Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 0.0e+00 1557.3 848 100.0
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 4.2e-151 539.7 851 46.1
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 3.0e-117 427.2 781 42.3
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 5.0e-88 330.1 870 34.6
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.9e-61 239.6 389 44.7
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 1.9e-55 221.9 605 35.0
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 2.1e-46 191.8 898 27.5
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 4.7e-46 190.7 885 29.0
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 1.1e-42 179.5 858 29.0
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 7.8e-41 173.3 909 27.7
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.7e-40 172.2 841 28.4
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.1e-39 169.5 247 45.7
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 1.1e-39 169.5 873 28.8
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 7.3e-39 166.8 871 28.6
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 9.6e-39 166.4 866 26.7
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 3.6e-38 164.5 862 29.5
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 2.0e-36 158.7 957 26.5
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 1.3e-35 156.0 868 28.7
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 6.4e-35 153.7 865 26.8
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 9.3e-34 149.8 881 26.4
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 1.2e-33 149.4 832 28.5
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 2.3e-32 145.2 858 28.6
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 3.9e-32 144.4 876 27.4
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 3.9e-32 144.4 872 28.1
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 3.3e-31 141.4 791 27.4
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 5.6e-31 140.6 868 28.1
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 2.1e-30 138.7 852 26.1
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 6.2e-30 137.1 859 26.3
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 2.4e-29 135.2 877 27.5
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 2.4e-29 135.2 857 26.5
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 3.1e-29 134.8 814 27.4
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 5.3e-29 134.0 872 26.8
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.2e-28 132.9 877 27.4
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.5e-28 132.5 798 29.2
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 3.4e-28 131.3 878 26.9
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 5.8e-28 130.6 260 40.0
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 9.9e-28 129.8 847 26.1
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.2e-27 128.6 896 26.9
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.8e-27 127.9 900 26.8
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 4.9e-27 127.5 844 26.5
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 3.2e-26 124.8 845 26.3
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 5.4e-26 124.0 846 25.4
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 7.1e-26 123.6 850 27.1
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 7.1e-26 123.6 849 25.6
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.5e-25 121.3 908 26.5
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 4.6e-25 120.9 859 25.3
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 7.9e-25 120.2 857 26.4
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.3e-24 119.4 214 39.7
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 1.8e-24 119.0 217 40.1
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 2.3e-24 118.6 866 24.2
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 5.1e-24 117.5 860 25.9
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 5.1e-24 117.5 881 25.2
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.5e-23 115.9 191 45.0
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 9.6e-23 113.2 940 24.5
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 2.8e-22 111.7 832 25.6
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 8.1e-22 110.2 861 25.7
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.1e-21 109.8 849 25.9
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 5.3e-21 107.5 869 26.4
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 5.3e-21 107.5 886 23.8
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 3.4e-20 104.8 917 25.7
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 3.4e-20 104.8 194 39.7
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 3.4e-20 104.8 259 33.2
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 5.8e-20 104.0 151 42.4
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 1.1e-18 99.8 870 24.1
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 1.4e-18 99.4 859 25.8
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.4e-18 99.4 868 25.0
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 3.2e-18 98.2 797 23.2
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 5.5e-18 97.4 819 26.5
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 3.5e-17 94.7 896 25.0
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 4.6e-17 94.4 916 26.3
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 7.9e-17 93.6 163 41.1
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 2.3e-16 92.0 330 32.4
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 5.1e-16 90.9 158 44.3
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 5.1e-16 90.9 851 24.7
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 6.7e-16 90.5 476 26.3
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.9e-15 89.0 551 26.3
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 4.3e-15 87.8 889 24.4
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 2.1e-14 85.5 767 25.0
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 3.7e-14 84.7 816 24.4
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 4.8e-14 84.3 805 26.7
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 4.0e-13 81.3 889 25.1
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 4.0e-13 81.3 344 26.2
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 5.3e-13 80.9 906 23.5
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.2e-12 79.7 893 23.9
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.0e-11 76.6 67 50.7
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 1.3e-11 76.3 164 35.4
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 3.8e-11 74.7 65 60.0
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 6.5e-11 73.9 113 40.7
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 5.5e-10 70.9 58 55.2
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 5.5e-10 70.9 58 55.2
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 7.1e-10 70.5 864 24.9
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 1.6e-09 69.3 927 22.8
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 1.6e-09 69.3 225 33.3
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 5.1e-08 64.3 842 23.0
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 2.5e-07 62.0 815 22.1
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 2.5e-07 62.0 108 37.0
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 3.3e-07 61.6 55 52.7
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 4.3e-07 61.2 55 52.7
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 7.4e-07 60.5 877 23.0
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 9.7e-07 60.1 88 42.0
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.3e-06 59.7 190 33.7
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 1.3e-06 59.7 130 34.6
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 1.3e-06 59.7 149 33.6
Eucgr.D00548 Eucalyptus grandis HOM05D007489 ORTHO05D008037 2.2e-06 58.9 34 82.4
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 4.8e-06 57.8 100 42.0


User provided reference genes

Program Settings