Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 3.0e-291 1004.6 554 100.0
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 1.8e-38 164.9 460 36.5
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 2.2e-23 114.8 286 37.4
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 3.2e-19 100.9 305 34.1
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 1.7e-15 88.6 441 31.7
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 4.8e-15 87.0 412 27.9
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 8.2e-15 86.3 476 29.6
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.4e-14 85.5 327 32.7
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.4e-14 85.5 483 26.7
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 7.0e-14 83.2 258 34.1
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 7.0e-14 83.2 275 33.1
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 9.1e-14 82.8 432 27.1
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 9.1e-14 82.8 249 31.7
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.2e-13 82.4 473 26.6
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 1.5e-13 82.0 254 32.3
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 2.0e-13 81.6 236 33.5
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 4.5e-13 80.5 257 35.0
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.0e-12 79.3 264 32.6
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 1.7e-12 78.6 261 31.0
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 2.2e-12 78.2 465 26.0
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 3.8e-12 77.4 250 34.4
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 8.5e-12 76.3 243 32.9
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 8.5e-12 76.3 243 31.7
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 1.5e-11 75.5 259 32.4
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 1.9e-11 75.1 254 31.1
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.9e-11 75.1 465 25.8
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 2.5e-11 74.7 457 25.6
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 2.5e-11 74.7 474 30.0
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 3.2e-11 74.3 426 25.1
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 3.2e-11 74.3 248 31.5
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 1.2e-10 72.4 244 35.2
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 1.2e-10 72.4 254 33.9
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 2.7e-10 71.2 426 24.9
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 6.1e-10 70.1 325 27.4
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 1.4e-09 68.9 301 26.9
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 2.3e-09 68.2 126 36.5
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 2.3e-09 68.2 307 27.0
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 4.0e-09 67.4 127 38.6
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 8.8e-09 66.2 166 41.0
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 8.8e-09 66.2 286 27.6
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 1.1e-08 65.9 101 47.5
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 1.1e-08 65.9 180 34.4
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 1.1e-08 65.9 155 35.5
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 1.5e-08 65.5 137 38.7
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 2.0e-08 65.1 137 35.8
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.0e-08 65.1 160 35.6
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 2.6e-08 64.7 166 38.0
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 3.3e-08 64.3 209 34.0
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 3.3e-08 64.3 157 35.7
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 4.4e-08 63.9 176 32.4
Aqoxy1G02121 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 7.5e-08 63.2 186 44.1
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 1.3e-07 62.4 258 38.4
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 1.7e-07 62.0 135 38.5
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 1.7e-07 62.0 180 33.3
CDE02G2770 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 2.8e-07 61.2 169 33.7
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 6.3e-07 60.1 187 30.5
ECA232G2142 Erigeron canadensis HOM05D008208 ORTHO05D010143 1.1e-06 59.3 120 40.8
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 1.4e-06 58.9 207 40.6
CDE05G0720 Ceratophyllum demersum HOM05D008208 ORTHO05D010143 2.4e-06 58.2 146 35.6
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 9.1e-06 56.2 193 33.2


User provided reference genes

Program Settings