Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21063 Beta vulgaris HOM05D003601 ORTHO05D004896 2.1e-86 322.4 173 100.0
EL10Ac9g21625 Beta vulgaris HOM05D003601 ORTHO05D004896 3.3e-63 245.4 170 81.8
EL10Ac5g12528 Beta vulgaris HOM05D003601 ORTHO05D004896 6.9e-45 184.5 112 92.9
Ah.01g018710 Amaranthus hybridus HOM05D003601 ORTHO05D004896 3.9e-32 142.1 143 62.2
Hund16704 Selenicereus undatus HOM05D003601 ORTHO05D004896 1.5e-28 130.2 113 63.7
TWI59G1066 Tripterygium wilfordii HOM05D003601 ORTHO05D004896 1.3e-27 127.1 118 58.5
QL05p061428 Quercus lobata HOM05D003601 ORTHO05D004896 1.1e-26 124.0 108 62.0
AUR62016842 Chenopodium quinoa HOM05D003601 ORTHO05D004896 1.5e-26 123.6 110 68.2
Haze_15640 Corylus avellana HOM05D003601 ORTHO05D004896 1.9e-26 123.2 108 60.2
Sopen02g026770 Solanum pennellii HOM05D003601 ORTHO05D004896 1.9e-26 123.2 107 63.6
arahy.Tifrunner.gnm1.ann1.JS26LE Arachis hypogaea HOM05D003601 ORTHO05D004896 2.5e-26 122.9 108 63.0
Glyma.03G025400 Glycine max HOM05D003601 ORTHO05D004896 2.5e-26 122.9 108 63.0
PGSC0003DMG400013655 Solanum tuberosum HOM05D003601 ORTHO05D004896 3.2e-26 122.5 107 63.6
CiPaw.01G074700 Carya illinoinensis HOM05D003601 ORTHO05D004896 7.2e-26 121.3 110 62.7
CAN.G809.19 Capsicum annuum HOM05D003601 ORTHO05D004896 1.2e-25 120.6 112 63.4
Dinv32573 Davidia involucrata HOM05D003601 ORTHO05D004896 1.2e-25 120.6 110 61.8
Nitab4.5_0001815g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 1.2e-25 120.6 107 62.6
QL01p016478 Quercus lobata HOM05D003601 ORTHO05D004896 1.2e-25 120.6 114 57.0
Phvul.010G084000 Phaseolus vulgaris HOM05D003601 ORTHO05D004896 1.6e-25 120.2 108 63.0
arahy.Tifrunner.gnm1.ann1.EN9PMD Arachis hypogaea HOM05D003601 ORTHO05D004896 2.1e-25 119.8 108 61.1
Glyma.05G210600 Glycine max HOM05D003601 ORTHO05D004896 2.1e-25 119.8 108 62.0
TAR374G1433 Trochodendron aralioides HOM05D003601 ORTHO05D004896 3.6e-25 119.0 115 58.3
TAR374G1718 Trochodendron aralioides HOM05D003601 ORTHO05D004896 3.6e-25 119.0 115 58.3
ClCG08G004950 Citrullus lanatus HOM05D003601 ORTHO05D004896 4.7e-25 118.6 114 61.4
CsaV3_6G034170 Cucumis sativus L. HOM05D003601 ORTHO05D004896 4.7e-25 118.6 108 63.9
Peaxi162Scf01343g00152 Petunia axillaris HOM05D003601 ORTHO05D004896 4.7e-25 118.6 107 62.6
QL05p061139 Quercus lobata HOM05D003601 ORTHO05D004896 4.7e-25 118.6 108 59.3
Sc23g0002160 Simmondsia chinensis HOM05D003601 ORTHO05D004896 4.7e-25 118.6 108 63.9
MELO3C010640.2 Cucumis melo HOM05D003601 ORTHO05D004896 8.0e-25 117.9 108 63.9
Lj8C0T4 Lonicera japonica HOM05D003601 ORTHO05D004896 8.0e-25 117.9 125 57.6
Lj8C4T0 Lonicera japonica HOM05D003601 ORTHO05D004896 8.0e-25 117.9 125 57.6
CSS0034548 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 1.0e-24 117.5 107 60.7
Glyma.08G286000 Glycine max HOM05D003601 ORTHO05D004896 1.0e-24 117.5 123 56.1
Nitab4.5_0000614g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 1.0e-24 117.5 111 61.3
Eucgr.L01590 Eucalyptus grandis HOM05D003601 ORTHO05D004896 1.4e-24 117.1 108 60.2
