Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21122 Beta vulgaris HOM05D001690 ORTHO05D009096 1.6e-88 329.3 163 100.0
Hund05955 Selenicereus undatus HOM05D001690 ORTHO05D009096 1.3e-40 170.2 95 83.2
AUR62026581 Chenopodium quinoa HOM05D001690 ORTHO05D009096 1.7e-40 169.9 95 83.2
Hund25316 Selenicereus undatus HOM05D001690 ORTHO05D009096 2.2e-40 169.5 103 78.6
AUR62039406 Chenopodium quinoa HOM05D001690 ORTHO05D009096 2.8e-40 169.1 95 82.1
Ah.03g132370 Amaranthus hybridus HOM05D000337 ORTHO05D000297 4.1e-39 165.2 95 82.1
Thecc.02G242600 Theobroma cacao HOM05D001690 ORTHO05D009096 1.6e-38 163.3 103 77.7
COL.COLO4_37898 Corchorus olitorius HOM05D001690 ORTHO05D002627 3.5e-38 162.2 95 80.0
Duzib248G1036 Durio zibethinus HOM05D001690 ORTHO05D009096 3.5e-38 162.2 95 78.9
Gohir.A03G142400 Gossypium hirsutum HOM05D001690 ORTHO05D009096 3.5e-38 162.2 103 75.7
TWI36G1443 Tripterygium wilfordii HOM05D001690 ORTHO05D002627 3.5e-38 162.2 95 77.9
EL10Ac6g13729 Beta vulgaris HOM05D001690 ORTHO05D009096 1.0e-37 160.6 96 78.1
vmacro01197 Vaccinium macrocarpon HOM05D001690 ORTHO05D009096 3.8e-37 158.7 105 73.3
Sabra08G0111900 Salix brachista HOM05D001690 ORTHO05D009096 5.0e-37 158.3 95 75.8
Rhsim12G0050200 Rhododendron simsii HOM05D001690 ORTHO05D009096 6.5e-37 157.9 99 73.7
Manes.01G196800 Manihot esculenta HOM05D001690 ORTHO05D009096 8.5e-37 157.5 95 77.9
TAR629G0556 Trochodendron aralioides HOM05D001690 ORTHO05D009096 8.5e-37 157.5 103 73.8
Cfa009103 Carpinus fangiana HOM05D001690 ORTHO05D009096 1.1e-36 157.1 95 75.8
Haze_12139 Corylus avellana HOM05D001690 ORTHO05D009096 1.1e-36 157.1 95 76.8
CiPaw.06G074800 Carya illinoinensis HOM05D001690 ORTHO05D009096 1.5e-36 156.8 94 75.5
Gohir.D02G165700 Gossypium hirsutum HOM05D001690 ORTHO05D009096 1.5e-36 156.8 95 77.9
Gorai.005G185800 Gossypium raimondii HOM05D001690 ORTHO05D009096 1.5e-36 156.8 95 77.9
QL03p062480 Quercus lobata HOM05D001690 ORTHO05D009096 1.5e-36 156.8 95 72.6
Sc14g0008550 Simmondsia chinensis HOM05D001690 ORTHO05D009096 1.9e-36 156.4 95 77.9
TWI18G1158 Tripterygium wilfordii HOM05D001690 ORTHO05D002627 1.9e-36 156.4 94 75.5
Potri.008G147000 Populus trichocarpa HOM05D001690 ORTHO05D009096 4.2e-36 155.2 95 75.8
Atru.chr11.1963 Acer truncatum HOM05D001690 ORTHO05D009096 7.2e-36 154.5 95 74.7
Ciclev10033984m.g Citrus clementina HOM05D001690 ORTHO05D009096 7.2e-36 154.5 95 74.7
Dinv30998 Davidia involucrata HOM05D001690 ORTHO05D009096 9.4e-36 154.1 103 70.9
Dinv31105 Davidia involucrata HOM05D001690 ORTHO05D009096 9.4e-36 154.1 103 70.9
Peaxi162Scf00421g00710 Petunia axillaris HOM05D001690 ORTHO05D009096 1.2e-35 153.7 95 74.7
Cpa.g.sc5.350 Carica papaya HOM05D001690 ORTHO05D009096 2.7e-35 152.5 95 76.8
FvH4_4g35000 Fragaria vesca HOM05D001690 ORTHO05D009096 2.7e-35 152.5 95 73.7
FAN12G1851 Fragaria x ananassa HOM05D001690 ORTHO05D009096 2.7e-35 152.5 95 73.7
PGR119G1314 Punica granatum HOM05D001690 ORTHO05D009096 2.7e-35 152.5 95 70.5
Cc11_g14250 Coffea canephora HOM05D001690 ORTHO05D009096 3.6e-35 152.1 95 75.8
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 3.6e-35 152.1 95 74.7
