Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g20955 Beta vulgaris HOM05D001705 ORTHO05D001002 1.4e-62 245.0 559 100.0
AUR62038925 Chenopodium quinoa HOM05D003705 ORTHO05D002725 2.3e-20 104.8 67 74.6
AUR62039001 Chenopodium quinoa HOM05D003705 ORTHO05D002725 1.5e-19 102.1 67 73.1
AUR62038929 Chenopodium quinoa HOM05D003705 ORTHO05D002725 1.6e-18 98.6 105 75.2
AUR62030057 Chenopodium quinoa HOM05D003705 ORTHO05D001002 4.7e-18 97.1 67 68.7
Ah.13g066700 Amaranthus hybridus HOM05D003705 ORTHO05D002725 2.2e-15 88.2 131 82.4
AUR62027163 Chenopodium quinoa HOM05D001705 ORTHO05D002725 6.6e-12 76.6 130 76.9
AUR62027162 Chenopodium quinoa HOM05D001705 ORTHO05D002725 8.6e-12 76.3 127 79.5
AUR62003299 Chenopodium quinoa HOM05D002120 ORTHO05D002725 1.5e-11 75.5 130 76.2
EL10As8g23862 Beta vulgaris HOM05D001705 ORTHO05D002725 5.6e-11 73.6 129 79.1
Cfa006934 Carpinus fangiana HOM05D001705 ORTHO05D002725 4.7e-10 70.5 184 57.6
Ah.02g124770 Amaranthus hybridus HOM05D001705 ORTHO05D002725 6.2e-10 70.1 129 76.7
Potri.007G016700 Populus trichocarpa HOM05D001705 ORTHO05D002725 8.0e-10 69.7 133 72.2
AUR62002982 Chenopodium quinoa HOM05D000312 ORTHO05D002725 1.0e-09 69.3 62 61.3
Rhsim08G0036100 Rhododendron simsii HOM05D001705 ORTHO05D002725 1.8e-09 68.6 127 74.8
Thecc.01G024300 Theobroma cacao HOM05D001705 ORTHO05D002725 2.3e-09 68.2 65 55.4
Ah.03g141660 Amaranthus hybridus HOM05D003705 ORTHO05D002725 3.1e-09 67.8 126 75.4
EL10Ac6g14594 Beta vulgaris HOM05D001705 ORTHO05D002725 5.2e-09 67.0 63 55.6
AUR62007657 Chenopodium quinoa HOM05D004495 ORTHO05D005361 5.2e-09 67.0 123 81.3
SGA_v2.0_scaffold2G01238 Striga asiatica HOM05D001705 ORTHO05D002725 5.2e-09 67.0 128 69.5
GSVIVG01018835001 Vitis vinifera HOM05D001705 ORTHO05D002725 6.8e-09 66.6 127 74.0
Sabra05G0096800 Salix brachista HOM05D001705 ORTHO05D002725 8.9e-09 66.2 133 66.9
SGA_v2.0_scaffold2G01235 Striga asiatica HOM05D002120 ORTHO05D002725 8.9e-09 66.2 128 73.4
Haze_03816 Corylus avellana HOM05D001705 ORTHO05D002725 1.5e-08 65.5 127 75.6
Sabra07G0013900 Salix brachista HOM05D001705 ORTHO05D002725 1.5e-08 65.5 133 70.7
Ah.02g125140 Amaranthus hybridus HOM05D001705 ORTHO05D002725 2.0e-08 65.1 59 61.0
AUR62007644 Chenopodium quinoa HOM05D004495 ORTHO05D005361 2.0e-08 65.1 66 56.1
Eucgr.I02373 Eucalyptus grandis HOM05D001705 ORTHO05D002725 2.6e-08 64.7 127 75.6
EL10Ac6g15676 Beta vulgaris HOM05D001705 ORTHO05D002725 3.4e-08 64.3 182 47.8
Sc07g0007330 Simmondsia chinensis HOM05D001705 ORTHO05D002725 3.4e-08 64.3 129 59.7
CSS0005183 Camellia sinensis var. sinensis HOM05D001705 ORTHO05D002725 4.4e-08 63.9 127 75.6
MD02G1136300 Malus domestica HOM05D004495 ORTHO05D005361 5.8e-08 63.5 65 49.2
MSTRG.2503 Avicennia marina HOM05D001705 ORTHO05D002725 7.5e-08 63.2 65 50.8
AUR62007789 Chenopodium quinoa HOM05D000312 ORTHO05D002725 7.5e-08 63.2 182 56.6
AUR62027161 Chenopodium quinoa HOM05D003705 ORTHO05D002725 7.5e-08 63.2 128 55.5
AUR62044398 Chenopodium quinoa HOM05D001705 ORTHO05D002725 7.5e-08 63.2 128 55.5
Migut.H02487 Erythranthe guttata HOM05D001705 ORTHO05D002725 7.5e-08 63.2 127 70.9