Manes.02G115900 Manihot esculenta HOM05D003601 ORTHO05D004896 1.4e-24 117.1 108 61.1
Manes.07G071780 Manihot esculenta HOM05D003601 ORTHO05D004896 1.8e-24 116.7 108 61.1
Gohir.D02G113600 Gossypium hirsutum HOM05D003601 ORTHO05D004896 2.3e-24 116.3 108 60.2
VMungo0331G0886 Vigna mungo HOM05D003601 ORTHO05D004896 3.0e-24 115.9 108 60.2
CANSAT11G0274 Cannabis sativa HOM05D003601 ORTHO05D004896 5.2e-24 115.2 140 48.6
Dinv18735 Davidia involucrata HOM05D003601 ORTHO05D004896 5.2e-24 115.2 112 58.0
Eucgr.D01238 Eucalyptus grandis HOM05D003601 ORTHO05D004896 5.2e-24 115.2 108 58.3
Gorai.005G129300 Gossypium raimondii HOM05D003601 ORTHO05D004896 5.2e-24 115.2 108 59.3
Medtr7g109250 Medicago truncatula HOM05D003601 ORTHO05D004896 6.7e-24 114.8 108 59.3
Lj1g0023495 Lotus japonicus HOM05D003601 ORTHO05D004896 1.1e-23 114.0 108 60.2
Gohir.A03G095300 Gossypium hirsutum HOM05D003601 ORTHO05D004896 1.5e-23 113.6 108 58.3
Potri.014G097300 Populus trichocarpa HOM05D003601 ORTHO05D004896 1.5e-23 113.6 100 61.0
Sabra14G0071300 Salix brachista HOM05D003601 ORTHO05D004896 1.5e-23 113.6 100 61.0
Sed0004785 Sechium edule HOM05D003601 ORTHO05D004896 2.0e-23 113.2 114 59.6
QL05p063445 Quercus lobata HOM05D003601 ORTHO05D004896 2.6e-23 112.8 100 60.0
Rhsim07G0005200 Rhododendron simsii HOM05D003601 ORTHO05D004896 4.4e-23 112.1 108 59.3
Ciclev10021165m.g Citrus clementina HOM05D003601 ORTHO05D004896 5.7e-23 111.7 113 58.4
Ca_09198_v3 Cicer arietinum L. HOM05D003601 ORTHO05D004896 7.5e-23 111.3 108 57.4
Atru.chr5.650 Acer truncatum HOM05D003601 ORTHO05D004896 9.7e-23 110.9 114 53.5
Duzib151G0301 Durio zibethinus HOM05D003601 ORTHO05D004896 9.7e-23 110.9 110 58.2
Peaxi162Scf00036g00412 Petunia axillaris HOM05D003601 ORTHO05D004896 9.7e-23 110.9 107 60.7
BolC5t28850H Brassica oleracea HOM05D003601 ORTHO05D004896 1.3e-22 110.5 116 54.3
Cc05_g04050 Coffea canephora HOM05D003601 ORTHO05D004896 2.2e-22 109.8 105 61.0
BcaB03g13575 Brassica carinata HOM05D003601 ORTHO05D004896 2.8e-22 109.4 116 53.4
C05p00620 Brassica napus HOM05D003601 ORTHO05D004896 2.8e-22 109.4 116 53.4
A10p00590 Brassica napus HOM05D003601 ORTHO05D004896 3.7e-22 109.0 113 58.4
Thecc.04G197100 Theobroma cacao HOM05D003601 ORTHO05D004896 4.8e-22 108.6 108 57.4
GSVIVG01027082001 Vitis vinifera HOM05D003601 ORTHO05D004896 4.8e-22 108.6 101 62.4
Nn2g12387 Nelumbo nucifera HOM05D003601 ORTHO05D004896 1.1e-21 107.5 120 55.8
BcaB03g13574 Brassica carinata HOM05D003601 ORTHO05D004896 1.4e-21 107.1 141 47.5
unitig_0.g331 Utricularia gibba HOM05D003601 ORTHO05D004896 1.8e-21 106.7 107 59.8
BraA10t42337Z Brassica rapa HOM05D003601 ORTHO05D004896 2.4e-21 106.3 116 52.6
Lalb_Chr04g0261591 Lupinus albus HOM05D003601 ORTHO05D004896 2.4e-21 106.3 96 61.5
COL.COLO4_20208 Corchorus olitorius HOM05D003601 ORTHO05D004896 4.1e-21 105.5 109 56.0
Thhalv10009432m.g Eutrema salsugineum HOM05D003601 ORTHO05D004896 4.1e-21 105.5 110 58.2
MSTRG.17333 Avicennia marina HOM05D003601 ORTHO05D004896 7.0e-21 104.8 141 47.5
