6.5e-19 98.2 136 43.4
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 6.5e-19 98.2 136 43.4
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 6.5e-19 98.2 136 43.4
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 1.1e-18 97.4 142 44.4
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 1.9e-18 96.7 136 44.1
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 1.9e-18 96.7 136 44.1
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 7.2e-18 94.7 132 45.5
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 9.4e-18 94.4 104 57.7
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 1.2e-17 94.0 97 55.7
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 1.6e-17 93.6 121 43.8
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 1.6e-17 93.6 100 48.0
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 3.6e-17 92.4 133 40.6
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 4.7e-17 92.0 100 48.0
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 6.1e-17 91.7 103 50.5
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 3.1e-13 79.3 93 44.1
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 5.0e-11 72.0 82 51.2
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 2.5e-10 69.7 82 50.0
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 7.2e-10 68.2 86 46.5
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 7.2e-10 68.2 86 46.5
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 1.2e-09 67.4 60 56.7
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 2.7e-09 66.2 82 45.1
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 2.7e-09 66.2 98 41.8
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 2.3e-08 63.2 82 47.6
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 7.4e-07 58.2 68 48.5
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 1.3e-06 57.4 84 41.7


User provided reference genes

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