Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g20889 Beta vulgaris HOM05D002321 ORTHO05D006445 7.4e-40 166.8 86 100.0
Ca_13527_v3 Cicer arietinum L. HOM05D002321 ORTHO05D006445 2.8e-23 111.7 68 79.4
Ah.03g136750 Amaranthus hybridus HOM05D002321 ORTHO05D006445 3.7e-23 111.3 75 77.3
EL10Ac6g13971 Beta vulgaris HOM05D002321 ORTHO05D006445 3.7e-23 111.3 72 79.2
Ah.02g128460 Amaranthus hybridus HOM05D002321 ORTHO05D006445 4.8e-23 110.9 75 76.0
AUR62040128 Chenopodium quinoa HOM05D002321 ORTHO05D006445 6.3e-23 110.5 72 76.4
AUR62042961 Chenopodium quinoa HOM05D002321 ORTHO05D006445 6.3e-23 110.5 72 76.4
Lj9A259T47 Lonicera japonica HOM05D002321 ORTHO05D006445 8.3e-23 110.2 72 77.8
ClCG10G007500 Citrullus lanatus HOM05D002321 ORTHO05D006445 1.4e-22 109.4 72 77.8
Dinv29637 Davidia involucrata HOM05D002321 ORTHO05D006445 1.4e-22 109.4 72 77.8
Oeu016640.1 Olea europaea HOM05D002321 ORTHO05D006445 1.4e-22 109.4 72 77.8
THA.LOC104824539 Tarenaya hassleriana HOM05D002321 ORTHO05D006445 1.4e-22 109.4 72 77.8
arahy.Tifrunner.gnm1.ann1.AGW9EK Arachis hypogaea HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
arahy.Tifrunner.gnm1.ann1.M3HJLJ Arachis hypogaea HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
CDE07G1618 Ceratophyllum demersum HOM05D002321 ORTHO05D006445 1.8e-22 109.0 71 78.9
Ciclev10000869m.g Citrus clementina HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
COL.COLO4_31117 Corchorus olitorius HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
ECA238G2920 Erigeron canadensis HOM05D002321 ORTHO05D006445 1.8e-22 109.0 76 75.0
Lj4g0019033 Lotus japonicus HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
Prupe.1G585900 Prunus persica HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
RcHm_v2.0_Chr7g0219391 Rosa chinensis HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
Sc03g0005760 Simmondsia chinensis HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
THA.LOC104809044 Tarenaya hassleriana HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
TPR.G5983 Trifolium pratense HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
GSVIVG01023138001 Vitis vinifera HOM05D002321 ORTHO05D006445 1.8e-22 109.0 72 76.4
FAN04G1883 Fragaria x ananassa HOM05D002321 ORTHO05D006445 2.4e-22 108.6 72 75.0
PSO210G3878 Papaver somniferum HOM05D002321 ORTHO05D006445 2.4e-22 108.6 72 75.0
PSO447G0115 Papaver somniferum HOM05D002321 ORTHO05D006445 2.4e-22 108.6 72 75.0
Sp6g11270 Schrenkiella parvula HOM05D002321 ORTHO05D006445 2.4e-22 108.6 72 76.4
Cpa.g.sc173.6 Carica papaya HOM05D002321 ORTHO05D006445 3.1e-22 108.2 71 77.5
ClCG05G014590 Citrullus lanatus HOM05D002321 ORTHO05D006445 3.1e-22 108.2 72 76.4
MELO3C016450.2 Cucumis melo HOM05D002321 ORTHO05D006445 3.1e-22 108.2 72 76.4
MD15G1443300 Malus domestica HOM05D002321 ORTHO05D006445 3.1e-22 108.2 72 75.0
Manes.07G030900 Manihot esculenta HOM05D002321 ORTHO05D006445 3.1e-22 108.2 72 76.4
Manes.10G106100 Manihot esculenta HOM05D002321 ORTHO05D006445 3.1e-22 108.2 72 76.4
TAR381G0422 Trochodendron aralioides HOM05D002321 ORTHO05D006445 3.1e-22 108.2 72 76.4
TAR381G1352 Trochodendron aralioides HOM05D002321 ORTHO05D006445 3.1e-22 108.2 72 76.4
CSS0017136 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 4.1e-22 107.8 72 76.4
FvH4_5g27690 Fragaria vesca HOM05D002321 ORTHO05D006445 4.1e-22 107.8 72 75.0
FAN08G1447 Fragaria x ananassa HOM05D002321 ORTHO05D006445 4.1e-22 107.8 72 75.0
FAN13G2899 Fragaria x ananassa HOM05D002321 ORTHO05D006445 4.1e-22 107.8 72 75.0
Gohir.A03G081200 Gossypium hirsutum HOM05D002321 ORTHO05D006445 4.1e-22 107.8 72 75.0
Lsat_1_v5_gn_9_124960 Lactuca sativa HOM05D002321 ORTHO05D006445 4.1e-22 107.8 76 73.7
SGA_v2.0_scaffold131G34422 Striga asiatica HOM05D002321 ORTHO05D006445 4.1e-22 107.8 72 75.0