PGR042G1585 Punica granatum HOM05D003601 ORTHO05D004896 7.0e-21 104.8 109 53.2
vmacro23173 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 7.0e-21 104.8 108 57.4
THA.LOC104812142 Tarenaya hassleriana HOM05D003601 ORTHO05D004896 1.2e-20 104.0 100 61.0
TPR.G8712 Trifolium pratense HOM05D003601 ORTHO05D004896 1.2e-20 104.0 112 54.5
AL1G11100 Arabidopsis lyrata HOM05D003601 ORTHO05D004896 2.0e-20 103.2 109 56.0
Peaxi162Scf00130g01110 Petunia axillaris HOM05D003601 ORTHO05D004896 2.0e-20 103.2 109 56.9
FAN14G0738 Fragaria x ananassa HOM05D003601 ORTHO05D004896 2.6e-20 102.8 110 56.4
Carub.0001s0088 Capsella rubella HOM05D003601 ORTHO05D004896 3.5e-20 102.4 108 54.6
Aa31LG11G12300 Aethionema arabicum HOM05D003601 ORTHO05D004896 4.5e-20 102.1 104 58.7
Cpa.g.sc273.4 Carica papaya HOM05D003601 ORTHO05D004896 4.5e-20 102.1 94 60.6
DCAR_004784 Daucus carota HOM05D003601 ORTHO05D004896 5.9e-20 101.7 110 54.5
FvH4_6g10411 Fragaria vesca HOM05D003601 ORTHO05D004896 7.7e-20 101.3 110 55.5
Psat3g020760 Pisum sativum HOM05D003601 ORTHO05D004896 7.7e-20 101.3 96 59.4
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.0e-19 100.9 110 55.5
RcHm_v2.0_Chr3g0492261 Rosa chinensis HOM05D003601 ORTHO05D004896 1.3e-19 100.5 110 54.5
AT1G01350 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 1.7e-19 100.1 109 56.0
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.7e-19 100.1 110 54.5
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.7e-19 100.1 110 55.5
MD01G1079100 Malus domestica HOM05D003601 ORTHO05D004896 1.7e-19 100.1 101 55.4
Sp1g00940 Schrenkiella parvula HOM05D003601 ORTHO05D004896 2.2e-19 99.8 109 55.0
SHI13229 Sapria himalayana HOM05D003601 ORTHO05D004896 3.8e-19 99.0 110 55.5
Duzib212G0966 Durio zibethinus HOM05D003601 ORTHO05D004896 5.0e-19 98.6 105 52.4
ECA236G1416 Erigeron canadensis HOM05D003601 ORTHO05D004896 6.5e-19 98.2 105 58.1
AT5G06420 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 4.2e-18 95.5 109 54.1
CARHR001090 Cardamine hirsuta HOM05D003601 ORTHO05D004896 4.2e-18 95.5 109 54.1
Aqoxy3G00289 Aquilegia oxysepala HOM05D003601 ORTHO05D004896 5.5e-18 95.1 62 80.6
DCAR_004777 Daucus carota HOM05D003601 ORTHO05D004896 7.2e-18 94.7 124 47.6
Prupe.6G288300 Prunus persica HOM05D003601 ORTHO05D004896 7.2e-18 94.7 115 51.3
SEGI_12555 Sequoiadendron giganteum HOM05D003601 ORTHO05D004896 7.2e-18 94.7 119 51.3
Actinidia10120 Actinidia chinensis HOM05D003601 ORTHO05D004896 1.6e-17 93.6 114 50.9
SGA_v2.0_scaffold5G03009 Striga asiatica HOM05D003601 ORTHO05D004896 1.6e-17 93.6 86 61.6
QL04p075806 Quercus lobata HOM05D003601 ORTHO05D004896 2.1e-17 93.2 94 55.3
Sed0000777 Sechium edule HOM05D003601 ORTHO05D004896 2.7e-17 92.8 90 60.0
CDE08G0937 Ceratophyllum demersum HOM05D003601 ORTHO05D004896 3.6e-17 92.4 102 53.9
MD04G1169800 Malus domestica HOM05D003601 ORTHO05D004896 3.6e-17 92.4 110 51.8
CSS0019404 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 3.0e-16 89.4 70 68.6