AUR62007790 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.3e-07 62.4 60 55.0
vmacro22099 Vaccinium macrocarpon HOM05D001705 ORTHO05D002725 1.3e-07 62.4 128 73.4
AUR62007788 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.7e-07 62.0 127 74.0
COL.COLO4_21972 Corchorus olitorius HOM05D001705 ORTHO05D002725 1.7e-07 62.0 128 73.4
Dinv40050 Davidia involucrata HOM05D001705 ORTHO05D002725 1.7e-07 62.0 183 56.8
Oeu005148.1 Olea europaea HOM05D001705 ORTHO05D002725 1.7e-07 62.0 130 71.5
FAN28G1436 Fragaria x ananassa HOM05D001705 ORTHO05D002725 2.2e-07 61.6 65 50.8
Gorai.008G064700 Gossypium raimondii HOM05D001705 ORTHO05D002725 2.2e-07 61.6 60 53.3
Manes.01G142200 Manihot esculenta HOM05D001705 ORTHO05D002725 2.2e-07 61.6 126 73.0
CiPaw.07G055300 Carya illinoinensis HOM05D001705 ORTHO05D002725 2.9e-07 61.2 127 74.0
Duzib147G0685 Durio zibethinus HOM05D001705 ORTHO05D002725 2.9e-07 61.2 127 72.4
Phvul.003G258800 Phaseolus vulgaris HOM05D001705 ORTHO05D002725 2.9e-07 61.2 63 50.8
Prupe.7G164400 Prunus persica HOM05D001705 ORTHO05D002725 2.9e-07 61.2 65 49.2
FvH4_1g12240 Fragaria vesca HOM05D001705 ORTHO05D002725 3.7e-07 60.8 65 49.2
PSO384G4644 Papaver somniferum HOM05D001705 ORTHO05D002725 3.7e-07 60.8 127 72.4
VMungo0251G2871 Vigna mungo HOM05D001705 ORTHO05D002725 3.7e-07 60.8 63 50.8
RcHm_v2.0_Chr2g0100021 Rosa chinensis HOM05D001705 ORTHO05D002725 4.9e-07 60.5 65 50.8
FAN23G3072 Fragaria x ananassa HOM05D004495 ORTHO05D005361 6.4e-07 60.1 65 49.2
PSO384G2660 Papaver somniferum HOM05D003705 ORTHO05D002725 8.3e-07 59.7 126 73.8
Gohir.A12G061400 Gossypium hirsutum HOM05D001705 ORTHO05D002725 1.4e-06 58.9 128 60.9
Atru.chr3.757 Acer truncatum HOM05D001705 ORTHO05D002725 1.9e-06 58.5 56 55.4
Cpa.g.sc6.205 Carica papaya HOM05D001705 ORTHO05D002725 1.9e-06 58.5 127 72.4
Gohir.D12G061500 Gossypium hirsutum HOM05D001705 ORTHO05D002725 1.9e-06 58.5 56 55.4
Ah.03g146170 Amaranthus hybridus HOM05D001705 ORTHO05D002725 3.2e-06 57.8 60 55.0
Ah.08g219840 Amaranthus hybridus HOM05D003705 ORTHO05D007730 3.2e-06 57.8 53 58.5
Ah.09g225520 Amaranthus hybridus HOM05D001705 ORTHO05D002725 3.2e-06 57.8 54 59.3
Actinidia19236 Actinidia chinensis HOM05D001705 ORTHO05D002725 4.1e-06 57.4 48 56.2
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 4.1e-06 57.4 63 46.0
FAN19G2547 Fragaria x ananassa HOM05D004495 ORTHO05D005361 4.1e-06 57.4 65 47.7
Nn5g29193 Nelumbo nucifera HOM05D001705 ORTHO05D002725 4.1e-06 57.4 56 53.6
HanXRQChr16g0530911 Helianthus annuus HOM05D001705 ORTHO05D002725 5.4e-06 57.0 63 50.8
AUR62003360 Chenopodium quinoa HOM05D002389 ORTHO05D138395 7.0e-06 56.6 95 66.3
HanXRQChr16g0530901 Helianthus annuus HOM05D001705 ORTHO05D002725 7.0e-06 56.6 63 50.8
PSO675G6176 Papaver somniferum HOM05D001705 ORTHO05D002725 7.0e-06 56.6 63 50.8
Aqoxy6G02406 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 9.2e-06 56.2 59 50.8
Glyma.16G131500 Glycine max HOM05D001705 ORTHO05D002725 9.2e-06 56.2 127 73.2
TAR628G0632 Trochodendron aralioides HOM05D001705 ORTHO05D002725 9.2e-06 56.2 128 71.1


User provided reference genes

Program Settings