Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 7.8e-135 483.8 245 100.0
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 2.8e-100 369.0 244 78.3
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 4.5e-82 308.5 243 66.3
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 4.2e-64 248.8 244 54.1
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 3.6e-63 245.7 242 54.1
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 2.3e-62 243.0 240 55.0
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 3.0e-62 242.7 242 54.1
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 1.2e-61 240.7 253 53.4
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 9.8e-61 237.7 244 53.3
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 1.3e-60 237.3 244 50.8
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 1.4e-59 233.8 242 52.1
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 1.2e-58 230.7 240 52.1
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 2.7e-58 229.6 244 51.2
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.3e-57 226.5 242 51.2
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 2.9e-57 226.1 242 51.2
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 3.2e-56 222.6 244 48.8
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 1.6e-55 220.3 242 51.2
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 3.6e-55 219.2 244 48.4
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 1.0e-54 217.6 244 49.2
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 1.8e-54 216.9 243 49.4
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 2.3e-54 216.5 240 48.8
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 2.3e-54 216.5 244 47.1
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 3.0e-54 216.1 239 47.3
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 4.0e-54 215.7 242 48.8
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 5.2e-54 215.3 244 47.1
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 6.8e-54 214.9 244 47.5
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 8.8e-54 214.5 244 46.7
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 2.0e-53 213.4 244 46.7
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 3.4e-53 212.6 239 47.7
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 5.7e-53 211.8 244 46.3
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 1.3e-52 210.7 242 49.2
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 1.7e-52 210.3 246 46.7
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 1.7e-52 210.3 239 47.3
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 2.8e-52 209.5 243 48.6
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 6.3e-52 208.4 244 47.5
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 6.3e-52 208.4 239 45.2
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 8.3e-52 208.0 243 47.3
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 1.1e-51 207.6 246 45.9
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 1.8e-51 206.8 241 49.0
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 5.4e-51 205.3 242 45.9
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.6e-50 203.8 244 45.9
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 2.7e-50 203.0 239 44.8
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 4.5e-50 202.2 244 45.5
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 4.5e-50 202.2 244 47.1
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 1.7e-49 200.3 191 56.0
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 2.3e-49 199.9 236 47.9
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 6.6e-49 198.4 244 45.5
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 8.6e-49 198.0 247 44.1
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.1e-48 197.6 144 73.6
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 1.1e-48 197.6 238 45.4
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 1.9e-48 196.8 242 45.9
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 1.9e-48 196.8 244 46.7
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 4.3e-48 195.7 268 44.4
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.2e-47 194.1 242 45.0
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.2e-47 194.1 237 45.1
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 6.1e-47 191.8 239 44.8
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 6.1e-47 191.8 179 54.2
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 4.0e-46 189.1 239 46.4
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 6.8e-46 188.3 241 45.2
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 8.9e-46 188.0 244 46.3
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 8.9e-46 188.0 241 45.6
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 8.9e-46 188.0 244 42.6
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 1.5e-45 187.2 244 43.4
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 1.5e-45 187.2 243 44.9
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 1.5e-45 187.2 244 43.4
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 5.7e-45 185.3 240 44.2
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 4.9e-44 182.2 243 42.0
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 4.9e-44 182.2 241 42.3
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 1.8e-43 180.3 248 43.5
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 3.2e-43 179.5 237 45.1
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 9.2e-43 177.9 260 40.4
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 9.2e-43 177.9 265 43.8
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.2e-42 177.6 245 44.5
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 2.0e-42 176.8 244 41.4
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 5.9e-42 175.3 243 44.0
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 7.8e-42 174.9 244 42.6
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 3.9e-41 172.6 246 41.5
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 6.6e-41 171.8 250 42.4
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 1.9e-40 170.2 234 44.4
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 2.5e-40 169.9 248 40.7
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 1.2e-39 167.5 243 40.7
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.6e-39 167.2 234 44.0
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 1.6e-39 167.2 250 40.0
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 2.8e-39 166.4 234 44.0
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 4.7e-39 165.6 208 43.8
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 3.1e-38 162.9 231 41.1
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 5.2e-38 162.2 240 39.6
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 2.0e-37 160.2 236 41.9
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 3.4e-37 159.5 263 41.1
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 5.8e-37 158.7 250 41.2
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 2.9e-36 156.4 206 44.7
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 1.9e-35 153.7 244 37.7
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 3.2e-35 152.9 179 49.7
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 9.2e-35 151.4 180 46.1
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 7.8e-34 148.3 204 42.6
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 3.0e-33 146.4 206 42.2
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 5.0e-33 145.6 255 38.0
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 2.3e-30 136.7 247 38.5
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 1.2e-29 134.4 173 46.8
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 2.0e-29 133.7 241 39.0
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 3.7e-28 129.4 244 36.9
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 4.1e-27 125.9 138 50.7
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 5.4e-27 125.6 240 36.2
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 8.6e-25 118.2 179 43.0
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 1.2e-21 107.8 203 31.5
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 5.8e-21 105.5 77 67.5
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 2.2e-20 103.6 205 31.2
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 8.4e-20 101.7 126 47.6
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 1.5e-16 90.9 198 29.8
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 3.3e-16 89.7 142 39.4
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 3.4e-13 79.7 61 67.2
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 3.8e-12 76.3 137 35.0
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 2.4e-11 73.6 65 58.5
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 4.6e-10 69.3 39 71.8
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 5.1e-09 65.9 36 72.2
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 1.3e-07 61.2 83 38.6
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 5.3e-06 55.8 107 36.4


User provided reference genes

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