SGA_v2.0_scaffold25G10756 Striga asiatica HOM05D003601 ORTHO05D004896 3.0e-16 89.4 92 56.5
PSO541G5643 Papaver somniferum HOM05D003601 ORTHO05D004896 5.2e-16 88.6 103 52.4
TPR.G20293 Trifolium pratense HOM05D003601 ORTHO05D004896 8.8e-16 87.8 97 53.6
HanXRQChr04g0120251 Helianthus annuus HOM05D003601 ORTHO05D004896 2.6e-15 86.3 89 57.3
Lsat_1_v5_gn_7_1360 Lactuca sativa HOM05D003601 ORTHO05D004896 9.8e-15 84.3 88 60.2
Nitab4.5_0005819g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 6.3e-14 81.6 107 50.5
Nitab4.5_0010133g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 6.3e-14 81.6 66 68.2
Thecc.07G081100 Theobroma cacao HOM05D003601 ORTHO05D004896 6.3e-14 81.6 89 55.1
HPP92_024723 Vanilla planifolia HOM05D003601 ORTHO05D004896 8.3e-14 81.3 113 48.7
Cfa003813 Carpinus fangiana HOM05D003601 ORTHO05D004896 3.1e-13 79.3 108 43.5
ECA247G1228 Erigeron canadensis HOM05D003601 ORTHO05D004896 3.1e-13 79.3 60 70.0
HanXRQChr06g0170651 Helianthus annuus HOM05D003601 ORTHO05D004896 3.1e-13 79.3 90 53.3
Actinidia26616 Actinidia chinensis HOM05D003601 ORTHO05D004896 4.1e-13 79.0 89 53.9
PSO675G3308 Papaver somniferum HOM05D003601 ORTHO05D004896 4.1e-13 79.0 103 52.4
Mapoly0066s0113 Marchantia polymorpha HOM05D003601 ORTHO05D004896 5.4e-13 78.6 112 48.2
ATR1127G077 Amborella trichopoda HOM05D003601 ORTHO05D004896 9.1e-13 77.8 102 50.0
TPR.G29640 Trifolium pratense HOM05D003601 ORTHO05D004896 2.0e-12 76.6 96 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3813 Anthoceros agrestis HOM05D003601 ORTHO05D004896 1.7e-11 73.6 69 58.0
EL10Ac2g03558 Beta vulgaris HOM05D003601 ORTHO05D004896 5.0e-11 72.0 69 65.2
LjContig00564g0001173 Lotus japonicus HOM05D003601 ORTHO05D004896 8.5e-11 71.2 65 60.0
Rhsim01G0171500 Rhododendron simsii HOM05D003601 ORTHO05D004896 1.1e-10 70.9 104 41.3
vmacro10191 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 1.5e-10 70.5 98 46.9
vmacro20852 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 1.5e-10 70.5 98 46.9
Peaxi162Scf00119g01222 Petunia axillaris HOM05D003601 ORTHO05D004896 2.7e-09 66.2 52 63.5
Duzib212G0206 Durio zibethinus HOM05D003601 ORTHO05D004896 1.8e-08 63.5 98 44.9
Migut.B01852 Erythranthe guttata HOM05D003601 ORTHO05D004896 1.8e-08 63.5 113 40.7
Pp3c8_16180 Physcomitrium patens HOM05D003601 ORTHO05D004896 8.8e-08 61.2 102 44.1
CBR_g49218 Chara braunii HOM05D003601 ORTHO05D004896 5.7e-07 58.5 54 59.3
Zm00001eb204190 Zea mays HOM05D003601 ORTHO05D004896 5.7e-07 58.5 72 55.6
TPR.G20298 Trifolium pratense HOM05D003601 ORTHO05D037558 7.5e-07 58.2 59 52.5
MD07G1148000 Malus domestica HOM05D003601 ORTHO05D004896 1.7e-06 57.0 39 69.2
COL.COLO4_33292 Corchorus olitorius HOM05D002650 ORTHO05D002924 2.2e-06 56.6 133 33.1
CBR_g26342 Chara braunii HOM05D003601 ORTHO05D004896 2.8e-06 56.2 74 45.9
QL05p061570 Quercus lobata HOM05D003601 ORTHO05D004896 2.8e-06 56.2 69 46.4
SMO351G0471 Selaginella moellendorffii HOM05D003601 ORTHO05D004896 6.3e-06 55.1 97 44.3


User provided reference genes

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