Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 6.0e-67 257.3 123 100.0
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.8e-32 141.4 104 71.2
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.1e-31 140.2 104 71.2
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 4.0e-31 138.3 94 69.1
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.3e-26 123.2 95 64.2
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 4.3e-25 118.2 95 62.1
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.8e-24 115.5 94 59.6
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.4e-23 113.2 94 61.7
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.5e-22 109.8 62 74.2
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.5e-22 109.8 87 65.5
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 2.0e-22 109.4 71 67.6
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 2.0e-22 109.4 71 67.6
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 2.0e-22 109.4 71 67.6
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 2.0e-22 109.4 88 64.8
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.0e-22 109.4 97 56.7
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 2.6e-22 109.0 95 61.1
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 4.5e-22 108.2 71 66.2
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 5.9e-22 107.8 62 72.6
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.9e-22 107.8 91 63.7
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 7.6e-22 107.5 71 66.2
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.0e-21 107.1 71 66.2
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.0e-21 107.1 86 62.8
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.0e-21 107.1 68 72.1
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.3e-21 106.7 94 54.3
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.3e-21 106.7 94 56.4
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 1.3e-21 106.7 80 61.2
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 1.3e-21 106.7 75 66.7
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.7e-21 106.3 86 61.6
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.7e-21 106.3 81 64.2
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 2.2e-21 105.9 85 58.8
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.2e-21 105.9 91 56.0
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 2.9e-21 105.5 71 64.8
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.9e-21 105.5 92 57.6
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 2.9e-21 105.5 91 53.8
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 3.8e-21 105.1 67 70.1
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 3.8e-21 105.1 87 58.6
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 5.0e-21 104.8 88 58.0
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 5.0e-21 104.8 88 58.0
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 5.0e-21 104.8 89 59.6
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 6.5e-21 104.4 65 70.8
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 6.5e-21 104.4 100 58.0
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 8.5e-21 104.0 91 61.5
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 8.5e-21 104.0 85 61.2
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 8.5e-21 104.0 94 54.3
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 8.5e-21 104.0 94 54.3
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 8.5e-21 104.0 94 54.3
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 1.1e-20 103.6 94 58.5
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 1.1e-20 103.6 94 58.5
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 1.1e-20 103.6 56 80.4
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.1e-20 103.6 95 58.9
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.1e-20 103.6 97 54.6
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 1.1e-20 103.6 81 64.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.4e-20 103.2 95 57.9
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.4e-20 103.2 95 56.8
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.4e-20 103.2 87 55.2
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.5e-20 102.4 92 56.5
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 2.5e-20 102.4 96 58.3
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 2.5e-20 102.4 59 76.3
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 3.2e-20 102.1 56 76.8
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 3.2e-20 102.1 94 54.3
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 3.2e-20 102.1 94 57.4
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 3.2e-20 102.1 79 62.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 4.2e-20 101.7 94 56.4
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.2e-20 100.9 94 53.2
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 7.2e-20 100.9 96 52.1
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 9.3e-20 100.5 86 55.8
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 9.3e-20 100.5 90 57.8
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 9.3e-20 100.5 90 57.8
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.2e-19 100.1 87 58.6
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 1.2e-19 100.1 68 69.1
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.2e-19 100.1 59 67.8
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 1.2e-19 100.1 85 55.3
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.2e-19 100.1 94 50.0
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 1.6e-19 99.8 79 58.2
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.1e-19 99.4 75 61.3
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 2.1e-19 99.4 76 65.8
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 2.7e-19 99.0 75 62.7
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 2.7e-19 99.0 83 59.0
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 3.6e-19 98.6 60 73.3
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.6e-19 98.6 66 68.2
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 6.1e-19 97.8 90 56.7
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 6.1e-19 97.8 80 63.8
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.4e-18 96.7 74 62.2
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.4e-18 96.7 94 48.9
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 1.8e-18 96.3 69 66.7
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 2.3e-18 95.9 91 60.4
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.3e-18 95.9 53 73.6
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 2.3e-18 95.9 83 57.8
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.3e-18 95.9 92 47.8
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 5.1e-18 94.7 89 58.4
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 5.1e-18 94.7 89 58.4
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 6.7e-18 94.4 65 63.1
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 6.7e-18 94.4 55 72.7
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.5e-17 93.2 53 71.7
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.5e-17 92.4 70 61.4
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 4.3e-17 91.7 55 70.9
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 5.7e-17 91.3 86 51.2
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 7.4e-17 90.9 90 53.3
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 3.7e-16 88.6 91 49.5
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 8.2e-16 87.4 82 52.4
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.5e-14 83.2 46 71.7
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.7e-11 72.4 93 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.4e-07 60.1 51 51.0
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 2.4e-07 59.3 67 46.3


User provided reference genes

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