RcHm_v2.0_Chr4g0444521 Rosa chinensis HOM05D001690 ORTHO05D009096 3.6e-35 152.1 95 71.6
CSS0041586 Camellia sinensis var. sinensis HOM05D001690 ORTHO05D009096 4.7e-35 151.8 103 72.8
FAN07G2318 Fragaria x ananassa HOM05D001690 ORTHO05D009096 4.7e-35 151.8 95 73.7
FAN22G0616 Fragaria x ananassa HOM05D001690 ORTHO05D009096 4.7e-35 151.8 95 73.7
GSVIVG01020171001 Vitis vinifera HOM05D001690 ORTHO05D009096 4.7e-35 151.8 103 72.8
Hma1.2p1_0160F.1_g070590 Hydrangea macrophylla HOM05D001690 ORTHO05D009096 6.1e-35 151.4 103 71.8
Aqoxy3G03080 Aquilegia oxysepala HOM05D001690 ORTHO05D009096 8.0e-35 151.0 103 68.9
Carub.0001s2353 Capsella rubella HOM05D001690 ORTHO05D009096 1.0e-34 150.6 95 72.6
Prupe.1G259700 Prunus persica HOM05D001690 ORTHO05D009096 1.4e-34 150.2 95 72.6
Aa31LG7G7870 Aethionema arabicum HOM05D001690 ORTHO05D009096 1.8e-34 149.8 96 68.8
CAN.G1160.1 Capsicum annuum HOM05D001690 ORTHO05D009096 1.8e-34 149.8 96 71.9
MD16G1087300 Malus domestica HOM05D001690 ORTHO05D009096 1.8e-34 149.8 95 69.5
AT1G24095 Arabidopsis thaliana HOM05D001690 ORTHO05D009096 2.3e-34 149.4 95 70.5
Lj3C1049G3 Lonicera japonica HOM05D001690 ORTHO05D009096 3.0e-34 149.1 103 68.0
MD13G1087000 Malus domestica HOM05D001690 ORTHO05D009096 3.0e-34 149.1 95 71.6
THA.LOC109116916 Tarenaya hassleriana HOM05D001690 ORTHO05D009096 3.0e-34 149.1 96 69.8
PGSC0003DMG400015577 Solanum tuberosum HOM05D001690 ORTHO05D009096 4.0e-34 148.7 96 70.8
FAN22G1692 Fragaria x ananassa HOM05D003615 ORTHO05D004858 5.2e-34 148.3 95 71.6
Sopen05g002120 Solanum pennellii HOM05D001690 ORTHO05D009096 6.8e-34 147.9 96 70.8
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 8.8e-34 147.5 96 69.8
CARHR024380 Cardamine hirsuta HOM05D001690 ORTHO05D009096 8.8e-34 147.5 95 69.5
Migut.L01445 Erythranthe guttata HOM05D001690 ORTHO05D009096 8.8e-34 147.5 103 68.9
AL1G37900 Arabidopsis lyrata HOM05D001690 ORTHO05D009096 1.2e-33 147.1 95 68.4
BcaB07g32380 Brassica carinata HOM05D001690 ORTHO05D009096 1.5e-33 146.7 95 68.4
BraA09t39574Z Brassica rapa HOM05D001690 ORTHO05D009096 2.0e-33 146.4 95 68.4
Lalb_Chr09g0326501 Lupinus albus HOM05D001690 ORTHO05D009096 2.0e-33 146.4 96 69.8
MBI14_g12607_MAGBIO Magnolia biondii HOM05D001690 ORTHO05D009096 2.0e-33 146.4 104 65.4
A09p40800 Brassica napus HOM05D001690 ORTHO05D009096 2.6e-33 146.0 95 68.4
C05p23190 Brassica napus HOM05D001690 ORTHO05D009096 2.6e-33 146.0 95 68.4
HanXRQChr04g0103621 Helianthus annuus HOM05D001690 ORTHO05D009096 2.6e-33 146.0 95 72.6
SalBow2G0686 Salvia bowleyana HOM05D001690 ORTHO05D009096 2.6e-33 146.0 103 66.0
SalBow2G2592 Salvia bowleyana HOM05D001690 ORTHO05D009096 2.6e-33 146.0 103 66.0
Lsat_1_v5_gn_4_6521 Lactuca sativa HOM05D001690 ORTHO05D009096 3.4e-33 145.6 95 72.6
DCAR_026553 Daucus carota HOM05D001690 ORTHO05D009096 4.4e-33 145.2 95 71.6
Actinidia08182 Actinidia chinensis HOM05D001690 ORTHO05D009096 5.7e-33 144.8 95 71.6
BcaC05g26303 Brassica carinata HOM05D001690 ORTHO05D009096 5.7e-33 144.8 95 67.4
BolC5t31021H Brassica oleracea HOM05D001690 ORTHO05D009096 5.7e-33 144.8 95 67.4