unitig_749.g14114 Utricularia gibba HOM05D002321 ORTHO05D006445 4.1e-22 107.8 76 69.7
Aa31sc221G80 Aethionema arabicum HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
AL8G23790 Arabidopsis lyrata HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
AT5G49820 Arabidopsis thaliana HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
Carub.0008s0970 Capsella rubella HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
CARHR258950 Cardamine hirsuta HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
Thhalv10013323m.g Eutrema salsugineum HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
Glyma.07G272200 Glycine max HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
Glyma.17G002100 Glycine max HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
Medtr4g077650 Medicago truncatula HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
QL02p103548 Quercus lobata HOM05D002321 ORTHO05D006445 5.3e-22 107.5 72 75.0
ATR1089G008 Amborella trichopoda HOM05D002321 ORTHO05D006445 7.0e-22 107.1 71 74.6
Aqoxy6G00020 Aquilegia oxysepala HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 75.0
CSS0022296 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 73.6
CANSAT01G1907 Cannabis sativa HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 73.6
CsaV3_3G006710 Cucumis sativus L. HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 75.0
MD08G1248500 Malus domestica HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 73.6
Potri.004G229500 Populus trichocarpa HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 76.4
TWI59G0552 Tripterygium wilfordii HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 73.6
unitig_26.g9009 Utricularia gibba HOM05D002321 ORTHO05D006445 7.0e-22 107.1 72 73.6
Hma1.2p1_0157F.1_g069140 Hydrangea macrophylla HOM05D002321 ORTHO05D006445 9.1e-22 106.7 72 75.0
Lalb_Chr12g0195871 Lupinus albus HOM05D002321 ORTHO05D006445 9.1e-22 106.7 72 73.6
MBI06_g43030_MAGBIO Magnolia biondii HOM05D002321 ORTHO05D006445 9.1e-22 106.7 74 73.0
Psat4g002680 Pisum sativum HOM05D002321 ORTHO05D006445 9.1e-22 106.7 72 75.0
Sed0020041 Sechium edule HOM05D002321 ORTHO05D006445 9.1e-22 106.7 72 75.0
Thecc.06G020000 Theobroma cacao HOM05D002321 ORTHO05D006445 9.1e-22 106.7 72 73.6
Cc02_g23720 Coffea canephora HOM05D002321 ORTHO05D006445 1.2e-21 106.3 72 73.6
Gohir.D02G105400 Gossypium hirsutum HOM05D002321 ORTHO05D006445 1.2e-21 106.3 72 73.6
Gorai.005G119600 Gossypium raimondii HOM05D002321 ORTHO05D006445 1.2e-21 106.3 72 73.6
MBI03_g34265_MAGBIO Magnolia biondii HOM05D002321 ORTHO05D006445 1.2e-21 106.3 72 73.6
Medtr4g134590 Medicago truncatula HOM05D002321 ORTHO05D006445 1.2e-21 106.3 72 73.6
VMungo1215G1402 Vigna mungo HOM05D002321 ORTHO05D006445 1.2e-21 106.3 72 73.6
Dinv29681 Davidia involucrata HOM05D002321 ORTHO05D006445 1.6e-21 105.9 72 75.0
HanXRQChr09g0248771 Helianthus annuus HOM05D002321 ORTHO05D006445 1.6e-21 105.9 76 72.4
Peaxi162Scf00071g00002 Petunia axillaris HOM05D002321 ORTHO05D006445 1.6e-21 105.9 72 75.0
Sed0026062 Sechium edule HOM05D002321 ORTHO05D006445 1.6e-21 105.9 72 72.2
TAR628G0856 Trochodendron aralioides HOM05D002321 ORTHO05D006445 1.6e-21 105.9 70 75.7
Cfa004434 Carpinus fangiana HOM05D002321 ORTHO05D006445 2.0e-21 105.5 72 73.6
Haze_09974 Corylus avellana HOM05D002321 ORTHO05D006445 2.0e-21 105.5 72 73.6
Nn5g27149 Nelumbo nucifera HOM05D002321 ORTHO05D006445 2.0e-21 105.5 72 72.2
Sabra01G0174700 Salix brachista HOM05D002321 ORTHO05D006445 2.0e-21 105.5 72 75.0
BcaB05g24065 Brassica carinata HOM05D002321 ORTHO05D006445 2.7e-21 105.1 72 73.6
Migut.B00717 Erythranthe guttata HOM05D002321 ORTHO05D006445 2.7e-21 105.1 72 72.2
Lj5A285T49 Lonicera japonica HOM05D002321 ORTHO05D006445 2.7e-21 105.1 72 73.6
