Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 3.7e-192 674.9 375 100.0
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 5.1e-117 425.2 330 66.4
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 1.6e-110 403.7 362 61.6
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 2.8e-107 392.9 363 62.0
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.1e-102 376.7 362 61.6
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 5.3e-90 335.5 355 56.9
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 8.7e-85 318.2 356 50.3
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 1.1e-79 301.2 337 50.1
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 2.1e-75 287.0 363 45.7
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 1.9e-71 273.9 363 45.5
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.1e-70 270.4 358 46.1
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 3.1e-58 229.9 374 40.4
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 8.8e-53 211.8 374 39.8
EL10Ac6g13636 Beta vulgaris HOM05D008906 ORTHO05D010752 1.2e-36 158.3 350 34.3
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 1.5e-36 157.9 341 32.6
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 3.7e-35 153.3 346 30.6
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 1.1e-34 151.8 255 39.2
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 1.8e-34 151.0 343 31.8
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 4.1e-34 149.8 346 30.3
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 9.1e-34 148.7 348 32.2
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 1.2e-33 148.3 346 31.2
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 7.7e-33 145.6 346 29.5
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 1.0e-32 145.2 346 30.6
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.2e-32 144.1 346 34.1
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 2.9e-32 143.7 346 29.8
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 1.6e-30 137.9 341 30.5
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 2.1e-30 137.5 276 34.1
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 4.0e-29 133.3 349 30.4
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 2.2e-27 127.5 352 29.3
AUR62031148 Chenopodium quinoa HOM05D008906 ORTHO05D010752 1.7e-24 117.9 290 33.1
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 2.6e-20 104.0 381 24.4
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 2.3e-16 90.9 373 27.1
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 6.8e-13 79.3 272 26.5
Sc08g0007400 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.4e-12 77.0 267 29.6
Sc08g0007420 Simmondsia chinensis HOM05D014687 ORTHO05D010752 4.4e-12 76.6 263 25.5
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 4.4e-12 76.6 186 32.3
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 2.2e-11 74.3 150 34.0
Sc06g0005950 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.3e-08 64.3 177 28.8
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 4.3e-07 60.1 277 23.8
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 1.2e-06 58.5 155 29.0


User provided reference genes

Program Settings