CsaV3_5G031860 Cucumis sativus L. HOM05D001690 ORTHO05D009096 5.7e-33 144.8 95 70.5
Thhalv10008745m.g Eutrema salsugineum HOM05D001690 ORTHO05D009096 9.8e-33 144.1 95 66.3
SGA_v2.0_scaffold8G04246 Striga asiatica HOM05D001690 ORTHO05D009096 9.8e-33 144.1 99 66.7
Sp1g21410 Schrenkiella parvula HOM05D001690 ORTHO05D009096 2.8e-32 142.5 95 66.3
arahy.Tifrunner.gnm1.ann1.00SZA6 Arachis hypogaea HOM05D001690 ORTHO05D009096 3.7e-32 142.1 96 67.7
ClCG05G025030 Citrullus lanatus HOM05D001690 ORTHO05D009096 4.8e-32 141.7 95 69.5
Lj2g0027896 Lotus japonicus HOM05D001690 ORTHO05D009096 4.8e-32 141.7 96 65.6
unitig_699.g19928 Utricularia gibba HOM05D001690 ORTHO05D009096 4.8e-32 141.7 104 66.3
TPR.G13490 Trifolium pratense HOM05D001690 ORTHO05D009096 6.3e-32 141.4 98 66.3
Sed0019838 Sechium edule HOM05D001690 ORTHO05D009096 8.3e-32 141.0 95 71.6
CANSAT25G2126 Cannabis sativa HOM05D001690 ORTHO05D009096 1.4e-31 140.2 105 60.0
Psat2g111480 Pisum sativum HOM05D001690 ORTHO05D009096 2.4e-31 139.4 96 67.7
SEGI_04544 Sequoiadendron giganteum HOM05D001690 ORTHO05D009096 3.1e-31 139.0 95 67.4
CANSAT35G0663 Cannabis sativa HOM05D001690 ORTHO05D009096 5.4e-31 138.3 104 60.6
VMungo1215G1997 Vigna mungo HOM05D001690 ORTHO05D009096 5.4e-31 138.3 105 61.9
MSTRG.621 Avicennia marina HOM05D001690 ORTHO05D009096 7.0e-31 137.9 103 62.1
Nitab4.5_0005722g0030 Nicotiana tabacum HOM05D001690 ORTHO05D009096 1.2e-30 137.1 115 60.9
Zm00001eb371950 Zea mays HOM05D001690 ORTHO05D009096 2.0e-30 136.3 95 66.3
Pp3c10_1390 Physcomitrium patens HOM05D001690 ORTHO05D009096 3.5e-30 135.6 104 63.5
vmacro12906 Vaccinium macrocarpon HOM05D001690 ORTHO05D009096 4.5e-30 135.2 116 57.8
Medtr5g035310 Medicago truncatula HOM05D001690 ORTHO05D009096 7.7e-30 134.4 104 62.5
PSO063G0131 Papaver somniferum HOM05D001690 ORTHO05D009096 2.9e-29 132.5 95 64.2
PSO832G0212 Papaver somniferum HOM05D001690 ORTHO05D009096 2.9e-29 132.5 95 64.2
CDE04G3384 Ceratophyllum demersum HOM05D001690 ORTHO05D009096 5.0e-29 131.7 95 65.3
Glyma.02G037900 Glycine max HOM05D001690 ORTHO05D009096 8.6e-29 131.0 105 60.0
HPP92_017336 Vanilla planifolia HOM05D001690 ORTHO05D009096 4.2e-28 128.6 108 57.4
Nitab4.5_0000257g0260 Nicotiana tabacum HOM05D001690 ORTHO05D009096 7.2e-28 127.9 108 62.0
CBR_g38731 Chara braunii HOM05D001690 ORTHO05D009096 9.5e-28 127.5 96 58.3
SMO147G0177 Selaginella moellendorffii HOM05D001690 ORTHO05D009096 2.0e-25 119.8 106 59.4
Psat2g111840 Pisum sativum HOM05D000009 ORTHO05D000008 2.8e-24 115.9 83 66.3
Phvul.002G059700 Phaseolus vulgaris HOM05D001690 ORTHO05D009096 9.2e-23 110.9 96 59.4
Nn4g22883 Nelumbo nucifera HOM05D001690 ORTHO05D009096 8.0e-19 97.8 56 76.8
MELO3C012024.2 Cucumis melo HOM05D001690 ORTHO05D009096 1.4e-15 87.0 56 67.9
EL10Ac5g11364 Beta vulgaris HOM05D001690 ORTHO05D009096 3.2e-15 85.9 67 73.1
EL10Ac6g14125 Beta vulgaris HOM05D001690 ORTHO05D009096 2.7e-14 82.8 140 44.3
EL10Ac5g10984 Beta vulgaris HOM05D001690 ORTHO05D009096 3.3e-12 75.9 39 97.4
Solyc05g006100.4 Solanum lycopersicum HOM05D001690 ORTHO05D009096 8.3e-08 61.2 48 60.4


User provided reference genes

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