Atru.chr6.213 Acer truncatum HOM05D002321 ORTHO05D006445 3.5e-21 104.8 72 72.2
PGR042G0050 Punica granatum HOM05D002321 ORTHO05D006445 3.5e-21 104.8 72 72.2
Actinidia26198 Actinidia chinensis HOM05D002321 ORTHO05D006445 4.5e-21 104.4 72 72.2
CiPaw.05G001300 Carya illinoinensis HOM05D002321 ORTHO05D006445 4.5e-21 104.4 72 72.2
Duzib192G0835 Durio zibethinus HOM05D002321 ORTHO05D006445 4.5e-21 104.4 72 72.2
Phvul.003G091200 Phaseolus vulgaris HOM05D002321 ORTHO05D006445 4.5e-21 104.4 72 70.8
BcaC03g14664 Brassica carinata HOM05D002321 ORTHO05D006445 7.7e-21 103.6 72 72.2
A02p12920 Brassica napus HOM05D002321 ORTHO05D006445 7.7e-21 103.6 72 72.2
C02p20990 Brassica napus HOM05D002321 ORTHO05D006445 7.7e-21 103.6 72 72.2
BolC2t08242H Brassica oleracea HOM05D002321 ORTHO05D006445 7.7e-21 103.6 72 72.2
BraA02t06346Z Brassica rapa HOM05D002321 ORTHO05D006445 7.7e-21 103.6 72 72.2
Peaxi162Scf00000g00067 Petunia axillaris HOM05D002321 ORTHO05D006445 7.7e-21 103.6 72 72.2
HPP92_019419 Vanilla planifolia HOM05D002321 ORTHO05D006445 7.7e-21 103.6 72 70.8
CSS0014792 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 1.3e-20 102.8 68 76.5
vmacro19825 Vaccinium macrocarpon HOM05D002321 ORTHO05D006445 1.3e-20 102.8 71 71.8
Zm00001eb288290 Zea mays HOM05D002321 ORTHO05D006445 1.7e-20 102.4 72 70.8
BcaB01g02869 Brassica carinata HOM05D002321 ORTHO05D006445 2.2e-20 102.1 72 72.2
SHI04996 Sapria himalayana HOM05D002321 ORTHO05D000001 2.2e-20 102.1 72 70.8
CSS0022931 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 2.9e-20 101.7 74 71.6
CSS0027899 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 2.9e-20 101.7 74 71.6
Eucgr.G00067 Eucalyptus grandis HOM05D002321 ORTHO05D006445 2.9e-20 101.7 72 69.4
Nitab4.5_0000460g0050 Nicotiana tabacum HOM05D002321 ORTHO05D006445 2.9e-20 101.7 72 70.8
Nitab4.5_0010848g0010 Nicotiana tabacum HOM05D002321 ORTHO05D006445 2.9e-20 101.7 72 70.8
Solyc10g008560.3 Solanum lycopersicum HOM05D002321 ORTHO05D006445 2.9e-20 101.7 72 70.8
Sopen10g004370 Solanum pennellii HOM05D002321 ORTHO05D006445 2.9e-20 101.7 72 70.8
PGSC0003DMG400021663 Solanum tuberosum HOM05D002321 ORTHO05D006445 2.9e-20 101.7 72 70.8
CAN.G168.25 Capsicum annuum HOM05D002321 ORTHO05D006445 3.8e-20 101.3 72 70.8
Mapoly0083s0024 Marchantia polymorpha HOM05D002321 ORTHO05D006445 3.8e-20 101.3 71 71.8
Zm00001eb349160 Zea mays HOM05D002321 ORTHO05D006445 5.0e-20 100.9 72 69.4
FAN18G0084 Fragaria x ananassa HOM05D002321 ORTHO05D006445 8.5e-20 100.1 66 77.3
CSS0020429 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 1.1e-19 99.8 68 72.1
Pp3c6_25980 Physcomitrium patens HOM05D002321 ORTHO05D006445 1.5e-19 99.4 73 67.1
Os01g0886900 Oryza sativa ssp. japonica HOM05D002321 ORTHO05D006445 2.5e-19 98.6 74 64.9
QL12p020365 Quercus lobata HOM05D002321 ORTHO05D006445 2.5e-19 98.6 73 69.9
Pp3c5_3000 Physcomitrium patens HOM05D002321 ORTHO05D006445 4.2e-19 97.8 73 65.8
SMO351G0153 Selaginella moellendorffii HOM05D002321 ORTHO05D006445 7.2e-19 97.1 72 65.3
Zm00001eb145400 Zea mays HOM05D002321 ORTHO05D006445 7.2e-19 97.1 74 63.5
Zm00001eb365980 Zea mays HOM05D002321 ORTHO05D006445 7.2e-19 97.1 74 63.5
QL02p065019 Quercus lobata HOM05D002321 ORTHO05D006445 9.4e-19 96.7 74 67.6
SEGI_38877 Sequoiadendron giganteum HOM05D002321 ORTHO05D006445 4.7e-18 94.4 74 60.8
SEGI_34248 Sequoiadendron giganteum HOM05D002321 ORTHO05D006445 4.0e-17 91.3 72 63.9
Rhsim05G0115000 Rhododendron simsii HOM05D002321 ORTHO05D006445 2.8e-15 85.1 60 73.3
Cre12.g560250 Chlamydomonas reinhardtii HOM05D002321 ORTHO05D006445 3.3e-11 71.6 72 50.0
Duzib160G0234 Durio zibethinus HOM05D002321 ORTHO05D006445 1.6e-10 69.3 42 73.8
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 3.1e-06 55.1 76 36.8


User provided reference genes

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