Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 1.4e-96 356.3 182 100.0
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.4e-56 223.4 173 72.8
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 5.4e-48 194.9 155 65.2
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 7.0e-48 194.5 196 55.1
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 2.7e-47 192.6 161 63.4
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 2.7e-47 192.6 209 54.1
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 3.5e-47 192.2 159 62.9
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 7.8e-47 191.0 159 64.2
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 1.3e-46 190.3 156 64.7
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 3.9e-46 188.7 183 57.4
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 5.0e-46 188.3 205 53.7
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 5.0e-46 188.3 196 56.6
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 5.0e-46 188.3 150 64.7
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 5.0e-46 188.3 163 62.6
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 6.6e-46 188.0 204 52.9
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 8.6e-46 187.6 175 60.0
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 8.6e-46 187.6 157 63.1
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 1.5e-45 186.8 188 53.7
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.5e-45 186.8 187 54.5
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 3.3e-45 185.7 162 59.9
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 3.3e-45 185.7 172 59.3
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 3.3e-45 185.7 172 59.3
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 4.3e-45 185.3 156 62.2
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 4.3e-45 185.3 156 62.2
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 5.6e-45 184.9 153 61.4
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 7.3e-45 184.5 155 60.6
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 7.3e-45 184.5 186 53.8
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 7.3e-45 184.5 197 53.8
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 7.3e-45 184.5 162 63.0
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 9.5e-45 184.1 200 52.0
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 9.5e-45 184.1 161 60.9
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 1.2e-44 183.7 152 63.8
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.2e-44 183.7 153 62.7
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 1.6e-44 183.3 102 83.3
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.6e-44 183.3 156 61.5
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 2.8e-44 182.6 166 60.2
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 3.6e-44 182.2 204 52.0
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 3.6e-44 182.2 160 61.2
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 4.7e-44 181.8 160 60.6
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 4.7e-44 181.8 152 63.2
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 6.2e-44 181.4 200 50.5
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 6.2e-44 181.4 159 62.9
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 8.1e-44 181.0 153 62.7
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 8.1e-44 181.0 153 62.7
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 8.1e-44 181.0 153 62.7
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 1.1e-43 180.6 153 60.1
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 1.1e-43 180.6 172 57.6
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 1.4e-43 180.3 163 58.9
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.8e-43 179.9 158 62.0
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.8e-43 179.9 161 60.2
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.8e-43 179.9 169 58.6
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.3e-43 179.5 157 58.6
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 2.3e-43 179.5 157 58.6
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 2.3e-43 179.5 174 57.5
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 3.1e-43 179.1 158 57.6
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 5.2e-43 178.3 153 61.4
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 6.8e-43 177.9 155 60.6
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 8.9e-43 177.6 157 61.1
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 1.2e-42 177.2 184 52.7
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.5e-42 176.8 161 59.6
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 2.0e-42 176.4 160 58.1
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 7.5e-42 174.5 159 57.2
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 7.5e-42 174.5 119 77.3
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 1.3e-41 173.7 148 61.5
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 1.7e-41 173.3 158 60.8
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 2.2e-41 172.9 160 59.4
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 3.7e-41 172.2 153 59.5
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 6.4e-41 171.4 154 59.1
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 6.4e-41 171.4 149 60.4
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 8.3e-41 171.0 157 56.7
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 1.4e-40 170.2 207 50.2
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 1.4e-40 170.2 109 71.6
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.9e-40 169.9 152 58.6
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 2.4e-40 169.5 173 54.3
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 4.1e-40 168.7 160 57.5
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 4.1e-40 168.7 207 51.7
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 1.6e-39 166.8 106 69.8
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 4.6e-39 165.2 148 60.1
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 3.9e-38 162.2 170 56.5
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 5.1e-38 161.8 148 56.1
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.5e-37 160.2 157 54.1
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 2.8e-36 156.0 176 52.8
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 4.7e-36 155.2 138 58.7
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 4.7e-36 155.2 156 53.2
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 8.1e-36 154.5 148 54.1
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 8.1e-36 154.5 195 48.7
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 1.1e-35 154.1 154 56.5
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.1e-35 152.5 152 56.6
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.1e-35 152.5 152 56.6
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 3.1e-35 152.5 159 52.2
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 5.2e-35 151.8 125 61.6
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 5.2e-35 151.8 178 53.9
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 4.4e-34 148.7 217 44.7
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 3.8e-33 145.6 201 45.3
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 4.9e-33 145.2 217 43.8
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 9.2e-32 141.0 198 44.9
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 9.2e-32 141.0 153 52.3
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.2e-31 140.6 93 71.0
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 2.7e-31 139.4 91 71.4
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 4.6e-31 138.7 124 60.5
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.0e-30 137.5 148 53.4
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 3.0e-30 136.0 131 56.5
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 1.4e-27 127.1 77 76.6
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.8e-27 126.7 77 71.4
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 3.9e-22 109.0 122 47.5
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 5.6e-21 105.1 149 42.3
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 3.6e-20 102.4 105 53.3
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 4.0e-19 99.0 162 40.7
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.5e-18 97.1 110 52.7
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.4e-16 90.5 102 41.2
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 3.2e-16 89.4 149 38.9


User provided reference genes

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